Eutrema salsugineum (saltwater cress): EUTSA_v10004166mg
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Entry
EUTSA_v10004166mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03093
RNA polymerase sigma-I factor
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10004166mg
Transcription machinery [BR:
eus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EUTSA_v10004166mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Response_reg_2
Motif
Other DBs
NCBI-GeneID:
18011730
NCBI-ProteinID:
XP_006394670
UniProt:
V4MKJ8
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MGVVYISSSAARSPLGLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAEKQ
KEKRVVTKRKPCKTPKKPSSLDHNLAPSCSLGVDYNEAAARLESIYKLSPATSVEDDIDG
SKVKVSRRRRRKEGGEEKKVVVRNNGMKEKRLSLDKRIALKRNIQEKPLVPSAQKKVTKK
QQEEEKIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALLQVKDELQ
KSLGREPRETEIAGEINMSAAEVKRKIEIGRAARNKLIKHNLRLVLFVMNKYFQDFTNGP
KFQDLCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVR
VEIYKTKMELLFELGRLPTEDEVVERLKISPERYREVLRAAKPVFSLNSKHSVTQEEFIN
GITDVDGVGADNRRQPAILRLALDDVLDHEAEREFSYSTKVRS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtatatctcaagttcagctgcaagatctccgcttgggttaagcagcgat
cttttgacacatcggtcttctcttaaaaagccatccattgttgcgtttaaagctgatgat
tccaccaattcagctttgatcattcctagtgaacaaattttgattcccgcggaaaagcag
aaggagaagagagtagtaacaaagaggaaaccctgtaaaaccccgaaaaaaccgagttcc
ttggatcacaatttggctccttcttgctcattaggagtggactacaacgaagctgctgct
agactagaaagcatatacaagcttagtcctgcaacatcagtcgaggatgatattgatggc
tccaaagtgaaagtttcacggaggagaaggaggaaagaaggtggggaagaaaagaaagtt
gttgtaaggaataatgggatgaaggaaaagcgactgagtcttgataaacggattgctttg
aagagaaacattcaagagaaaccacttgttccttctgctcagaaaaaagtaacaaagaag
cagcaagaggaagagaagatagagaggctcgtgagggactattcagcgtctcatgatata
gtcagcttggactggaaaaaaatgaagatacctcctgttcttccatccactgaacatgct
tggttgtttaagttgatgcaacctatgaaggctcttcttcaagtgaaagatgaattgcaa
aagagtttgggaagagagccaagggaaactgaaatagctggggagatcaatatgagcgcg
gctgaagtgaaaaggaaaatcgaaattggtagagctgcaagaaacaagcttattaagcac
aatctccggcttgtattgtttgtgatgaacaaatattttcaagattttaccaacggaccg
aaatttcaagacctgtgccaagccggtatgagagggcttatcacagcaatcgaccgcttt
gagccgaaaaggaagttccgtctttcgacttatggtttgttttggataagacatgccatc
atacggtctatgacaacctcaaactttactcgtgtcccatttggacttgaatcagtgaga
gtggagatctacaaaacaaagatggaactattgtttgagctgggaaggctcccgacagag
gacgaggtagttgagagactcaagatttcacctgagagataccgtgaagtattgagggcc
gcaaaaccggttttctcactaaattcaaaacattcggttactcaagaagaattcatcaac
ggaatcacagatgttgatggcgtaggagctgataaccggagacaacctgctattctcagg
cttgctcttgatgacgtgctcgatcatgaagccgaaagagagtttagttattcgacaaag
gtacggtcttga
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