Eutrema salsugineum (saltwater cress): EUTSA_v10004515mg
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Entry
EUTSA_v10004515mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
EUTSA_v10004515mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10004515mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10004515mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
EUTSA_v10004515mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
EUTSA_v10004515mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EIPR1
WD40
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
MIOS_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
18012404
NCBI-ProteinID:
XP_006394707
UniProt:
V4KX92
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MDNSAPDSFSRSETAVTYDSPYPLYAMAFSSIRAGTPSGHRIAVGSFLEDYNNRIDILSF
DSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEISDDSTTVE
PVSVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEV
HDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
LMDSNKVVILDIRSPTVPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVA
GPSGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggataactcagctccggattccttctccagatcggaaaccgccgtcacgtacgattct
ccttatccactctacgccatggccttctcttcaatccgcgccggtactccctccggccac
cgaatcgccgtcggaagtttcctcgaggactacaacaaccgcatcgacattctctccttc
gattccgattccatgaccgtgaagcctctcccgaatctctccttcgaacatccttaccct
cccaccaagctaatgttcagccctccctctctccgtcgtccctcctccggcgatctcctc
gcttcttccggcgatttcctccgtttatgggagatcagcgacgattccaccaccgtggag
cctgtctcggtcctcaacaacagcaagacgagcgagttctgcgcgccgttgacctctttc
gattggaacgacgtggagccgaaacgactcgggacctgcagcatcgacacgacctgcacg
atttgggacatcgagaagtccgttgtggagacgcagctcatagctcacgataaagaggta
cacgacatcgcttggggagaagctagggttttcgcatcggtctccgccgatggatccgtc
aggatcttcgatctacgagacaaggaacattccaccatcatttacgagtctccccagccc
gatacgcctcttttaagactcgcttggaacaaacaagacctgagatacatggcgacgatt
ctgatggattcgaataaggttgtgatcctcgacattcgctcgccaacggtgcctgttgcg
gagctagaacggcaccaggctagcgttaacgccatagcttgggctccacagagctgcaag
cacatctgctcgggtggtgatgacacacaggctctcatttgggagcttccgactgtagct
ggacctagcggtattgatcccatgtcggtttactcagccggttcggagattaaccagttg
cagtggtcttcctcacagcctgattggattggcatcgcttttgctaacaaaatgcagctc
cttagagtttga
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