Eutrema salsugineum (saltwater cress): EUTSA_v10003534mg
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Entry
EUTSA_v10003534mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EUTSA_v10003534mg
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eus02000
]
EUTSA_v10003534mg
04147 Exosome [BR:
eus04147
]
EUTSA_v10003534mg
04090 CD molecules [BR:
eus04090
]
EUTSA_v10003534mg
Enzymes [BR:
eus01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
EUTSA_v10003534mg
Transporters [BR:
eus02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
EUTSA_v10003534mg
Exosome [BR:
eus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EUTSA_v10003534mg
CD molecules [BR:
eus04090
]
Proteins
EUTSA_v10003534mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_21
AAA_16
Zeta_toxin
AAA_15
ABC_ATPase
AAA_30
AAA_23
RsgA_GTPase
DUF87
nSTAND1
DEAD
DLIC
Motif
Other DBs
NCBI-GeneID:
18011619
NCBI-ProteinID:
XP_006395367
UniProt:
V4KYY0
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MKSWGRIRSIFMHADGVDRMLMGLGLIGAVGDGFITPIIFFIMGLLLNDFGGSFSDGTFM
KVISKNAVALLYASCASWVLCFLGERQTAKMREKYLRAVLRQDVGYFDLHVTSTSDVVTS
VSSDSLVIQDVLSEKLPNFVMNVSAFVASYIAGFTMLWRFTIVGFPFIILLLIPGLMYGR
ALISISRKIREEYNEAGSIAEQAISLVRTVYAFGNERKLISKFSAALQGSVKLGLKQGLA
KGIAIGSNGITFAIWGFMTWYGSRMVMYHGAKGGTIFAVIACITYGGTTLGRGLSNFKYF
SEGIVAGERISKVIKRVPDIDSDNLKGQILEKMKGEIQFKHVKFVYPSRPETPIFNDLCL
RIPYGKTVALVGESGSGKSTVISLLQRFYDPMGGDILIDDVSIDKLQVKWLRSQMGLVSQ
EPALFATSIEENIIFGKENASMDEVEEAAKASNAHNFISQFPDGYKTQVGEKGVQMSGGQ
KQRIAIARAIIKSPKILLLDEATSALDSESEMVVQEALDNASVGRTTIVIAHRLSTIRNA
DIICVVHNGHIVETGSHEELMENLDGQYTSLVRLQQMEKKESDVNINVTVQGHKLSILSN
DLKYSPTLSTQSRSKAPSINTNLPGSIPKDKKPPVPSFKRLMAMNKPEWKHALYGCLSAA
SYGAIQPLYSYASGSMVSVYFLTSHDEIREKTKVYVLCFVGLALFTFFINIIQHYSFAYM
GEYLTKRIREKMLSKILTFEVSWFDEDENSSGAICSRLAKEANLVRSLVGERVSLLVQTI
SAVATACTLGLAIAWQLAIVMIAVQPLVVVCFYAQRILLKSISKKAIEAQDESSKLAAEA
VSNIRTITSFSSQERILKLLKRVQEGPRRENVRQSWLAGIVLGTTRSLITCTSALSFWYG
GKLIASGKILSKAFFEMFTIFVSTGRVIADAGTMTTDLAKGSDAVGSVFAVLDRCTTIEP
ENPNGYLPEKIKGQISFHNVEFAYPTRQDVIIFKDFSIEINEGKSTAIVGPSGSGKSTII
GLIERFYDPLKGTVRIDGRDIKSYHLRALRQHIALVSQEPALFSGTIRENILYGGASDKI
GESEIIEAAKVANAHDFIISLSDGYDTNCGDRGVQLSGGQKQRIAIARAVLKNPSVLLLD
EATSALDSQSERVVQDALERVMVGRTSVVIAHRLSTIQTCDAIAVLDKGKVIECGNHSSL
FAKGPTGAYFSLVSLQRNLC
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttggggaaggataagatcgatttttatgcacgccgacggtgtggatcggatg
ttgatgggattagggttaatcggagccgtcggtgatggcttcattactcctattatattt
ttcatcatgggcttactactgaatgacttcggtggctctttcagcgatggaacgttcatg
aaagtcatctccaagaatgctgtagctttgctttatgcgtcttgtgcatcctgggtacta
tgtttccttggggagagacaaacagcaaagatgagagaaaaatatctaagagcagtgtta
agacaagatgtaggttactttgatcttcatgtcacaagtacttctgatgttgtcactagt
gtctctagtgacagcctcgtgatccaagacgtcctcagtgaaaagttaccaaactttgtg
atgaatgtatctgccttcgttgcaagctacatcgcgggtttcaccatgctgtggagattc
acaatcgtaggctttcctttcataatcctcctcttgatccctggacttatgtacggacga
gccctcatcagcatctcaaggaagatacgcgaagagtacaatgaggctggttctattgcc
gagcaagccatctcgctggtgcgaactgtctatgcgtttggtaatgagaggaaattaata
tcgaaattctcagctgcacttcaaggctcggtgaaactagggctgaaacaaggactagct
aaaggaatcgccattgggagtaatggtattacttttgccatttgggggttcatgacttgg
tatggaagtcggatggttatgtaccatggcgcaaaaggcggtactatctttgcagtcatc
gcatgcatcacctatggtggcacaacactcggccgaggtttgtccaatttcaaatacttc
tcggaggggattgtagcaggggagaggatatccaaagtgataaaaagagttcctgatatt
gattcagacaacttgaaaggtcagattttagagaaaatgaaaggagaaatccagtttaag
cacgtgaagtttgtgtacccgtctagacctgagactccaatctttaatgatttatgtttg
agaattccatacgggaaaactgtggctctggttggtgaaagcggatcaggaaaatcaacc
gtgatatccctcttgcagaggttctatgacccaatgggtggagacattctcattgatgat
gtatccattgataagctgcaagtgaagtggttgaggtctcagatgggtctagttagccaa
gagccagcgctctttgccacatcgatagaggaaaacataatatttggtaaagagaacgcg
tccatggatgaagtagaggaagctgcaaaggcctcaaatgctcataatttcatttctcag
tttcctgatggttacaaaactcaggttggagaaaaaggagtgcaaatgtcaggaggtcag
aagcagaggatcgcaatcgcacgtgcaataatcaaatcaccaaaaattctccttttggac
gaggcaacaagcgcattggactcagaatcagaaatggtagtccaagaagccttagacaat
gcctctgttggccgtacaactattgttattgcacatcgactctccactattcgtaacgct
gatattatctgtgtggtccataatggtcacattgtagagactggatcacacgaagagctc
atggagaatttggacggtcaatatacttctctagtccgcttacaacagatggagaagaaa
gagtcagatgtcaacatcaacgtaactgtgcaagggcataaactctcgattttgagtaat
gatttgaagtatagtccaacactttctactcaaagccggtctaaggcaccaagcattaat
accaatcttcctggttcgatacctaaggataagaagccacctgtgccatcgtttaagaga
ttaatggcgatgaataaaccagagtggaaacatgcattgtatggttgcttaagtgcagcc
tcatatggggccatacaaccactttattcatatgcttcaggatcaatggtgtcagtgtat
ttcctaacgagccatgacgagatcagggagaaaacaaaggtctacgtgctgtgttttgtt
ggtctagctctattcactttcttcatcaatattattcaacactacagttttgcttacatg
ggtgaatacctaacaaaacgtatccgagaaaagatgctctcgaagatattgacctttgaa
gtcagttggtttgatgaagacgagaactcaagcggtgcgatttgttctagactagcaaaa
gaagctaacttggtaagatcactggttggtgaacgagtgtcactgttggtacaaaccata
tcggcagtggccacagcttgcacacttggtttagccattgcttggcaattagccattgtg
atgattgctgtgcaaccacttgtcgttgtgtgcttctatgcacaacgcattctgctcaaa
agcatatccaaaaaggcaatcgaagcccaagatgagagcagcaaactagcagcagaagcc
gtctccaacatccgaaccatcacatctttctcatcacaagaacggatcttgaaactactc
aaaagggttcaagaaggtccacgtagagaaaacgtacgccaatcatggctagcagggatt
gttctagggactacccggagcctcataacatgcacttcggctttgagtttctggtacggt
ggtaaactaatcgctagtggcaagatcttatcaaaagcattctttgagatgtttaccatc
tttgtgagcacgggtcgggttattgctgatgctgggaccatgacgacggatctagccaag
ggctcagatgcggttgggtcagtgttcgcagtgttagaccgttgcacaaccattgagccg
gaaaacccaaatggttatctccctgaaaagataaagggccaaatcagtttccacaatgtg
gagtttgcttatccaacacgacaagatgtgattatattcaaggacttctccattgagatt
aacgaggggaagtcaacggccatcgttggtccaagtgggtcaggtaagtccacaataata
ggcttgatagagcggttctatgacccgttaaagggtactgtgagaatcgatggccgcgat
attaagtcataccatttgagagctcttcgtcaacatatagctctagttagccaagagcca
gcattgttctccggaacaattcgagagaatatcttgtacggaggagcatcagacaagatc
ggcgagtcggagatcatcgaggcagctaaggtagctaacgctcacgatttcatcatatca
ctatctgatggttatgacacaaactgtggagaccgaggagtacaattgtccggtggtcaa
aaacagaggatcgcgatcgctcgggctgtgttgaagaacccatcagtgttgcttctagat
gaagcaacaagtgctttggacagccaatcagagcgtgtggtgcaggacgcgctcgagcgc
gtgatggtcgggaggacgagcgtcgtgatcgcacataggctaagtacgatacaaacctgc
gacgctatagccgttttggacaaagggaaagtgatcgaatgtgggaaccactcgtccttg
tttgcaaaaggtcccacgggtgcttatttctcattggtcagtctccaaagaaatctatgt
tga
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integrated database retrieval system
