Eutrema salsugineum (saltwater cress): EUTSA_v10003812mg
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Entry
EUTSA_v10003812mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10003812mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
EUTSA_v10003812mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_4
LRR_Zer-1
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
18012763
NCBI-ProteinID:
XP_006394932
UniProt:
V4KXT6
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSPSPSILSVLSEDLLVRVYGFLDPACRKTWRLISREFLRVDSLSRTSIRVLRVEFLPVL
LFKYPYLSSLDLSVCPKLDDDVVLRLALDAAVSTSRLRSLNLSRATAVRARGLETLARLC
HALERVDVSHCWGFGDREAAALSVAAGLRELTMDKCLGLSDVGLARIVVGCSNLSKISLK
WCMEISDLGIDLLCKKCKNLKSLDVSYLKITNDSIRSIALLQKLEVLDMVSCPLIDDAGL
QFLENGSPSLQEIDVTRCERVSLSSLISIVRGHPDIQHVKASHCVSEISVSFLQHIKALK
HLKTLRIDGARVSDSSLLTLSSSCRSLTEIGVSRCVDVTDIGMMGLARNSLNLKTLNLAC
CEFVTDAAISAVAKSCKNLETLILESCHLITEKGLHSLGCYSKLLQELDLTDCYGVNDRG
LEYISKCSNLLRLKLGLCANISNKGIFHIGSKCSKLIELDLYRCAGFGDDGLAALSRGCK
SLNRLILSYCSELTDTGVEQIRQLEHLSHLELRGLKNVTGAGLAVIACGCKKLAYLDLKL
CENIDDSGFWALAYFSRNLRQINLCNCSVSDTALCMLMSNLTRVQDVDLVHLNRVTVEGL
EFALRACCNRLKKLKLLAPLRFLLSSELLEMLHARGCRIRWE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccttctccatccattttatccgttttgtcggaagatcttctggttcgggtctac
gggtttctagacccggcgtgtcggaaaacgtggcgactcatcagcagagagtttctccga
gtcgactcgctgagtcggacatcgatccgagtcctccgggtggagtttctcccggtgctt
ctcttcaagtacccgtatctctcctccctcgacctctccgtctgccccaaactcgacgac
gacgtcgttttgcgccttgcactagacgccgccgtttcgacatcgcgactgaggtcactg
aacctgagccgggccaccgcagtccgagccaggggactagagacgcttgcgcgtttgtgc
cacgctcttgagcgagtcgacgtgtctcactgctggggattcggcgacagggaagctgcg
gcgctttctgttgcggcggggctcagggagctgacgatggacaagtgtttgggcttaagc
gacgtcggattggctaggatcgtcgtcgggtgtagtaatctcagcaagattagcttgaaa
tggtgtatggagatctccgatcttgggattgatcttctctgcaagaaatgcaagaacttg
aaatctctcgatgtctcgtatcttaagatcacgaatgattcaatacgctccattgctttg
ctgcaaaagctcgaggttttagatatggtaagttgccctttgatagatgatgctgggtta
cagtttcttgagaatggttctccttcactacaggagattgatgtcacaaggtgtgagcgc
gtgagtttgtccagcttaatctctatagtcagaggccatcctgatattcaacacgttaaa
gccagtcactgtgtatccgaaatctctgtgagcttcttacagcacataaaagctttgaag
catctcaagactctaaggatcgatggagctcgtgtctctgattcctctcttttaaccttg
agctctagctgtagatccttgacagaaatcggagtgagcagatgcgttgatgtgacggat
attgggatgatggggcttgcacgcaacagcttaaacctgaaaaccctaaaccttgcgtgc
tgcgaatttgtgacagatgcagccatctctgctgtagctaagtcttgcaagaatctggag
actctgatattagagtcttgccatttgataaccgaaaaaggtcttcattcgctcggatgt
tactccaagcttcttcaagaacttgatcttactgattgttatggcgtaaatgacagaggg
ctggaatatatctcaaaatgttcgaatcttctaagattgaaacttgggctctgcgcaaat
atctcaaacaaagggatttttcatatcggttctaaatgttcaaagcttatagaacttgat
ctataccgctgtgctggttttggagatgacggtttagcagctttatcccgaggttgcaag
agcttgaaccgactcattctatcctactgcagtgaactaacggacactggtgttgaacaa
attcgccagctagaacatctaagccatcttgaactccgagggctaaagaatgtgaccggt
gctggtttagctgtaattgcctgtggctgcaagaaactggcttacttggacctcaaactc
tgcgagaatatcgatgactctggcttctgggcgctcgcttacttctcaagaaacctaaga
cagataaacttgtgtaattgctcggtgtctgatacggctctatgcatgttaatgagcaat
ctgactcgggttcaagacgttgacttagtccacctgaaccgtgtgactgtggaagggctt
gagtttgctctaagagcctgttgcaacaggctcaagaagcttaaacttctcgcacctctc
agattcttgctctcatctgaattgctcgagatgcttcatgctcgtggttgccgcattaga
tgggaatga
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