Eutrema salsugineum (saltwater cress): EUTSA_v10003565mg
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Entry
EUTSA_v10003565mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03030
DNA replication
eus03410
Base excision repair
eus03420
Nucleotide excision repair
eus03430
Mismatch repair
eus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUTSA_v10003565mg
03410 Base excision repair
EUTSA_v10003565mg
03420 Nucleotide excision repair
EUTSA_v10003565mg
03430 Mismatch repair
EUTSA_v10003565mg
03440 Homologous recombination
EUTSA_v10003565mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10003565mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10003565mg
Enzymes [BR:
eus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUTSA_v10003565mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
EUTSA_v10003565mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
EUTSA_v10003565mg
MMR (mismatch excision repair)
DNA polymerase delta complex
EUTSA_v10003565mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
18011793
NCBI-ProteinID:
XP_006394219
UniProt:
V4K0W6
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MNRAGNSKKRPPPSNTPPAGKHRATGNPTPSPPVGTLEDEFVDEDVFMDEGDEESLILRD
MEEREAVSARSSTWARPPLSPAYLSNSQNIIFQQLEIDYVIRESHKELLPGSSGQAAVIR
IFGVTREGHSVCCYVHGFEPYFYIACPPGMGPDDISHFHQILEGRMRESNKNASVPKFVR
HIEMVQKRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRGIHIDGLGMKSFQTYESNI
VFALRFMVDRDIVGGNWIEVPTGKYKKDARTLSYCQLEFHCLYSDLISHAAEGEYSKMAP
FRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGEDQPFVRNVMTLKSCAPIVGVDVM
SFETEREVLLAWRDFIRDVDPDIIIGYNICKFDLPYLIERAATLGIDEFPLLGRVKNSRV
RVRDSTFSSRQQGTRESKETTIEGRFQFDLFQAILRDYKLSSYSLNSVSAHFLSEQKEDV
HHSIITDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTGVPISFLLAR
GQSIKVLSQLLRKSKQKNLVLPNAKQSGSEQGTYEGATVLEAKTGFYEKPIATLDFASLY
PSIMMAYNLCYCTLVTPEDVRKLNLSPEQINKTPSGETFVKQSLQKGILPEILEELIAAR
KRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQM
IEQTKKFVEDKFTTLGGYEYNAEVIYGDTDSVMVQFGVSDVEAAMNLGREAAEYISGTFI
KFDKMDTKGIETVRRDNCLLVKNLVTESLHKILIDRDVPGAAEYVKNTISDLLMNRIDLS
LLVITKGLTKTGDDYEVKSAHGELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERS
EDPIYVLQNNIPIDPNYYLENQISKPLLRIFEPVLKNASKELLHGSHTRSISITTPSNSG
IMKFAKKQLSCVGCKVPISNGTLCQRCKGREAELYCKNVSQVSDLEEVFGRLWTQCQECQ
GSLHQDVLCTSRDCPIFYRRMKAQKDMAVAKQQLDRWSF
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagccggaaactccaagaagcgaccgcctccgtcgaataccccaccggcgggg
aagcatcgagccacaggtaatccgacaccctctccgccggtcggaaccctagaggatgaa
ttcgtggacgaggatgtgttcatggacgaaggggatgaggaatcgcttatccttcgggat
atggaagagcgtgaagctgtatctgcacgctcgtcgacttgggctcgacctcctctctca
cccgcttatctctcaaattctcagaacatcatttttcagcaattggagattgattatgta
attcgggagagtcacaaggagcttttaccgggttcctcagggcaagctgcagtcattagg
attttcggggtaaccagagaaggtcatagtgtgtgttgctatgttcatgggtttgagccc
tacttttacattgcttgccctcctggaatggggccagacgatatttctcatttccatcag
attcttgagggaaggatgagggaatccaataaaaatgccagcgttccgaaatttgttcgt
catatagaaatggtgcaaaagagaagcattatgtattaccagcagcaaaagtcccaaact
tttctgaagattacagttgcattgccgactatggtggctagctgtcgcggcatccttgat
agaggcatacatattgatggattgggtatgaagagcttccaaacatacgagagcaatatt
gtttttgctctccgtttcatggttgatcgcgatattgtgggaggaaattggatcgaagtg
cccactgggaaatacaagaaggatgcaagaactctgtcatactgccaattggagttccat
tgcctgtattcagatttgatcagtcatgctgcagaaggtgaatactcaaaaatggctcca
ttccgcgtgctaagtttcgatattgagtgtgcaggtcgtaaaggacactttccagaagct
aagcatgatcctgtgatccagatagcgaaccttgtaactcttcagggagaggatcaacca
tttgtacgcaatgtcatgactctgaagtcatgtgctccaatcgtaggcgtagatgtcatg
tcttttgaaacagaaagagaggtcttactggcttggagggattttattcgtgatgttgat
cctgatatcatcattggctataacatctgcaaattcgatttaccttatctgattgagaga
gctgctacactgggaatagacgagtttcctcttcttggtcgtgtgaagaacagtagggtc
cgggtcagggactcaacgttttcatcaagacagcaaggaacaagagaaagtaaagagacc
acaattgaaggacgatttcagtttgacctttttcaggcaatactcagagactacaaatta
agttcttattcgctgaattctgtctcagctcattttctttccgagcagaaagaggatgtc
caccattctataataaccgatctccagaatgggaatgcggaaaccaggaggcgtcttgct
gtttattgtttgaaggatgcatatctccctcagagacttttggacaaactgatgtatata
tataattatgtcgaaatggctcgtgtaactggtgtccctatttcttttcttcttgctaga
ggacagagtattaaggttctatctcagcttcttaggaaatctaaacagaagaacctggtt
cttccgaatgctaaacagtcggggtccgaacagggaacttatgaaggcgctactgtttta
gaagcaaaaacaggtttctatgaaaagccaattgcaactctggattttgcttcattgtac
ccttcaattatgatggcatataatctgtgctactgcaccttggtgacacctgaagatgta
cgcaaactgaatctttcacctgagcagatcaataaaactccatcaggggaaacatttgtt
aaacaaagtttacaaaagggtatacttccagagattcttgaagagcttattgctgcccgt
aaaagagctaaagcagatttaaaggaggctaaggatccgcttgagaaggctgttttagac
ggtagacaattggccttgaagatcagtgcaaactctgtatacgggtttacgggagccact
attgggcagttaccgtgcttagagatatcctcaagtgttaccagctatggtcgtcaaatg
attgaacaaacgaagaaatttgtggaagataaattcacaacattgggagggtatgaatac
aatgcagaggtcatttatggagacacggattctgtcatggtgcaatttggagtatcggat
gtagaagctgcgatgaacttggggagggaagctgcagagtatattagtggaacttttatc
aaatttgacaaaatggacaccaaaggaattgagacagtacgaagggataattgtttactg
gttaagaacctcgtgactgagagtctccacaaaatactaattgatagagatgtcccaggc
gcagctgagtatgttaagaatacaatttcggatcttctcatgaatcgtattgacttatca
cttttggtgattacgaagggtctaactaaaaccggggatgattatgaagttaaatcagct
catggtgaacttgctgaacgcatgcgtaagagggatgctgctacagcgccaaatgttggg
gatcgggtaccgtatgttattataaaagctgctaaaggtgccaaggcttatgaacggtca
gaagacccgatctacgtgcttcagaataatattcctatagacccaaattactacctggag
aatcagataagcaagccgcttcttaggatttttgagccagtcttgaaaaatgccagcaag
gaacttctccatggaagccacacgaggtcaatatcaattaccactccttcgaacagcggg
ataatgaagtttgccaagaaacaactaagttgtgttggttgcaaagttccgatcagcaat
ggaacactatgccagcgttgcaagggaagagaagccgaattatattgcaaaaacgtgtct
caggtgtcagacctagaggaggtctttggaaggctgtggacccagtgccaagagtgccaa
ggctctcttcaccaagatgtcttgtgcaccagtcgagattgtccaatattttaccggaga
atgaaagcacaaaaagacatggctgtggccaagcaacaactcgaccgttggagcttctaa
DBGET
integrated database retrieval system
