Eutrema salsugineum (saltwater cress): EUTSA_v10003505mg
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Entry
EUTSA_v10003505mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10003505mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EUTSA_v10003505mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EUTSA_v10003505mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
DEXQc_Suv3
T2SSE
AAA_19
Helicase_PWI
UvrD-helicase
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
18012147
NCBI-ProteinID:
XP_006394537
UniProt:
V4KWS5
LinkDB
All DBs
Position
Unknown
AA seq
2078 aa
AA seq
DB search
MLVQLPRLTSSLREPFDIDQAYLRRKTILQTLNKPRSSGSCLDEFDLARRIVHQWERASP
EVRQAYKQFIGAVVELIDREVPSDEFREVAFAAYRLFGKPAEEDSDFNNKSIAEKKLELQ
NLIGHAASDANVKKVASLARALYSIQPTHQSETYANDGGDGAEFGADLAFNLPARFLMEA
SIGERSFQDVESNDAHASFSEGWSDVNDTTKNQSARKFDLSWLRDACGQMVRESNSQLSR
DELAMAICRFLDSDKPGEEIAGDLLDLVGDSAFETVQDLIMNRKEIVDAIHHGQMILKSD
KTASNTQSRMPTYGTQVTVQTESAKQIEKLRRKEEKKNRRGAELGLESEISEANFSNLLE
ASEKKTGFEDLIGSGETNSLAVALPQGTVRKHLKGYEEVFIPPTPTAQMKPGEKLIEIKE
LDDFAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHEIKQHFR
DGYLHKNEFKIVYVAPMKALAAEVTSAFSRRLAPLNMVVKELTGDMQLTKNELEETQMIV
TTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGAVIEALVARTLRQVESTQTMIR
IVGLSATLPSYLQVAQFLRVNPDIGLFYFDSSYRPVPLAQQYIGITEHNFAARNELLNEI
CYKKVVDSIRQGHQAMIFVHSRKDTSKTAEKLVDLAQKYETLDFFTNETHPQFQLMKKDV
MKSRNKDLVKFFEAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVCTATLAWGVNLPAHTV
VIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQ
LPIESQFISSLKDNLNAEVVLGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEIIAD
PSLSLKQRAFVADAARSLDKAKMMRFDEKSGNFYCTELGRVASHFYIQYSSVETYNEMLK
RHMNESEIIDMVAHSSEFENIVVREEEQHELETLARSCCPLEVKGGPSNKHGKISILIQL
YISRGSIDSFSLVSDASYISASLARIMRALFEICLRKGWCEMTLFMLEYCKAVDRQLWPH
QHPLRQFDRDLPFDTLRKLEERGADLDRLYEMEEKDIGALIRYNPGGRLVKQHLGYFPSI
QLTATVSPITRTVLKVDLLITPDFTWKDRFHGAALRWWILIEDTENDYIYHSDLFTLTKR
MARGEPQKLSFTVPIFEPHPPQYYVHAVSDSWLQAESFFTISFHNLALPEARTSHTELLD
LKPLPVTSLGNRLYESLYKFSHFNPIQTQIFHVLYHTDNNVLVGAPTGSGKTISAELAML
RLFSTQPDMKVVYIAPLKAIVRERMNDWKKHLVAPLGKEMVEMTGDYTPDLVALLSADII
ISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLGADRGPILEVIVSRMRYISSQTERSV
RFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPIEVHIQGYPGKYYCPRMNSMNKP
AYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNVSEEDLQMVLSQIT
DQNLRHTLQFGIGLHHAGLNDHDRSAVEELFMNNKIQVLVSTSTLAWGVNLPAHLVIIKG
TEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVE
SSLKEKLHDHFNAEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTQDETVCSYL
SRLVQNTFDDLEDSGCLKVTEDNVEPMMLGTIASQYYLCYMTVSMFGSNIGPDTSLEAFL
HILAGASEYDELPVRHNEENYNKTLSEKVRYPVDKNHLDDPHVKANLLFQAHFSQLALPI
SDYNTDLKSVLDQSIRILQAMIDICANSGWLSSSLTCMRLLQMVMQGMWSDQDSSLWMIP
CMNDDLLGSLTARGILTLHQLLDVPRETLKSVTGNFPVSKLSQDLQRFPRIQMNVRLQKK
DSDGKKKPSTLEIRLEKTSKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFT
SLLITRMVLPPNITSLQDTKLILVSDCYLGFEQEHSIE
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcagcttcctcgcttgacaagctctctaagagagccattcgacatcgatcag
gcgtaccttcgccgcaaaactatactccaaactcttaataagcctcgcagctccgggagt
tgccttgatgaatttgaccttgctaggaggatagtccatcaatgggaacgagcctctcca
gaagtgcgtcaagcatacaagcagtttattggagctgtagtggagttgattgatcgggaa
gttccatcagatgagtttcgtgaggttgcttttgccgcatatcgtctgtttggcaagcca
gcggaggaggacagtgattttaataataaaagcattgccgaaaagaagttagagctgcaa
aatcttattgggcatgctgcctcagatgctaatgtaaagaaagtggcctccttagctcgg
gcactctactcaatacagcctactcatcagtctgagacatatgctaatgatggtggtgat
ggggctgagtttggtgccgaccttgccttcaatctaccagctcgttttttgatggaagca
tctattggcgaaagaagttttcaggatgttgaaagcaatgacgcacatgcatcattttct
gaaggatggagtgatgtcaacgacacgacgaagaatcaaagtgcaagaaagtttgattta
agttggcttagagatgcatgcgggcagatggttagagagagcaattcacaactgtcccgt
gatgaactggctatggctatatgcaggtttctggattcggataagcctggtgaggagata
gctggagatttgttggaccttgttggggatagtgcatttgagactgttcaagaccttatt
atgaatcggaaggagattgttgatgccatccatcatggtcagatgattctcaagtctgac
aaaacagcttcaaacacccaatctcggatgcctacctatggcacacaggttactgttcaa
acagagtctgcaaagcaaattgagaaacttcgacgtaaggaggaaaagaaaaacagacga
ggtgccgagctgggtttggagagtgaaatatcagaggccaatttttctaatctactagag
gcaagtgaaaagaaaactggatttgaggatttgatcgggtctggagaaaccaattctctt
gcagttgctcttccccaaggtactgtaaggaagcacttaaaaggatatgaggaagttttt
atcccgccaactcctaccgcacaaatgaaacctggcgagaagctgattgagataaaagaa
ttagatgacttcgctcaagctgcttttcatggttacaaatctttaaaccgtattcagagt
cgaatttttcagacagtttaccacaccaatgagaatatattggtttgtgctccaacagga
gctggaaaaacaaatatagctatgatttctgttttacatgagattaaacaacacttcaga
gatggctacttgcacaaaaacgagtttaagattgtttatgtagctcctatgaaggcattg
gcggcagaggtcacatcagcctttagtcgtcgtctcgctccattaaatatggttgtgaag
gagcttacaggggatatgcaactcaccaagaatgaacttgaagaaactcagatgatagtg
acaacaccagagaaatgggatgtcattactcgcaaaagcagtgacatgtcattgtcaatg
cttgtaaaactcttgatcattgatgaagtgcatcttctgaatgatgatagaggtgcagtg
atagaagcactagttgctcggaccctccgtcaggtggaatctactcagactatgatcaga
attgtaggcctgtcagccactttacctagctacctacaggttgctcagtttctacgagta
aatccagacattggccttttctattttgattcgagctatcgcccagttcccttggctcag
cagtatataggcattaccgagcataactttgctgctagaaacgaattgttgaatgagata
tgctacaaaaaggttgttgattcaattagacaaggtcatcaagcaatgatttttgtccat
tcccgaaaagacacttcaaaaacggccgagaaactggttgatcttgcccagaaatacgaa
actcttgattttttcacgaatgagactcatcctcagtttcaactaatgaagaaagatgtc
atgaagtccagaaataaggatcttgtcaaattcttcgaagctggcttcggtattcatcat
gctgggatgttgcgatctgatagaacacttacggagaggctgttttccgatggacttttg
aaggtgcttgtttgcactgcaactcttgcttggggtgtaaatctacctgcacacacagtc
gtaattaagggaacacaattgtatgatgccaaggctggtgggtggaaagacttgggaatg
ctagatgtcatgcagatctttggacgggctgggagaccacagtttgacaaaagtggtgag
ggaattattatcacatcccatgacaagctggcatattatcttcggctgctgacgagtcag
cttcccatagaaagtcagttcataagctccttgaaagacaatttaaacgcagaagtggtt
ttgggaactgtgactaatgttaaggaagcctgtgcttggcttggatatacatatttatca
attcggatgaagttaaatcctttggcttatggcattggatgggacgagataattgccgac
ccttctttatcattgaaacaacgagcctttgtggctgatgctgcgcgttcgctggacaaa
gctaagatgatgaggtttgatgagaaaagtggaaacttttactgtaccgagcttggacgg
gttgcaagtcacttctatattcaatattctagtgtcgaaacatacaacgaaatgttgaag
cggcacatgaatgaaagcgagattattgatatggttgcccattcttctgaatttgaaaac
attgtggtaagagaggaagagcagcatgaacttgagactcttgcacgctcttgctgtccc
ttagaagttaagggaggcccgtctaacaaacatggaaaaatttcaattctcattcagttg
tacatatctcgtgggtcaattgattcattttctctggtctctgatgcttcatatattagt
gctagtttagcacgtataatgcgtgccctgtttgagatatgcttgcgaaaaggctggtgt
gagatgactttatttatgttggaatactgcaaggcagttgaccgtcaactgtggcctcat
caacatcctcttcggcaatttgatagggatctaccttttgatacactgagaaaacttgaa
gagcgaggggctgacttagaccgtttatatgagatggaggaaaaagacattggagcgctc
attcgttacaatcctgggggaaggttggtcaagcaacatctaggatattttccttcaatt
cagctgacagctactgttagtccaatcacccgcactgtattgaaggtggatttgcttatt
actccagatttcacatggaaggatcgttttcatggtgctgctcttcgttggtggattctc
attgaggatacagagaatgattatatctaccattcggatcttttcacactaacaaagcgg
atggctagaggggaaccgcagaagctttctttcaccgtgcctatatttgaaccacatcca
ccacaatactatgttcatgctgtttctgattcctggctgcaggcagaatctttcttcact
atctctttccataatcttgcactaccagaggcacgaacgtctcacaccgagcttctagat
ttgaaacctcttcctgtgacttctcttgggaataggttgtatgaatcgctttacaaattt
tcacatttcaatccgatacagactcagatttttcatgtgttatatcacacagacaacaat
gttcttgtaggagctccaactggaagtgggaaaactatatctgctgaacttgcaatgttg
cgtctcttcagtacacagcctgatatgaaggttgtttacatagcaccactaaaagctatt
gttcgagaaagaatgaacgattggaaaaagcatcttgttgctccacttggaaaagagatg
gttgaaatgactggagattacactcccgatttagtagctctcttgtctgcagatatcatc
atatctacccctgaaaaatgggatggcattagtcgtaattggcatactcgaagttacgtc
aaaaaggttggccttgttattttggatgagattcacttgctaggagctgacagaggaccc
atccttgaggttattgtgtctagaatgagatacatatcatcacagacagagcgctccgtt
cggtttgttggtctctctactgctctggcaaatgcaggtgatttggctgactggttgggt
gttggggagatcggacttttcaattttaaaccaagtgtcagacctgtaccaattgaagtt
catattcagggttatcctggaaagtattactgcccaaggatgaatagcatgaacaagcca
gcatatgcagccatatgtacccattcacctacaaaacctgttcttatctttgtttcatct
cgtagacagacaaggcttaccgcactggatcttattcagtttgcggcctcagacgaacat
ccacggcaatttctgaatgtgtcagaggaagacttgcagatggtcctctctcagatcact
gaccagaacctccgacatacgttgcagtttggcattggtttgcatcatgcaggtttgaat
gaccacgatagatctgcagtggaagagcttttcatgaacaataagattcaggttttggtc
tcaacaagtaccttggcatggggagtgaacctaccagctcatttagttatcataaaggga
acagaatatttcgacgggaaaaccaaaagatatgttgactttcctcttacagagatcttg
caaatgatggggcgcgcaggacgtccacagtttgatcaacatgggaaagcggttattctt
gtacatgaacctaaaaaaagcttctacaaaaagttcttgtacgaaccattcccggtagaa
agtagcctgaaagagaagttgcacgatcacttcaatgcagaaatagtctctgggacaatc
ggcaacaaagaagacgcagtgcattatcttacatggacatatttgtttcgtagactgatg
gctaatcctgcttactatgggctagaaggtactcaagatgaaacagtgtgttcctactta
tcaagattggttcaaaacacgtttgatgatcttgaagatagtggatgcctcaaagttaca
gaagataatgtggagcctatgatgctgggtacaatagcatcacagtattacctttgctac
atgaccgtgtctatgtttggttcgaatataggccccgacacatcactcgaagcatttttg
catattttggcgggagcgtctgagtatgatgagcttcctgtgcggcacaatgaggaaaat
tacaacaaaacattgtcagagaaagttcggtatcccgtggataaaaaccatttagatgat
cctcatgtgaaggcgaatctgctcttccaggcacatttttctcagttggcacttccaatc
agtgattacaacacggatctaaagtcagtcttggaccaaagcattcgaatcctccaggcc
atgatagatatctgcgcaaacagtggatggctctcaagctcgctgacgtgcatgcgtctc
ttgcaaatggtcatgcagggcatgtggtctgatcaagattcgtcattatggatgattcca
tgcatgaatgacgatcttctaggatctctaaccgcaagaggaatactcacgctgcatcag
ctattagatgttccaagggaaactctaaaaagtgtaaccggaaatttccctgtatccaaa
ttatctcaggatctccagcgatttccgcggatccaaatgaatgtgagactccaaaagaag
gattccgatggcaagaagaagccttcgacgctggaaatcagattggagaagacatcaaag
aggaatagctcgagggcattggcccctcgattcccaaaggtgaaagacgaagcgtggtgg
ttggttcttggtgatacttcaacttccgaactctttgcagtgaagagagtttcgttcact
agtcttctaatcacacgcatggtgttacctcccaacataacctctcttcaggacacgaaa
ttaatcttggtttcggattgttatttggggttcgagcaagaacactccattgaataa
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integrated database retrieval system
