Eutrema salsugineum (saltwater cress): EUTSA_v10003933mg
Help
Entry
EUTSA_v10003933mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10003933mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10003933mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10003933mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EUTSA_v10003933mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
90S particles
Helicases
EUTSA_v10003933mg
Pre-60S particles
EUTSA_v10003933mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
18012959
NCBI-ProteinID:
XP_006393974
UniProt:
V4K099
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MANLDLEQHSSEKEEMKNEKKKSKKRARDESKKLKHRAMEDEEREEMTAISDEEPKKKKK
KKKKNEKVKFEEQDNGEEEVKEGDKVEESGGSGIMTNETFESLGLSDNTYKSIKEIGFSR
MTQIQAKAIPPLMMGKDVLGAARTGSGKTLAFLIPAAELLYHVRFTPRNGTGVIVICPTR
ELAIQSYGVAKELLKYHSQTVGKVIGGENRKKEAEILVKGVNLLVATPGRLLDHLENTNG
FVFKNLKFLVMDEADRILEQNFEEDMKKIIKLLPKTRQTSLFSATQTSKVEDLARVSLSS
PVYIDVDEGRKEVTNEGLEQGYCVVPSAKRLIFLLTFLKRFHGKKKIMVFFSTCKSTKFH
AELFRYIKIDCLEIRRGIDQSKRTSTFFQFIKAETGVLLCTNVAARGLDIPHVDWIVQYD
PPDDPTEYIHRVGRTARGEGAKGKALLVLTPEELQFIQYLKEKIISENYALNLSAKEAYK
TYISGYDSHSMKDVFNVHRLDLKEIAASFGFSSPPKVALKIDQRGEGGGYRSKREPVNKF
NRARGGRAGGKSKFERF
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttggatttggagcagcattcatccgaaaaggaagagatgaagaatgagaag
aagaagagtaagaaaagagcccgagacgaatcgaagaaactaaagcaccgagcgatggaa
gatgaagagagggaagaaatgacagcgataagtgatgaagaaccgaagaagaagaagaaa
aagaagaagaagaatgagaaagtgaagttcgaagaacaagacaatggagaagaagaagta
aaggaaggagacaaagtggaggaaagtggtgggagtggtataatgactaacgaaacgttt
gagtcattgggattgtctgataacacttataaatctatcaaggagattggtttttcacgc
atgactcagatacaagctaaagcaattcccccattgatgatgggaaaagatgtacttgga
gcagccaggaccggttctggaaaaaccttagcttttcttataccggctgcagagcttctc
taccatgtccggtttactcctcgcaacggaacaggtgttatcgttatttgcccaacaaga
gagctagccatccagtcatatggagtggcaaaagaacttcttaagtatcattcgcagact
gtgggaaaggttattggcggcgagaacagaaagaaagaagctgaaattcttgtgaaaggt
gttaatttgttagtagcaacccctggaagacttctcgaccaccttgaaaatacaaatgga
tttgtgttcaagaacttgaagtttcttgtaatggatgaggctgataggatactggaacag
aacttcgaagaagacatgaagaagatcattaagctcctaccaaagacaaggcagacgtcg
ttgttttccgccacacagacctccaaggttgaggatcttgctcgggtgtcactttcgtca
cctgtttatattgatgtcgatgaaggaagaaaagaggttacaaatgaaggcttggagcaa
ggttactgcgttgtgccaagtgcgaagcgtttaattttcttactcaccttcttgaagaga
tttcacgggaaaaagaaaatcatggtgtttttctccacgtgcaaatcgaccaagtttcac
gccgaactcttccgatacatcaaaatagattgccttgaaattcgaagagggatagatcag
agcaaaaggacttcaacatttttccagttcataaaggcggaaactggtgtcttgttgtgt
actaatgtcgctgcccgtggtcttgatattcctcatgtggattggattgtgcagtatgat
cccccagatgatcctacggaatatatacatagagttggtagaacagctcgtggagaagga
gcaaaagggaaggctctgcttgtcttaactccagaggagttgcagtttattcagtatctc
aaggagaagataatatctgaaaactatgcattgaacctgtcagcaaaagaagcatacaag
acttacatttcaggatatgattctcactctatgaaagatgtctttaatgttcacagacta
gatctcaaggagattgcggcttcattcggtttctcatcaccacccaaagtagctctgaag
atagatcagagaggagaaggaggcggctacagaagcaagagagaaccggttaataagttt
aacagagctcggggcggtagagccggcggtaaaagtaagttcgagcggttctaa
DBGET
integrated database retrieval system
