Eutrema salsugineum (saltwater cress): EUTSA_v10003147mg
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Entry
EUTSA_v10003147mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10003147mg
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10003147mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10003147mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10003147mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
EUTSA_v10003147mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EUTSA_v10003147mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
18020569
NCBI-ProteinID:
XP_006403327
UniProt:
V4L384
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MEDGEIEEGMVTADEFPRPEVTTDTLAPPREVAEKSPLELLRESKTSVEEIVARMLTIKK
QGNHKSEIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYE
KSHYVKAIKACRDFKSKYPDIDLVPEQDFLRDAPETIKDRSLSTDSSHVLMPKRLSFELH
QRKELCKHRARLEQQKKSLLETIAERKKFLLSLPLHLKSLKKASLPVQNQLGIHHTKKLK
QHNLAELLPPPLYVIYSQLLAQKEAFEERIDLEVVGSLKDAQAYARQQSKKDSGMSNNTE
SSRLEDDGPDDDDDGQRRRKRPKKVTSKEGSDKAGLYQVHPLRILLHVYDDKIDYTKSLK
LVILKFEYLLKLNVVCVGVEGSQDGPEKNILCNLFPDDAGLEPPHQSTKLILGDGQAFDE
NRTSRPYKWVQHLAGIDILPELSPIVLGQDIHNVDSAKSDAFVPDLSLYRQQHRVQTVLQ
RIRSRKKAHLALAEQLDMLMKHELPVVNCAEAPWALHKVLCSLDSWLLIRSSASKLHSPT
LNSTEQVPEPMEIDVDGRSIPGKEDHESIREDGELPSLVTAAALTTNSNHTPSKVSDLAR
SRQLALMTKNLDSPVSKGKLPSFKKYEDDLDLVLDDDSEVDEPAGTIDAHVEALCPEKAD
NSWVDYGAREFAFVFSRKTDGGKLWKLDAKVNISMEYPLRPPLFSLSLHASTSSGNDNGT
NESDYYNELRAMEAEVNLHMLKIVPSCQENCLLSHQIRCLAMLFDYYVDDPSPDSKRGTA
TSVVDVGLCKPVDGKLLVRSFRGRDHRKMISWKDRECASGYPC
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcgaaatagaggaaggaatggtgacggccgatgagtttccgaggccggaa
gtaacgacggatactttggcaccgccgcgagaggtcgccgagaaatctccactggagttg
cttcgagagagcaaaacctccgtggaagaaatcgtcgcgaggatgctcaccatcaaaaaa
caaggaaaccataaatctgagattcgagaactcctcacacagatgttcctcaacttcgtt
aatcttcgtcaggcaaatcgcgcgattctgacggaggaagataaagtcaaggcggagacg
gaacgagcgaaagcaccagtcgatttcacgacgctgcaattgcacaatctcatgtacgag
aagagccattacgtcaaagctattaaagcttgcagagatttcaaatccaagtacccagac
atcgatctcgtccccgaacaagattttctccgagacgctcctgaaactatcaaggatcgt
tccctctcgactgatagttcccatgttttgatgcccaagaggctcagttttgagcttcat
cagcggaaagaactgtgtaagcatcgagcgagattggagcagcagaagaagagtttactg
gaaaccattgcagagcgtaagaagtttctgttgagtcttcctctacacctcaagtctcta
aagaaagcatcgcttccagtacagaaccagttgggtatacatcacacgaagaagcttaag
cagcataatctcgctgagctgcttcctcctccgctttacgtaatatactcacagctcttg
gcacaaaaggaagcttttgaagagaggattgatttggaggtagttgggagcctcaaggat
gctcaagcttatgctcggcagcaatcaaagaaggactccggtatgtctaataacacagag
agttctaggttggaggatgatggacctgatgatgatgatgatggacagaggagaagaaag
cgacctaagaaagttactagcaaagaaggttctgacaaggcagggttatatcaagtccac
cctctcagaattcttcttcacgtatatgacgataagattgactatacaaaatccctcaag
cttgtcattctcaagttcgagtacttgttgaagttgaatgttgtatgtgttggcgttgaa
gggtctcaggacggacctgagaagaacatactttgtaacttgtttccagacgatgctgga
cttgagcctcctcatcagtcgaccaagcttatccttggtgatggtcaagcatttgatgag
aacagaacttcgaggccttataaatgggtacaacatttggcggggattgacattttacca
gaattgtcaccgattgtacttggccaagatattcataacgtcgactcagctaaaagtgat
gcgtttgtgcctgatctctcattgtatcgccagcagcatagggtgcaaacagttctgcaa
agaattcgctcgcggaaaaaagcgcatctggctcttgcggagcagcttgatatgcttatg
aagcacgagttgcctgttgtaaactgcgcagaagctccttgggcattgcacaaggttctc
tgttctttagattcctggttacttatacgatcttcagctagtaagttgcactctccgact
ctgaatagtacggaacaagttccagaacctatggaaatcgatgtagatggaagatctatt
cctggtaaggaagatcacgaaagtatacgggaagacggagaacttccctctttggtcaca
gctgcagctttgacaaccaattctaatcataccccatcaaaagtatctgatctagcgagg
tccaggcagttggctttgatgacaaagaacctagattctccagttagcaaaggaaagtta
ccgagtttcaagaaatacgaggatgatttggatctagttctggatgatgatagtgaagta
gatgagccagcaggaacaatcgatgcacatgtggaagcgttgtgcccagagaaagctgat
aattcatgggtggattatggtgcgagagagtttgcgtttgtgttctcaagaaaaacagat
ggtggaaagttgtggaagttagatgcaaaggtcaatattagcatggagtatcctcttcga
cctcctttgttttctctgtctctccatgcttctacttcttccggaaatgacaacgggaca
aatgaaagtgactattacaatgaactacgagctatggaagcagaggtgaatcttcatatg
ctgaagatagtaccttcatgtcaagaaaactgtctcttatctcatcaaataagatgcttg
gcaatgttgttcgattattacgtggacgatccatctccagattccaaaagaggaacagcc
acaagtgtggttgatgtcggcttgtgcaagcctgtagatggtaagcttcttgtgagatca
ttcagaggaagagatcaccggaaaatgatctcttggaaggatcgagaatgcgcctcgggt
tatccatgctag
DBGET
integrated database retrieval system