Eutrema salsugineum (saltwater cress): EUTSA_v10003864mg
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Entry
EUTSA_v10003864mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EUTSA_v10003864mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10003864mg
03110 Chaperones and folding catalysts [BR:
eus03110
]
EUTSA_v10003864mg
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10003864mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
EUTSA_v10003864mg
Spliceosome [BR:
eus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
EUTSA_v10003864mg
Complex C
U4/U6.U5 tri-SnRNP related factors
EUTSA_v10003864mg
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
EUTSA_v10003864mg
Chaperones and folding catalysts [BR:
eus03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
EUTSA_v10003864mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
U-box type E3
EUTSA_v10003864mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
zf-NOSIP
U-box
Rtf2
YiiD_C
Motif
Other DBs
NCBI-GeneID:
18012360
NCBI-ProteinID:
XP_006393961
UniProt:
V4KMS7
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPFYCCALTFLPFEDPVCTSDGSV
FELTTIVPYIRKFGKHPVTGAPLKGEDLIPLVFHKNSEGEYHCPVLNKVFTEFTHIVAVK
TTGNVFCYEAVKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDSKITVEFDHVKNGLK
IDDEELKKMNSDPAYNINASGDIKQMLADLGTEKAKEIALHGGGGNKARNERAAAIAAIL
ESRSKIKEGSKADEATPKQTYSVVDAASASVHGRSAAAAKAGSSDQTAARIAMHMAGDRA
PVNSKMVKSRYSSGAASRSFTSTAFTPVTENEFELIKVEKNPKKKGYVQFHTTHGDLNIE
LHCDIAPRACENFITLCERGYYNGVTFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEP
NSKLLHSGRGVVSMANSGPHTNGSQFFILYKSATHLNYKHTVFGGVVGGLATLAAMENVP
VDDSDRPLEEIKIIEANVFVNPYTEPDEEEEKEKAEKEKNEDKDIEKVGSWYSNPGSGTV
EAGAGAGGVGKYLKAKSNIATKDTSGAIDSDLATVGVSKKRKTTSASNSTGFKDFSSW
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagcacagcaaagatcgtatgttcataacgaagacggagtgggcaact
gaatggggaggcgctaaatccaaagagaatcgtactcctttcaagagtcttcctttctat
tgctgcgcgcttacgtttctgccattcgaagatcctgtgtgtacaagcgacgggagtgtt
ttcgagttaacaacgatagtgccttacattaggaaatttggaaaacatccagttacagga
gcaccattgaaaggagaagatcttattcctctcgtctttcacaaaaactctgaaggagag
tatcattgtcctgttctgaacaaagtctttactgaatttacacatatagttgctgtcaag
actaccggaaatgtattctgctacgaggcagtcaaagaattgaatattaagaccaagaat
tggaaggagcttttaaccgaagaaccattcacaagagccgatcttataacaattcagaat
cctaatgcagttgacagtaaaataacagtggaatttgaccacgttaaaaacggtttgaag
attgatgatgaagaattgaagaagatgaactcagacccagcttataatataaacgcctct
ggagatatcaagcagatgcttgcagatcttggaacagaaaaggctaaggagattgcttta
cacggtggaggtggaaacaaggcacgtaatgaaagagccgctgcaattgctgcgattcta
gagtcaaggtcgaaaatcaaagagggttctaaagcagacgaggctacaccgaagcagact
tacagtgttgttgatgctgcatctgcttcagttcatggaagaagtgctgctgcagctaaa
gctggttctagtgatcaaacagctgcaagaatagctatgcatatggctggagatagagca
cctgttaattctaaaatggttaagagccgttattcgtcgggtgctgcttctcgttctttc
acttccaccgcgtttactcctgtcaccgaaaacgaatttgaattaataaaagtcgagaaa
aacccgaaaaagaaagggtatgttcagtttcacacaacacatggcgatttgaacattgag
cttcattgcgatatagctcctagagcatgtgagaatttcatcactctctgtgaacgaggc
tactacaatggagtgacctttcacagaagcatcaggaacttcatgattcaaggcggcgat
ccaactggcacaggaaaaggaggtgaatccatttggggaaagccattcaaagacgagcca
aactcgaagctgcttcactcgggaagaggcgtagttagtatggctaatagtggtccgcat
acaaatggttctcagtttttcatcttgtacaaatcagcaacccatttaaactacaagcac
acagtgtttggtggagttgttggtggtttagcaactctagcagcaatggagaatgtacct
gtagatgatagcgaccgtccattggaggagatcaagataatcgaggcaaatgtgtttgtg
aatccatacacggagcctgatgaagaagaagaaaaagagaaagctgagaaagagaagaac
gaagacaaagacattgagaaggtcgggtcgtggtacagcaacccaggatcaggaacagta
gaagctggagccggtgccggtggtgttggaaaatacttgaaagctaagagtaatatagcc
actaaagacactagtggtgccatagactctgatcttgcaaccgttggagtgtctaagaaa
agaaaaacaacttctgcttcaaactccacaggttttaaagatttctctagctggtag
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