KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10003688mg
Entry
EUTSA_v10003688mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eus03016]
    EUTSA_v10003688mg
   03029 Mitochondrial biogenesis [BR:eus03029]
    EUTSA_v10003688mg
Transfer RNA biogenesis [BR:eus03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    EUTSA_v10003688mg
Mitochondrial biogenesis [BR:eus03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    EUTSA_v10003688mg
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 TPR_24 PPR_long MRP-S27 TPR_At1g68980
Other DBs
NCBI-GeneID: 18013348
NCBI-ProteinID: XP_006395805
UniProt: V4MNF4
LinkDB
Position
Unknown
AA seq 762 aa
MFCSLRNFIHVNRRFPRHVSPCSSSLSQIRGPLCFPLSSPSQASFISCPFVWFTSFLCII
RYPFVSKSGPSSYSEDFEINWIRNVVQNDLWDDPQIEKLFDSTLAPIWVPRILVELKEDP
KLAFKFFKWSMNRNGFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFD
VLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFAR
LGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVT
YNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMK
QSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLS
DAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALI
HGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIK
ANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDY
FGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKL
KQGNVVQALALRDKMAEIGMKLDLLAYTSLVWGLSQCNQLQKARSFLEEMIGEGILPDEV
LCISVLKKHYELGCVDEAVELQSYLMKHQVLTSDNNNAVPNI
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgttctgttctcttcgcaactttattcacgttaatcgcagattccctcgccacgtaagc
ccttgttcctcttctctctctcaaattcgaggacctctctgttttcctctgtcttctccc
tctcaagcttcctttatctcgtgtcctttcgtttggttcactagctttctctgcatcatt
cgataccctttcgttagcaaaagcggtccttctagctattccgaagatttcgaaataaat
tggatccgcaacgttgttcagaatgatctatgggatgatccccaaattgagaagctgttt
gattcgacactggctccgatttgggttccaaggattctcgttgaattgaaagaagacccg
aaactagctttcaaattcttcaaatggtctatgaaccgtaatgggtttaagcacaccatt
gaatcatactgtatagtagctcacattctgttttgtgctagaatgtattatgatgctaat
cgtatccttagagagatggttttgtccaaggctgaattaaaggactgcgatgtttttgat
gttctatggtctacaaggaatgtgtgtgttcctggttttggagtgtttgatgctttgttt
agtgttttgattgaggaagatatgtttgaggaagctctccagtgtttctctaagatgaag
agatgtagggttttcccaaaaacccggtcttgcaacggtttattgcataagtttgcgaga
ttagggaagacggatgggatgaagaggtttttcaaggatatgattggcgctggttcgaaa
cccactgtgtttacttacaacataatgatagattgtatgtgtaaagaaggagatatagaa
gctgccagtggcttgtttgaagaaatgaagtttagaggtttgattccagacactgttaca
tataattctatgattgatggttatgggaaggttggtcgattagatgatacggtttacttt
ttcgaggaaatgaagagtatgagctgtgagcctgatgttataacatacaacacgctgatc
aattgtttctgtaagtttgggaaattgcctaagggtctggagtttttcagggagatgaag
caaagtgggttgaaaccgaatgttgtgagttacagcactttggttgatgctttttgcaaa
gaggatatgatgcaacaagccctgaaattttatgttgacatgagaagacttggtcttgtg
cctaatgagcatacctacacttccctcgttgatgcctattgtaaaatcggtaatctctca
gatgcttttaggctggctgatgagatgtcgcaggtgggtgtggaatggaatgtggtcact
tacactgcactgatcgatggtctttgtgatgtggagaggataaaagaagctgaagaactt
tttggcaaaatggttacagccggtgtgattccaaatcttgcaagttacactgctctgatt
catggatttgtaaaggcgaaaaacatggacagagcgttagagcttctagacgaaatgaag
gggagaggtattaaaccagatttactgctctatggaacttttatttggagtttgtgcggt
ctagagaagatcgaggccgctaaggtagtgatgaatgaaatgcaggaaaaaggaattaaa
gcaaatacgtttatctatacaacgttaatggatgcttattttaagtcggaaaacccctct
gagggattgcatctgctagaagagatgctagaacttgatatcgaggtcacagctgttacc
ttttgtgttttgattgatggattgtgcaaaaacaagttagtttctaaggctattgattat
ttcgggaggataagtaacgattttggtctacaagcaaacgcagcgatatatacagccatg
atagatggtctctgtaaagaagatcaagttgaggccgcaacaaccctttttgaacaaatg
gctcaaaaaggtctagtcccagacagaaccgcatacacatcgttaatagatgggaaattg
aagcaagggaatgtggtacaggctttggctttacgcgacaaaatggctgagattggtatg
aagcttgatttgcttgcgtacacttcattagtctggggattatcacaatgcaatcagttg
cagaaagcaagatccttcctcgaggaaatgattggggaaggaattctccctgacgaggtt
ttgtgtattagtgtcttgaagaaacactatgagcttggatgtgttgacgaagctgtagag
ttgcagagttatttgatgaagcatcaggttttgaccagtgacaacaataatgcagttcca
aacatttga

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