Eutrema salsugineum (saltwater cress): EUTSA_v10003756mg
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Entry
EUTSA_v10003756mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10003756mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10003756mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10003756mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Helicases
EUTSA_v10003756mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
EUTSA_v10003756mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18012869
NCBI-ProteinID:
XP_006394423
UniProt:
V4KKI2
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MPSLALSDMKEEKKMKKKIALEATPEQDSKKGKKEAKLKLSDSDGDESEKKKSKKKEKKR
KAADVDESEGAKSDSSSELVEPETSKSEKKKSSKKVKLGVEDVEVDNPNAVSRFRISAPL
REKLKQKGIEALFPIQAMTFDMVLDGADLVGRARTGQGKTLAFVLPILESLINGPAQSKR
KNGYGRPPSVLVLLPTRELAKQVFADFEAYGGAVGLTSCCVYGGDPYQPQEYKLKRGVDI
VVGTPGRIKDHIERQNLDLSYLQFRVLDEADEMLRMGFVDDVELILGKVEDPKKVQTLLF
SATLPSWVQKIAARFLKPEKKTIDLVGNDKMKASNSVRHICLPCSKQAMSRLIPDIISCY
SSGGNTIIFTETKDQASELSGLLPGARPLHGDIQQSQREVTLAGFRKGKFSTLVATNVAA
RGLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNTGIAVMLYDSRKSGISKIEKEAGIK
FERISAPQPSDIAKAVGMEAAEKITQVCDSVVPAFMAAAKELLETSGLSAEVLLAKALAK
TAGFTEIKKRSVLTSMENSVTLLLEAGRPMYSPSAAFTTLRRFLPEDKVNSIEGLTLTAD
GQGAVFDVAQSDVDLFIAAGQKNAGSVSLEVVKELPKLQEREPMQRRFGNNRFGNNRGGR
GGRFGRGGGGGGGGRGQRW
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccttcattagctttatccgacatgaaagaggagaagaagatgaagaagaagatagcc
ttggaagccaccccagagcaggattccaagaaggggaagaaggaggcgaagctgaaactc
tccgattctgatggagatgagtctgagaagaagaagagtaagaagaaggagaagaagcgc
aaggctgcggatgtagatgaatcggagggggcgaagagcgattcaagctcggagttggtg
gagccggagacttccaagtcggagaagaagaagagcagcaagaaggtgaagctgggtgta
gaggatgtcgaggtcgataaccccaacgccgtttccaggtttcggatttcagctccgttg
agggagaagctgaagcagaagggtatcgaagcccttttcccgattcaggcgatgactttt
gatatggttctcgatggtgctgatttagttggacgcgctcgcactggtcagggtaaaaca
ttggctttcgtgttgcctatattggaatcattgatcaatggacctgctcaaagcaagagg
aagaatggatacggcaggccaccaagtgttttggtacttttacccaccagagaattggcc
aagcaggtgtttgctgactttgaggcatacggaggagcagtagggttaacttcgtgctgt
gtctatggaggtgatccctaccaacctcaggagtataaattaaagagaggtgttgacatt
gtagttgggactcctggtcgtatcaaggatcatattgaaaggcaaaaccttgatctgagc
tatctacaattccgtgttcttgatgaagctgatgaaatgttgagaatgggatttgttgat
gatgttgaacttatattagggaaggtggaggaccctaagaaggtccagacgcttctcttc
agtgctaccttgccatcatgggtgcaaaaaattgctgctaggtttcttaaaccagaaaag
aagactattgatcttgttggtaatgataaaatgaaggccagtaatagtgttagacacatt
tgtcttccctgtagtaagcaggccatgtctcggttgattcctgatattatcagttgctat
agcagtgggggtaataccataattttcactgagactaaagatcaagcttctgagctttct
ggtttgttgcctggggcaagacctttgcatggtgacatacagcaatcacaacgtgaggtt
actcttgctggatttagaaaaggtaaattttcgacattggttgctacgaacgttgctgcc
cgtggtctagatatcaatgacgtgcagttaattatccagtgtgagcctccacgtgatgtt
gaagattatatccatcgttcaggccgaactggaagagctggcaacactggaattgcggtt
atgctttatgattctagaaagtcgggcatatcaaagattgaaaaagaagctggtataaaa
tttgagcgaatttctgcgccacagcctagtgatattgccaaagctgttggtatggaagca
gctgagaaaattacacaagtctgtgacagtgtggttcctgcgtttatggcggctgccaag
gaattgttagaaacttcgggattatcagcagaagtactccttgcaaaagctcttgcaaaa
actgcgggcttcactgagattaagaaaaggtcagttctaacatcaatggagaactctgtc
acactacttcttgaagcaggcagacccatgtacagtccatcagctgcatttactacactg
aggagattcttaccggaagacaaggtaaattcgattgaagggttaactctaacagcagat
ggacagggtgcggttttcgatgttgcacaatcagacgtggacctgttcattgctgctggg
caaaagaatgctggaagtgtaagcttggaggttgttaaggagttgcctaaacttcaagag
agagaaccaatgcaaagaagatttggaaataatcggtttggtaacaacagaggaggacgc
ggtggcagatttggccgtggtggtggtggtggtggtggtggtagaggccagagatggtga
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