Eutrema salsugineum (saltwater cress): EUTSA_v10004025mg
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Entry
EUTSA_v10004025mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11790
denticleless
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10004025mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
EUTSA_v10004025mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_HPS5
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_WDR11_1st
TAF1C_beta-prop
WD40_RFWD3
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
18011842
NCBI-ProteinID:
XP_006395412
UniProt:
V4KZ16
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MENSRSRSVFVDIGLRELNGFRGRKRPFFADSELICREIAGVAVEHDGIRTPPLAVSFCK
SSRNSQIFAVSDEDGHVSLFNSSKKKFASSASHQENTENARFRDWVAHYNAVFDISWIKG
DSCLLTASGDQTIKVWDVEETKCTGVLIGHTGTVKSLCSHPTNSDLLVSGSRDGCFALWD
LRCKSSSYKDEFCINSTGMVKGAHLSPLSKRIKRRKAAVSSITSVLYLKDEITIATAGAP
DSALKFWDTRKLKVPFAQASPQLDPTNTKEKRSHGIVCLSQDSSGTFLTASCKDNRIYLY
NMLQLDKGPLQSFSGCRIDSFFVRTMISPDAEHILSGSSDGNAYIWQVNKPQVDPTILKG
HDYEVTAVDWSPSEIGKVATASDDFTVRLWNIENNRCKTSNASASASRVKRRVSALSNTE
AKERLEMNKEPESPQKHSSDPDDDYTTNQPTPIIRTPETQNKKTSSLSLSSSEEEKTCER
TPETAVNSPSSVLNPPSSVKRRTIRDYFLVTP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactccagatcaagatccgttttcgtcgacattggtctaagagagctcaacgga
tttcgaggaaggaagcgaccgttcttcgcagattccgagctgatttgcagagaaatagcc
ggcgtggctgtggaacacgacgggattcggactccgccgttggccgtttcgttttgtaag
agtagtagaaattctcaaatattcgccgtgtcagatgaagatggccatgtgagtctcttt
aattcgagtaagaagaagtttgcctcttctgcatctcaccaagagaatacagagaatgcc
agattccgtgactgggttgctcattataatgcggtctttgacatttcttggatcaaggga
gatagttgtcttctgactgcttctggtgatcaaactatcaaagtatgggatgttgaggag
actaagtgtactggagtccttataggacacacaggaactgtgaaatcattgtgttcacat
ccaaccaattctgatcttctcgtctctggttcaagagatggatgttttgcgctatgggat
ttaagatgtaaaagtagctcttacaaagacgagttttgcatcaactctactggcatggtt
aaaggagctcatctatctcctctttcaaaacgaatcaaacgtcgcaaggctgctgtatca
agcattacctctgtgctttatctcaaggacgagatcacaattgccactgctggagcacca
gatagtgccttgaaattttgggacacaaggaagcttaaagttccttttgctcaagcatct
ccacagttagacccaacaaacactaaggaaaagagatcacatggcatagtttgcttgtcc
caggactcaagtggaacctttctcacagcatcgtgcaaagacaatagaatctatttatac
aacatgttgcagcttgacaaaggacctttacaatctttctctggttgccgaatagattct
tttttcgtaaggacaatgatcagtcctgatgcagaacacattttgagcggttcaagcgat
ggtaacgcttacatttggcaggttaacaagcctcaagtagatcccacaatcttaaaaggc
catgactacgaagttactgcagtagattggtctccatcagagattggtaaggtagcaaca
gcgtcagatgatttcacggtacgattgtggaacatagagaacaaccgctgcaaaacctca
aacgcatcagcgtctgcgtcaagagttaaacgcagagtatctgcactgtcaaatactgaa
gccaaagaaagacttgagatgaacaaagaacctgagagtccccaaaaacattcatcagat
ccagatgatgattatactactaatcaaccaacgcctatcatcagaactccggagactcag
aataagaagacatcatcattgtcattatcatcatcagaagaagagaaaacgtgcgagaga
acaccagaaaccgcggtcaacagcccatcatctgtcctaaaccctccttcctctgtcaaa
cgaagaaccatcagagactattttcttgtcactccctaa
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