Eutrema salsugineum (saltwater cress): EUTSA_v10003521mg
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Entry
EUTSA_v10003521mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14300
nuclear pore complex protein Nup133
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10003521mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10003521mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10003521mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10003521mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EUTSA_v10003521mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
18012410
NCBI-ProteinID:
XP_006395112
UniProt:
V4KY94
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MFSPLTKRAKQSSLHDRTPRHRVAPPDSPVTPAINNRELAHRENNTSDRPATGTPAPWAP
RLSVLARVSPVNIGEKGDDTDQLKPVFVGEFPQLVRDEQTCFSRNHSHPGDICVAGGMDR
ETCLSWFITGSKLFVWSHLTTLPSRKCVALELPFGVLGNEESGSALQDGKSWLISVVPWD
TSAAAASIRSRSPVGIVMCNRKTRAVVYWSDIFSGQEPAPVTNLGSSDETGAYSSPVGRK
SSRFSKKRSNGIRSTRAGYSDLNSLITTSVSTTERLCIAIACSSNGELWQFTCSPTGVKS
NQVHLNISSSSISEGYPRSLIWRFSQGLARESCWEFFMLTDCDIHCFTVTPYPDLTVSKV
WHHEIVGTDGDSGIKKDLASQKQIWPLDLQVDDQGKLITVLVATICMDRASSSSYTQYSL
LTLQHKTESRFADGREEKVLEKQAPIQVIIPKARVEDKDFLFSMKLRVGGRPPGSAIILS
GDGTATVCYCHGNSTRLYKFDLPYDAGKVLDASVLSSTDEHEYGAWTVITEKAGVWAIPE
KAVMLGGVEPPERSLSRKGSSNERSRDESRGTPHGVDIIARRENSDLQNSGDKGNPKMGF
TRQTAHDEESEALLGLLFEDFLLSEKVDGSLEKLSQSGAFDRDGETNVFARKSKSIVDTL
AKHWTTTRGAEIVAMTVISAQLVEKQQKHEKFLHFLALSKCHEELCSKQRHSLQIIMENG
EKLAAMIQLRELQNSINQSRSARFGSPHAGSEDQVSCALWDLIQFVGERARRNTVLLMDR
DNAEVFYSKVSELEEVFYCLNKQLEYIIRVEQPLGIQVQRACELSNACVTILQTALDYKN
DHQMWYPPLEGLLPWHSQPVVCNGLWCIASFMLRLLTEASRIDISAKSDIYIHLEVLAEV
LLEACAGSTTAKLEREEEHKALLDEYWIRRDTIFDCLYQQAKEFMEADFQGVKERTEGTD
EDIFRNRCSNLLSIAKRHAGYKIMWKMCYDLNDTVLLRNLMHEGVGPQGGFSYFVFQQLY
SMKQFSKLLRLGEEFQDELLIFLKRHSDLLWLHKVFLHQFSSASDTLHALALAQNEESMI
AIEERTVSEPEDAQPTFADRKRFLNLSKIAYVADKDADFKLKVTRIEADLKLLKLQEELT
KALPSNENTRNRLFRPEELIEICLSIQGRWTAIKAFEVFAWTSISFRENHRSLLEECWRN
AVDQDDWDRLHQASTNEGWSDKETLQNLRNTALFQASKRCYGPTRVNQFDGDFAQVLPLR
RENAEDSTSSVEDVLMSHKDFAEAGKLMLTAIMLGCVEEEGIVAEDLSSPMESFNM
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgccactgacaaagagagctaagcaaagctctcttcatgacagaactccacgc
catcgagtcgctccgccggattctccagtaactccggcaattaacaatcgcgaattggct
caccgtgaaaataatacctcagatcgtcccgccactggaacccctgctccttgggctcct
cgtttgtcggttctcgccagagtttctcctgtcaacattggtgaaaaaggagatgacaca
gaccaattaaagcctgtattcgttggagaatttccgcaattggttcgagatgaacaaacc
tgcttctcgaggaatcatagtcatcctggtgatatatgtgttgccggtggaatggacaga
gaaacctgcctttcttggtttatcactggaagtaagctttttgtttggagtcacttgaca
accttaccatcaaggaaatgtgttgctcttgaacttccttttggtgttttgggaaatgaa
gagtctggtagtgctttacaagatggaaaaagctggttgattagtgttgtcccttgggat
acttctgctgctgcagcaagcatacgatctcgtagtcctgttggtattgtgatgtgtaac
agaaaaactcgagctgttgtgtactggtcagacatcttttctggtcaggaacctgcccct
gttactaatcttggatcttctgacgaaactggtgcgtatagttcacctgtaggtagaaaa
agctcgcgatttagcaagaaacgaagcaatgggattagaagcactagagcaggatatagt
gatcttaattctttgattactacctcagttagtacaactgagcgcctttgtattgctatc
gcatgcagttctaatggtgagctatggcaatttacttgtagccctacaggggtgaaaagt
aatcaagtacacttgaacatcagctcttcctccataagtgagggctatccaaggtccctg
atctggcgtttttcacaaggattggctagagagtcgtgttgggaatttttcatgttgaca
gactgtgacatacattgttttacggttacaccttatcctgatctgactgtttcgaaagtc
tggcatcatgagattgttggcactgatggggattctggtattaagaaagatttagcaagt
caaaagcaaatttggcctctagatcttcaggtggatgatcagggtaaattgattaccgtt
cttgttgccactatctgcatggaccgcgccagcagttcaagctatacacaatattctctt
ttaaccttgcaacataaaactgagtcgagatttgcagatggcagagaggaaaaagttctg
gagaaacaggctccaatccaagtcataatcccaaaagcaagagtggaggataaagacttc
ttattttctatgaaactcagagttggtggtagaccgccagggtcagctataattctttca
ggtgatggaacagccacagtctgctactgtcatggtaattctacccggctctacaagttt
gatttaccttatgatgctggcaaggtcttggatgcttcagttctttcctcaacggatgaa
catgaatatggtgcatggactgtgataactgagaaagctggagtgtgggctataccggag
aaagcagtcatgcttggtggagttgaacctccagagagaagtttgtcacgcaaagggagc
tccaatgagaggtcacgagatgagtcaaggggcacaccacatggtgttgatataattgct
agaagggagaattctgatttacagaatagtggagacaaaggaaacccgaaaatgggtttt
actcgtcaaacagcccatgatgaagagtcagaagctttgcttggtctgctctttgaggat
tttttgttatctgagaaagttgatggatctttggagaagcttagtcaatctggtgcattt
gatagggatggagagaccaatgtttttgctcgcaaaagcaaatctatagttgacacatta
gctaagcattggacaacaactagaggtgcagagatagtagcgatgactgttatatctgca
caattggtcgagaaacaacagaagcatgagaaatttctacactttcttgctctatccaaa
tgccacgaggagttgtgttctaaacagagacattctttgcaaataattatggaaaatggt
gaaaaacttgctgcaatgattcaactccgggaactgcaaaattcgattaaccagagccgc
tcagccagatttggctcgccgcatgctggctcagaggatcaagtttcatgtgcactttgg
gatcttattcaatttgtaggggaaagagcccggcgaaatacagttcttctgatggataga
gataatgctgaagttttttacagcaaggtatctgaacttgaggaagtattttattgcctg
aacaagcaactagaatacattataagagttgaacaaccactgggaattcaagtgcagaga
gcctgtgaactctcaaacgcatgtgttacaattcttcagactgccttggattacaaaaat
gatcatcagatgtggtatccaccacttgaaggtttactaccttggcattctcagcctgtt
gtgtgtaatggactgtggtgcattgcgtcttttatgcttcgtctgttaactgaggcatct
aggattgatatctctgctaaatcagatatatacatccatcttgaagtgcttgctgaagtt
ttacttgaggcttgtgcgggttctaccactgctaaattggagcgagaagaagagcataaa
gctctgcttgatgagtactggattcggcgagacaccattttcgactgtctttatcagcaa
gctaaagagtttatggaagcagattttcagggcgtcaaagaaagaaccgaaggaacagat
gaagatattttcagaaaccgttgttcaaatttgctttccattgcaaagcggcatgcagga
tataaaattatgtggaagatgtgttatgatctcaatgatactgtgctgctcagaaactta
atgcatgagggtgtgggaccacaaggagggttcagttatttcgtgttccagcaactctat
agtatgaaacagttttccaagcttctacggcttggagaagaattccaggacgagctattg
atatttctaaagcgccattctgatctgctgtggcttcataaggtgtttcttcatcaattt
tcatcggcctctgacactcttcatgcattggctctagcgcaaaatgaagagtctatgata
gctattgaagaaagaacggtgtcagaacctgaagatgcacaaccaacatttgcagaccgc
aagcggtttctgaacctttcaaagatagcatatgtggcagataaggatgctgatttcaaa
ctgaaagtgacgcgcattgaagcagacctcaagttactgaagctgcaggaggaattaact
aaagctcttccaagcaatgaaaacactagaaaccggctgttccggccagaggagctcatc
gaaatttgtctcagtatccagggccgatggacagctataaaggcattcgaggtgtttgca
tggacgagcatttcgttccgtgagaatcataggagtctcttggaagaatgctggagaaat
gctgtggatcaagacgactgggacaggctccatcaagcctctacgaatgaaggttggagc
gacaaagaaacattacagaatctaaggaacacggcgcttttccaggcttccaaaaggtgt
tatggaccaacccgagtcaaccaatttgatggcgattttgcacaagtccttcccttgaga
cgagagaacgctgaagattcaacttcttccgtagaggatgtgttgatgagccacaaagat
ttcgctgaggcggggaaactaatgttaactgcaatcatgctgggttgtgtagaagaagaa
ggtatcgtagcagaagatctctcatctccaatggagtcatttaatatgtaa
DBGET
integrated database retrieval system