KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10004025mg
Entry
EUTSA_v10004025mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K11790  denticleless
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10004025mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     EUTSA_v10004025mg
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_HPS5 WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_WDR11_1st TAF1C_beta-prop WD40_RFWD3 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 18011842
NCBI-ProteinID: XP_006395412
UniProt: V4KZ16
LinkDB
Position
Unknown
AA seq 512 aa
MENSRSRSVFVDIGLRELNGFRGRKRPFFADSELICREIAGVAVEHDGIRTPPLAVSFCK
SSRNSQIFAVSDEDGHVSLFNSSKKKFASSASHQENTENARFRDWVAHYNAVFDISWIKG
DSCLLTASGDQTIKVWDVEETKCTGVLIGHTGTVKSLCSHPTNSDLLVSGSRDGCFALWD
LRCKSSSYKDEFCINSTGMVKGAHLSPLSKRIKRRKAAVSSITSVLYLKDEITIATAGAP
DSALKFWDTRKLKVPFAQASPQLDPTNTKEKRSHGIVCLSQDSSGTFLTASCKDNRIYLY
NMLQLDKGPLQSFSGCRIDSFFVRTMISPDAEHILSGSSDGNAYIWQVNKPQVDPTILKG
HDYEVTAVDWSPSEIGKVATASDDFTVRLWNIENNRCKTSNASASASRVKRRVSALSNTE
AKERLEMNKEPESPQKHSSDPDDDYTTNQPTPIIRTPETQNKKTSSLSLSSSEEEKTCER
TPETAVNSPSSVLNPPSSVKRRTIRDYFLVTP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggaaaactccagatcaagatccgttttcgtcgacattggtctaagagagctcaacgga
tttcgaggaaggaagcgaccgttcttcgcagattccgagctgatttgcagagaaatagcc
ggcgtggctgtggaacacgacgggattcggactccgccgttggccgtttcgttttgtaag
agtagtagaaattctcaaatattcgccgtgtcagatgaagatggccatgtgagtctcttt
aattcgagtaagaagaagtttgcctcttctgcatctcaccaagagaatacagagaatgcc
agattccgtgactgggttgctcattataatgcggtctttgacatttcttggatcaaggga
gatagttgtcttctgactgcttctggtgatcaaactatcaaagtatgggatgttgaggag
actaagtgtactggagtccttataggacacacaggaactgtgaaatcattgtgttcacat
ccaaccaattctgatcttctcgtctctggttcaagagatggatgttttgcgctatgggat
ttaagatgtaaaagtagctcttacaaagacgagttttgcatcaactctactggcatggtt
aaaggagctcatctatctcctctttcaaaacgaatcaaacgtcgcaaggctgctgtatca
agcattacctctgtgctttatctcaaggacgagatcacaattgccactgctggagcacca
gatagtgccttgaaattttgggacacaaggaagcttaaagttccttttgctcaagcatct
ccacagttagacccaacaaacactaaggaaaagagatcacatggcatagtttgcttgtcc
caggactcaagtggaacctttctcacagcatcgtgcaaagacaatagaatctatttatac
aacatgttgcagcttgacaaaggacctttacaatctttctctggttgccgaatagattct
tttttcgtaaggacaatgatcagtcctgatgcagaacacattttgagcggttcaagcgat
ggtaacgcttacatttggcaggttaacaagcctcaagtagatcccacaatcttaaaaggc
catgactacgaagttactgcagtagattggtctccatcagagattggtaaggtagcaaca
gcgtcagatgatttcacggtacgattgtggaacatagagaacaaccgctgcaaaacctca
aacgcatcagcgtctgcgtcaagagttaaacgcagagtatctgcactgtcaaatactgaa
gccaaagaaagacttgagatgaacaaagaacctgagagtccccaaaaacattcatcagat
ccagatgatgattatactactaatcaaccaacgcctatcatcagaactccggagactcag
aataagaagacatcatcattgtcattatcatcatcagaagaagagaaaacgtgcgagaga
acaccagaaaccgcggtcaacagcccatcatctgtcctaaaccctccttcctctgtcaaa
cgaagaaccatcagagactattttcttgtcactccctaa

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