KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10003147mg
Entry
EUTSA_v10003147mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K13174  THO complex subunit 5
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03013  Nucleocytoplasmic transport
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10003147mg
  09122 Translation
   03013 Nucleocytoplasmic transport
    EUTSA_v10003147mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10003147mg
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10003147mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     EUTSA_v10003147mg
Spliceosome [BR:eus03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    EUTSA_v10003147mg
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 18020569
NCBI-ProteinID: XP_006403327
UniProt: V4L384
LinkDB
Position
Unknown
AA seq 823 aa
MEDGEIEEGMVTADEFPRPEVTTDTLAPPREVAEKSPLELLRESKTSVEEIVARMLTIKK
QGNHKSEIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYE
KSHYVKAIKACRDFKSKYPDIDLVPEQDFLRDAPETIKDRSLSTDSSHVLMPKRLSFELH
QRKELCKHRARLEQQKKSLLETIAERKKFLLSLPLHLKSLKKASLPVQNQLGIHHTKKLK
QHNLAELLPPPLYVIYSQLLAQKEAFEERIDLEVVGSLKDAQAYARQQSKKDSGMSNNTE
SSRLEDDGPDDDDDGQRRRKRPKKVTSKEGSDKAGLYQVHPLRILLHVYDDKIDYTKSLK
LVILKFEYLLKLNVVCVGVEGSQDGPEKNILCNLFPDDAGLEPPHQSTKLILGDGQAFDE
NRTSRPYKWVQHLAGIDILPELSPIVLGQDIHNVDSAKSDAFVPDLSLYRQQHRVQTVLQ
RIRSRKKAHLALAEQLDMLMKHELPVVNCAEAPWALHKVLCSLDSWLLIRSSASKLHSPT
LNSTEQVPEPMEIDVDGRSIPGKEDHESIREDGELPSLVTAAALTTNSNHTPSKVSDLAR
SRQLALMTKNLDSPVSKGKLPSFKKYEDDLDLVLDDDSEVDEPAGTIDAHVEALCPEKAD
NSWVDYGAREFAFVFSRKTDGGKLWKLDAKVNISMEYPLRPPLFSLSLHASTSSGNDNGT
NESDYYNELRAMEAEVNLHMLKIVPSCQENCLLSHQIRCLAMLFDYYVDDPSPDSKRGTA
TSVVDVGLCKPVDGKLLVRSFRGRDHRKMISWKDRECASGYPC
NT seq 2472 nt   +upstreamnt  +downstreamnt
atggaggacggcgaaatagaggaaggaatggtgacggccgatgagtttccgaggccggaa
gtaacgacggatactttggcaccgccgcgagaggtcgccgagaaatctccactggagttg
cttcgagagagcaaaacctccgtggaagaaatcgtcgcgaggatgctcaccatcaaaaaa
caaggaaaccataaatctgagattcgagaactcctcacacagatgttcctcaacttcgtt
aatcttcgtcaggcaaatcgcgcgattctgacggaggaagataaagtcaaggcggagacg
gaacgagcgaaagcaccagtcgatttcacgacgctgcaattgcacaatctcatgtacgag
aagagccattacgtcaaagctattaaagcttgcagagatttcaaatccaagtacccagac
atcgatctcgtccccgaacaagattttctccgagacgctcctgaaactatcaaggatcgt
tccctctcgactgatagttcccatgttttgatgcccaagaggctcagttttgagcttcat
cagcggaaagaactgtgtaagcatcgagcgagattggagcagcagaagaagagtttactg
gaaaccattgcagagcgtaagaagtttctgttgagtcttcctctacacctcaagtctcta
aagaaagcatcgcttccagtacagaaccagttgggtatacatcacacgaagaagcttaag
cagcataatctcgctgagctgcttcctcctccgctttacgtaatatactcacagctcttg
gcacaaaaggaagcttttgaagagaggattgatttggaggtagttgggagcctcaaggat
gctcaagcttatgctcggcagcaatcaaagaaggactccggtatgtctaataacacagag
agttctaggttggaggatgatggacctgatgatgatgatgatggacagaggagaagaaag
cgacctaagaaagttactagcaaagaaggttctgacaaggcagggttatatcaagtccac
cctctcagaattcttcttcacgtatatgacgataagattgactatacaaaatccctcaag
cttgtcattctcaagttcgagtacttgttgaagttgaatgttgtatgtgttggcgttgaa
gggtctcaggacggacctgagaagaacatactttgtaacttgtttccagacgatgctgga
cttgagcctcctcatcagtcgaccaagcttatccttggtgatggtcaagcatttgatgag
aacagaacttcgaggccttataaatgggtacaacatttggcggggattgacattttacca
gaattgtcaccgattgtacttggccaagatattcataacgtcgactcagctaaaagtgat
gcgtttgtgcctgatctctcattgtatcgccagcagcatagggtgcaaacagttctgcaa
agaattcgctcgcggaaaaaagcgcatctggctcttgcggagcagcttgatatgcttatg
aagcacgagttgcctgttgtaaactgcgcagaagctccttgggcattgcacaaggttctc
tgttctttagattcctggttacttatacgatcttcagctagtaagttgcactctccgact
ctgaatagtacggaacaagttccagaacctatggaaatcgatgtagatggaagatctatt
cctggtaaggaagatcacgaaagtatacgggaagacggagaacttccctctttggtcaca
gctgcagctttgacaaccaattctaatcataccccatcaaaagtatctgatctagcgagg
tccaggcagttggctttgatgacaaagaacctagattctccagttagcaaaggaaagtta
ccgagtttcaagaaatacgaggatgatttggatctagttctggatgatgatagtgaagta
gatgagccagcaggaacaatcgatgcacatgtggaagcgttgtgcccagagaaagctgat
aattcatgggtggattatggtgcgagagagtttgcgtttgtgttctcaagaaaaacagat
ggtggaaagttgtggaagttagatgcaaaggtcaatattagcatggagtatcctcttcga
cctcctttgttttctctgtctctccatgcttctacttcttccggaaatgacaacgggaca
aatgaaagtgactattacaatgaactacgagctatggaagcagaggtgaatcttcatatg
ctgaagatagtaccttcatgtcaagaaaactgtctcttatctcatcaaataagatgcttg
gcaatgttgttcgattattacgtggacgatccatctccagattccaaaagaggaacagcc
acaagtgtggttgatgtcggcttgtgcaagcctgtagatggtaagcttcttgtgagatca
ttcagaggaagagatcaccggaaaatgatctcttggaaggatcgagaatgcgcctcgggt
tatccatgctag

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