Eutrema salsugineum (saltwater cress): EUTSA_v10003618mg
Help
Entry
EUTSA_v10003618mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
eus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10003618mg
03460 Fanconi anemia pathway
EUTSA_v10003618mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10003618mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10003618mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EUTSA_v10003618mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Topoisomerases
EUTSA_v10003618mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
EUTSA_v10003618mg
FA (Fanconi anemia) pathway
EUTSA_v10003618mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
18011829
NCBI-ProteinID:
XP_006394227
UniProt:
V4KVW8
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MSRRGGGPVTVLNVAEKPSVAKSVAGILSRGSFRTREGRSRYNKIFEFDYAINGQPCRML
MTSVIGHLMELEFSDRFRKWHSCDPADLYQAPVMKHVPEDKKDIKKTLEEEARKSDWLVL
WLDCDREGENIAFEVVDVCRAVKQNLFIRRAHFSALIDREIHEAAQNLREPNQLFAQAVD
ARQEIDLRIGASFTRFQTMLLKDRFSIDSTGGEERSRVISYGPCQFPTLGFIVERYWEIQ
AHEPEEFWTINCSHESEEGLATFNWMRGHLFDYVSAVILYEMCVLEPTATVMNVPHPREK
FKYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFSSRTDLRAM
VEEQTRHPAWGPYAQRLLEPEGGHWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLNV
YELVVRHYLACVSQPAIAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPV
YEKGQQFIPTRLTLDSAVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATK
DANTRFSPTNLGEALVMGYDDMGYELWKPNLRAIMEHDMNEVSVGSKTKAEVLQTCLQQM
KACFLDARVKKAKLLETMTIFFERSNNTDEGENQTAGEVVRRCNLCHESDMALRKNRDGN
FMVGCMSYPQCRNAVWLPGPTLEASVTADVCQSCGPAPVYKIRFKFRQIGIPPGFDTNHL
GCVGGCDDILKQLIDICGTGSRSQARTAPGASSNNFQGGNIRQNNTCIHCQQRGHTSANC
PSRISGSRNPRPTTGTNPGNDETTVSCNTCGTPCALRTANTEANRGRRFFSCPSQGCNFF
AWEDSISNGSGNATAGSNSGGSGRRGRARGRGNRGGQSGGARGGGGGRGGGGTSFVSATG
EPVSGRRCFSCGDPSHFANACPNRNSNGNF
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcgaggcggtggccctgtgacagtgttaaacgtggctgagaagccctccgtg
gcgaagtcagtggcggggattctatcccgtggaagtttccggactcgggagggtaggtct
cggtacaacaaaatctttgagttcgattacgccatcaatggccagccatgtcgtatgcta
atgacctccgtcatcggtcacctgatggagcttgagttctctgatcgcttccgcaagtgg
cattcctgcgaccctgcagatctctaccaagctccggtcatgaaacacgttcccgaggac
aagaaagatattaagaagacattggaggaggaagcaaggaaaagcgattggcttgtgctg
tggcttgattgtgatagggaaggtgaaaacattgcatttgaagttgtagatgtttgtaga
gctgttaaacaaaatctttttatacggagagctcacttctctgcgttaattgacagggaa
attcacgaagcagctcaaaatctcagagagcctaatcaattatttgctcaggctgtagat
gctagacaagaaatagacctacgcattggtgcttctttcactagatttcagactatgctg
ctgaaagatcggttctctattgactccacgggtggtgaggagagaagtcgtgttataagt
tatggtccttgtcagtttcctacactcggctttattgtagagagatactgggagatccag
gcacatgaaccagaagagttttggacaatcaactgttctcacgaatcagaagaaggcctt
gccacctttaattggatgcgtggtcatctatttgattatgtttcagctgtcatattatat
gagatgtgtgtcctggaacctactgccactgtaatgaatgtcccacatccaagggaaaaa
tttaagtatcctccttatcctttgaacaccattgaacttgaaaaacgcgcttcaagatac
ttccgcctgagttcagagcatactatgaaggtggcagaagagttatatcaggctggtttc
atcagctatcctcgtacagagaccgattctttttcgagcaggaccgatttacgtgctatg
gtagaggaacaaacaagacatcctgcatggggtccatatgcacaaagactattagagcct
gagggggggcactggagaaaccctgggaatggtggtcatgatgacaaggctcaccctccc
attcacccaactaaattttcaagcggagagtctaactggagcagagatcaccttaatgta
tatgagctagttgtccgccattacctagcatgtgtttcccagccagcaattgctgctgaa
actacagttgaaattgatattgctggcgagcgcttttctgcatctgggagagcaatatta
gctaaaaattaccttgaagtgtaccgctttgaatcgtggggaggttcagtgattccagta
tacgaaaaagggcagcagtttatcccaacacgtttgactcttgattcagcagtaacaaga
ccaccaccgctattgagtgaagctgacttactaagttgtatggacaaggcaggcattggc
acggatgcgacaatgcacgaccacataaagaaactccttgatcggggttatgctacaaag
gatgctaatacgcggttttctccaactaacctgggcgaggcgcttgttatgggatatgat
gacatggggtatgaactttggaaaccaaatctcagagccatcatggaacatgatatgaat
gaagttagtgttggcagcaagactaaagctgaagttcttcaaacttgtttgcagcaaatg
aaagcttgtttcttagatgcaagagtcaaaaaagcaaagctcctagaaacaatgacaatt
ttctttgaaagatctaacaacaccgatgaaggtgaaaatcagacagctggtgaagttgtc
cggcgatgcaacctttgccacgaatcggatatggcgctcaggaagaatcgggatggcaat
ttcatggttggatgcatgagttatcctcagtgtaggaatgcagtttggcttcctggacct
acattggaagcatctgtgactgctgatgtttgtcaatcttgtggtccagctcccgtctac
aagatacgtttcaagttccgtcagattggaattccaccaggctttgatactaatcactta
ggctgtgttggtggctgtgatgacattcttaaacagttgatagacatatgtggaactgga
tcccgttctcaagcaaggacagctccaggtgcatcctcaaacaatttccaaggaggcaac
ataagacagaataatacctgcatacactgtcaacaacgaggacatacttctgctaattgt
ccctcacgaatttcaggatctcgaaatccgcgtcctactactggaacaaatccgggaaac
gatgaaactacagtatcatgtaacacttgtggaacaccatgtgctcttcgtacagccaac
acagaagctaacaggggaaggagattcttctcatgtccatcacaaggctgcaatttcttc
gcatgggaagatagcatcagcaacggaagtgggaatgcaacagcaggttctaatagcggc
ggaagcggtagacgaggccgtgctcgtggccgtggaaatagaggcggccaaagcggtgga
gcacgtggcggcggtggaggacgtggcggcggtggaacaagcttcgtctctgcaactggg
gagccagtgagtggtagaaggtgcttctcatgtggtgatccttcacattttgctaacgct
tgccctaaccgtaactctaacggtaacttttag
DBGET
integrated database retrieval system
