KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10002887mg
Entry
EUTSA_v10002887mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    EUTSA_v10002887mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10002887mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     EUTSA_v10002887mg
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II AAA_29 RT_RNaseH_2
Other DBs
NCBI-GeneID: 18013765
NCBI-ProteinID: XP_006418741
UniProt: V4L4F9
LinkDB
Position
Unknown
AA seq 1107 aa
RSILSFFQKPSPTTQGLVSGDATSGGGGLRSTVKEEDVNGDDSVRSVERNVSKSVDEVRG
TDTPPEKVPRRVLPSSFKTAESAGGGASSLFSNIMHKFVKVDDRECSAERSREHVVPLHD
DSSVCTRADNVFPQCHSNNGQPQERDHAFSVSGTVGLRSVEDEGVDNDVLGPETPGMRPS
VPRLKRVLEDGMAIKENKVTALDSNKRLKMLQDPVCGDKKEVNEGTKFEWLEPSRIRDAN
RRRPDDPLYDRKTLYIPPDVFKKMSASQKQYWGVKSEYMDVVLFFKVGKFYELYELDAEV
GHKELDWKMTLSGVGKCRQVGISESGIDDAVQKLLARGYKVGRIEQLETSDQAKARGSNS
IIPRKLVQVLTPSTASEGNIGPDAVHLLAIKEVKTELEKCSNVYGFAFVDCAALRFWVGS
ISDDASCAALGALLMQVSPKEVVYESKRLSREAQKALRKYTLTGSTAVQLSPLPQVMGDT
DACGVRKVIESNGYFRGSSESWNSAVDALAECDIALSALGELINHLSRLKLEDVLKNGDI
YPYQVYRGCLRIDGQTMVNLEIFNNSCDGGPSGTLYKYLDNCVSPTGKRLLRNWICHPLK
DVGSINKRLDVVEEFTANSEIMQITGQYLHKLPDLERLLGRIKSSVQSSASVLPALLGKK
MLKQRVKAFGQIVKGFRSGIDLLLALQKESNMMKLLCKLCKLPIIVGKSGLELFLSQFEA
AIDSDFPNYQNQDVTGENAETLTILIELFIERASEWSEVIHTISCLDVLRSFAIAASLSA
GSMARPVVFPESKNTIQNQETNGPILKIQGLWHPFAVAADGQLPVPNDLLLGEAKSSSVH
PRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCETCELSLVDTIFTRLGASDRIMTG
ESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLVERVQCRMLFA
THYHPLTKEFSSHPRVTLKHMACAFRSRSSGQEPRRCDQDLVFLYRLADGACPESYGLQV
ALMAGIPNQVVETASVAAQAMKRSIGENFKSSELRSEFSSLHEEWLKTLVGISQVIHSDK
AVFEEEDVYDTLFCLWHELRSSCSVAQ
NT seq 3321 nt   +upstreamnt  +downstreamnt
agatcgattttgtctttctttcagaaaccctcgccgacgactcagggtttggtttcgggc
gatgctacaagcggcggaggaggtttacggtctactgtgaaggaagaagatgtaaacggc
gacgattcggtacgctctgtggaacgaaatgtatcgaaatctgtggatgaggtcagagga
actgatactccgccggagaaggttccgcgtcgtgtcctgccgtccagcttcaagacggct
gaatccgccggaggtggtgcttcgtcgctgttctccaatatcatgcataagtttgtaaaa
gtcgatgaccgagaatgttctgcagagaggagccgagaacatgtcgttccgcttcatgat
gattcgtccgtgtgtacgagagctgataatgtatttcctcaatgtcattccaataatggt
cagcctcaagaaagagaccatgctttcagtgtcagtgggacagttggtctaagatcagta
gaagatgaaggagtagataacgatgttcttggcccagaaacaccagggatgcgtccaagt
gttcctcgtttgaagcgagttctggaggatggaatggctatcaaggagaataaggtcact
gcattagattctaacaaaaggctgaaaatgcttcaggatccggtttgtggagacaagaaa
gaagtaaacgaaggaaccaaatttgaatggcttgagccttctcggatcagggatgccaat
agaagacggcctgatgatcccctttatgataggaagaccctatacataccacctgatgtt
ttcaaaaaaatgtctgcgtcgcagaagcaatattggggtgtcaagagtgaatatatggat
gttgtgcttttctttaaagtgggaaaattttatgagctgtatgagctagatgcagaagta
ggtcacaaggagcttgattggaagatgaccttgagcggtgtgggaaaatgcagacaggtc
ggtatctctgaaagcgggatagatgatgcagtgcaaaagctattagctcgtggatataaa
gttggacgaatcgagcagctagaaacatctgaccaagcaaaagccagaggttcaaattct
ataattccgaggaagctagttcaagtattaactccatcaacagcaagcgagggtaacatc
ggtcctgatgctgtccatcttcttgccataaaagaggtcaaaacggagctagaaaagtgt
tcaaatgtgtatggatttgctttcgttgactgtgctgccttgaggttttgggtcgggtcc
atcagtgatgatgcctcatgtgctgctcttggagctttattgatgcaggtttctccgaag
gaagtggtatatgaaagtaaacggctatcaagagaagcgcaaaaggctttaaggaaatat
acattgacaggttctacggcggtacagttgtctccacttccacaagtaatgggggataca
gatgcttgtggagtgagaaaagtgatagaatccaacggatactttagaggttcttctgaa
tcctggaactctgctgttgatgctctagctgaatgtgacattgcccttagtgcccttggg
gaactaatcaatcatctgtctaggctaaagctagaagatgtacttaagaatggggatatt
tatccatatcaagtttacaggggttgtctcaggattgatggccagacgatggtaaatctt
gaaatattcaacaatagctgtgacggtggtccttcagggaccttgtacaaatatcttgat
aactgtgttagtcccactggtaagcggctcttaaggaattggatctgccatccactgaaa
gatgtagggagcattaataaaagactcgatgtagttgaggaattcacggcaaactcagaa
attatgcaaatcactggccagtatctccataaacttccagacttggaaagactgctcgga
cgcatcaagtctagcgttcaatcatcagcctctgttttgcctgctctccttgggaaaaaa
atgctgaaacaacgagtcaaagcatttgggcaaattgtgaaagggttcagaagtggaatt
gatcttctgttggctctacagaaggaatcaaatatgatgaaattgctttgtaagctatgt
aaacttcctataatagtcggaaaaagcgggctagagttattcctatctcaatttgaagca
gccattgatagcgactttccaaattatcagaaccaagatgtgacaggggagaatgcggaa
acgctcacaatacttattgaactatttatcgaaagagccagcgaatggtctgaagtcatt
cacaccataagctgcctcgatgtcctgagatctttcgcaatcgctgcaagtctatctgct
ggaagcatggccaggcctgttgtttttcccgaatcgaaaaacacaattcagaatcaggaa
acaaatgggccaatacttaaaatccaaggactatggcatccatttgcagttgcagccgat
ggtcaattgcctgttccaaatgatttactccttggcgaggctaaaagcagcagcgtacat
cctcggtcgttgctactcacaggaccaaacatgggtggaaaatcaactcttcttcgtgcc
acatgtcttgccgttatctttgcccagcttggttgttatgtgccttgtgagacttgtgaa
ctctccctcgtagatacaatctttacaagacttggcgcatctgatcgaatcatgacagga
gagagtactttcttggtagaatgcacagagacagcgtcagttcttcagaatgcaactcag
gattcattagtaatccttgacgaacttggcagaggaactagtactttcgatggatacgcc
attgcatattccgtttttcgtcacctagtagagagagtccagtgccggatgctctttgca
acgcattaccacccactcaccaaggaattctcgtctcacccacgtgtcaccttgaaacac
atggcttgcgcattcagatcaagatcatctggtcaagaaccgcgtcgctgtgaccaagac
ttggttttcttgtaccgtttagctgatggagcttgtcctgagagctacggacttcaagtg
gctctcatggctggaataccaaaccaagtggttgagacagcatcggtcgcggctcaagcc
atgaagagatcgattggtgaaaacttcaagtcaagtgagctaaggtctgagttctcaagt
ctgcacgaagaatggctcaagacattggtgggtatctctcaagtcatccacagcgataaa
gccgtattcgaggaagaagatgtctacgacactttgttttgcttatggcatgagctcaga
tcctcttgcagtgttgcccaa

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