Eutrema salsugineum (saltwater cress): EUTSA_v10003632mg
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Entry
EUTSA_v10003632mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13192
RNA-binding protein 26
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eus01009
]
EUTSA_v10003632mg
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10003632mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10003632mg
Protein phosphatases and associated proteins [BR:
eus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
EUTSA_v10003632mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
EUTSA_v10003632mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
EUTSA_v10003632mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
Takusan
PRIMA1
RRM_PARP14_3
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
18011847
NCBI-ProteinID:
XP_006395407
UniProt:
V4KZ13
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MEISVSSPKQSVLSPPDCMSDPEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQTFS
RPYRKNYRHFENGNTFSEHEKRSQGAASGQRVQFDNQRTRSNPMFSRDTGPGRGRGSYGS
WNQRDSRFNPVDLSSHMVPGMFGGRGLAGVSAAQSARWPAFGMLPGVPNGGLDGFHHLTG
SLRPPLNASLNMGIPRQRCRDFEERGFCLRGDMCPMEHGINRIVVDDVQSLSQFNLPVSA
PGAPHLAASSKPVPAQFGCANFMNTKGAHGKINEGGMAVDGLGYGDAYPSVGGTDFYDPD
QPLWNNSAGETSGALSALNPHGIDENVALDDNNQDGPENACGIRDSKSTSQSVWGRMRGS
NSQANFKEKANAVLNSSAGLDDQLKEVSVNSSRHGKQNHVGESVSNDAMNNTRKPAQKAM
RTLFVNNVPHESNRRDLILAHFQKFGKVIDIHIPINSERAFVQFSKREEAESALRAPDAV
MGNRFIKLWWANRDSIPDNGLSTGNGAPMKGRGMTASGGQNQLPIASASKSNHASSIAKG
PAFHTGGAPSSSEQPKSVGVTSGPKVTPLQQKKAETLEQLKEELRKKQEILEQKRNEFRK
KLATYQKQGTVVKCEEADEPDAKRVKVDTASSSGAAISSPKTESSTDKKVPIQKPLSTAK
LSTETQSPDSKILKQRPYSFTTSLNTLMVNRYKLDNRTTTIKVVPPLPTGLADVAVLKEH
FSSYGEVSKVELEGSASIDSGKNQDETYNENCGACVTFVKRSAAEKAFANAKCWQEHMLQ
LVWVTRQSNQKNNSSNTNNNLSASRDHLSSKNKPTSSVSNDPKPADEVKASSSTEEPENT
NVSGEENSVDEREREANESDNGNHKSNSESIEGASKEIAASGTNEEQLEQRND
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttccgtttcctctccaaagcaaagtgtgttatctccacccgattgtatgagt
gaccctgaggagcatgagatcagcgaagaggaggatgacgatcgcaaccataagcaccgt
aggaaagaagagacgaggtctcagtccttggaacaagattcttcagaccagacattctca
cggccgtacaggaaaaattatagacattttgaaaatggcaatacgtttagtgaacatgaa
aagcggtctcaaggggcagcgtcaggacaacgtgtgcagtttgataatcaaagaacaaga
tctaacccaatgttttcaagggacactggtcctggtagaggtagaggaagttatggctct
tggaaccagcgtgattccaggtttaatcctgttgatctctcatctcatatggttccgggc
atgtttggaggaaggggactagctggtgtttcagctgctcaaagtgcacgatggcctgct
tttggaatgcttcctggagttccaaatggtggcttggatggtttccatcacttaactgga
tccctaagaccaccattaaatgcttcacttaacatgggtattcctcggcagcgatgcaga
gactttgaggaacgtggtttctgcctcagaggggacatgtgtccgatggagcatggaatc
aatcgtattgttgtcgacgatgttcagagtctatcacagttcaaccttcccgtttcagcc
cctggtgcacctcatctggcagcttcttctaaaccagtgcctgcacagtttgggtgtgct
aatttcatgaatactaaaggagctcatgggaagattaacgagggtggaatggctgttgat
ggcttgggttatggtgatgcatatcctagtgtaggtggaactgatttttacgatcctgat
caacctttgtggaataacagtgctggtgaaacatctggggcattatctgcactaaatcct
catgggattgatgagaatgtagctctggatgacaataaccaagatggtcctgaaaatgcg
tgtggtattcgagactccaaaagcacaagtcaatcggtttggggcagaatgcgtggttct
aatagtcaagcaaattttaaagagaaagctaatgcagtattaaattcatcagctggtctt
gatgatcaattgaaggaagtctcagtaaattcatcccgccacggtaaacaaaaccatgtt
ggtgaaagtgtctcaaatgatgcgatgaacaatacaagaaaaccagcgcaaaaggcaatg
cggactctatttgtgaataatgttccccacgagagcaacagaagggacctcattcttgcc
catttccagaaatttgggaaagttattgacattcacatcccaataaatagtgagcgagca
tttgttcagttctcgaaacgcgaagaggctgaatctgctctcagggcacctgatgctgtg
atgggtaaccgctttatcaaactttggtgggcaaatagagatagtatacctgataatggg
ctgtccactggcaatggtgctccgatgaaaggtcgtggtatgactgcttctggagggcag
aaccagcttcctattgcttcagcatcaaaaagcaaccatgcatcttccattgcaaaaggc
cccgcctttcacaccggtggagctccatcatcctctgaacagcctaagtctgtgggggtc
actagtggtcccaaggttactccgcttcagcagaaaaaagcagaaactcttgagcagttg
aaggaggaacttcgaaaaaagcaggaaatactggagcagaagcgtaatgagtttcgcaaa
aagttggcgacgtatcaaaaacaaggtacggttgtcaagtgtgaggaagcagatgagcca
gatgctaagcgcgttaaagtagacacagcctctagttctggtgccgcaatctcatcacca
aaaacagagtcatcaacagataagaaagtgcctatccagaaaccactgtctactgctaaa
ctaagcacagaaacgcaatcacccgattcaaaaatcttgaagcaaagaccttattcattt
accacaagtttgaacactcttatggtaaataggtataagttagacaaccgcaccactacc
atcaaagtggttcctcctctgccaaccgggttagccgatgttgctgtcttaaaggaacat
ttttcttcttatggcgaagtctcaaaagtggaacttgaaggcagtgcatcaattgatagt
ggcaagaatcaagatgaaacatataacgaaaactgtggagcttgtgtcacatttgtgaaa
cgcagcgcagccgagaaagcgtttgctaatgcaaagtgctggcaagaacacatgttgcag
ctcgtgtgggtaacacgtcaaagcaaccaaaagaataatagtagcaatactaataataat
ctctcagcttctcgtgaccaccttagcagcaaaaacaagcccacttcttctgtttctaat
gaccctaaaccagcagatgaagtcaaagcctcctcctctacggaagaaccagagaacaca
aacgtctctggagaagaaaattctgtggatgaacgagaacgagaggccaatgaaagcgac
aatggcaaccataaaagtaacagcgagtccattgaaggagcttctaaagagattgcggcg
tcaggtaccaatgaagaacagttggaacagagaaatgattaa
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