Eutrema salsugineum (saltwater cress): EUTSA_v10003689mg
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Entry
EUTSA_v10003689mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10003689mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
EUTSA_v10003689mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
SWI2_SNF2
Phage_capsid_4
Motif
Other DBs
NCBI-GeneID:
18013359
NCBI-ProteinID:
XP_006395810
UniProt:
V4MNF8
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MKRDFDEISEEEWSQHSFNPSRVLKRPRTPKKTRPANPSPPIESFAYRRPSTATGREESN
SSDDCVELEDLGESDTEVKVVNGEDLLLDDEEVEEEEEAKVVTRPARAGRRFVIEDEDAS
EDDFDDEVDISSSEDELGGGRGRVEDEDVVGKALQKCAKISADLRKELYGSSSVATTCDR
YSEVETSTVRIVTQTDIDEACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAILADEM
GLGKTIQAITYLTLLNHLNNDPGPHLIVCPASVLENWERELRKWCPSFTVLQYHGAARAA
YSRELNSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDK
NSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLNAED
TELITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVNMEKKQEDTYKEAIEEYRAASQA
RLLKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGA
FGFECSLERVIEEVKSYNDFRIHQLLFQFGVNDTKGTLSDKHVMLSAKCRTLAELLPSMK
QSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLL
STRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENI
YEIAKRKLVLDAAVLESGVHVDDDGDTPEKTMGEILASLLMG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgatttcgacgaaatctccgaggaggagtggtcgcagcactcgtttaaccct
tcccgagttcttaaacggccacggactccgaagaagactcgtccggcgaatccgtcgcct
ccaattgagtctttcgcgtacaggagaccgtcgacggcgactgggagagaggagagcaat
agcagtgacgattgtgttgagctagaggatttaggagaatctgatacggaggtgaaagtt
gtgaacggcgaggatttgttgttggatgatgaggaagtcgaagaagaggaagaggcaaag
gttgtgacgcggcctgctcgagctggtcggcgatttgtgattgaagatgaggatgcgagt
gaagatgattttgatgatgaggttgacattagttcgagtgaggacgaacttggcggagga
agagggagagtagaagatgaggatgtagttgggaaggctctgcaaaagtgtgccaaaatc
tctgcggatcttcggaaggagctttatggtagctcttctgtggctactacttgtgatagg
tactctgaagtggaaacgtctactgtaaggattgtcacacagactgatattgatgaagcc
tgtaaagcagaggattctgatttccagcctatactcaagccctaccagttagttggtgtt
aactttcttcttctcttgtataagaaaggaatcgaaggagccattctagccgatgagatg
ggtcttggaaagaccattcaggcaatcacatatttaaccctcctaaatcacttaaacaat
gaccctggtcctcatttgatcgtatgccctgcctctgtcttggaaaactgggagagagaa
ctcagaaaatggtgtccatcatttactgtacttcagtaccacggcgctgcgagagcagcc
tactcaagagagttgaactctttgtcaaaagctgggaagccgccgccattcaatgtgctt
cttgtgtgttattctttgtttgaacgacatagtgaacaacagaaagatgaccggaaagta
ctgaaacggtggcgctggagctgtgttttgatggatgaagcccatgcgttaaaggataag
aacagttataggtggaaaaatttgatgtctgtggccagaaatgcaaaccagcgtctgatg
cttacaggaacgcctctacaaaatgatttgcatgaactatggtcactgctcgaattcatg
ttgcctgatatatttactacagagaacgttgacttaaagaagctgttgaatgcagaagac
actgagttgattactcgaatgaaatctattctaggtcctttcatattaaggcgtttaaaa
tctgatgtcatgcagcaacttgttccaaagatacagcgggttgagtatgtcaatatggag
aaaaagcaggaagatacatataaagaagccatagaggaatatcgcgctgcttctcaagca
cggcttttgaagctttcatcaaaatccttgaattccttagccaaggcacttccaaagcgt
caaatttcaaactattttactcaattccggaagattgcaaatcatccattgttaatcagg
cgaatatacagcgacgaagatgtcattcgcattgccaggaagttacacccaatcggtgct
tttggattcgagtgctccttggaaagagtcatcgaagaagttaagagttacaacgatttc
cgtatccaccagcttttgttccaatttggagttaacgataccaaaggaactctctcagac
aaacatgttatgctttcagcaaaatgtcggacattagctgagcttctcccttcaatgaaa
caatccggccatcgtgtcctaatattcagtcagtggacatcgatgctcgatatcttagaa
tggacgctcgatgtaatcggcgttacataccgaagacttgatggcagcactcaagtcaca
gatagacaaaccatagtcgacacattcaacaacgataagtcgatattcgcttgtctgttg
tcaactcgagcaggtggacaaggtctgaatttaaccggagcagatacggttattattcac
gatatggattttaatccacagattgatcggcaagctgaggatcgatgccatcgtatcggt
caaacaaaaccagttactatcttcagactggtgacgaaatcgacggttgatgagaacatc
tacgagattgcgaagcggaaacttgttcttgatgcggcggtcctagagtccggagttcac
gtagatgacgacggagacacgcctgagaaaaccatgggagagattctcgcttctcttctc
atgggataa
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