Eutrema salsugineum (saltwater cress): EUTSA_v10004561mg
Help
Entry
EUTSA_v10004561mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EUTSA_v10004561mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10004561mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10004561mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EUTSA_v10004561mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
EUTSA_v10004561mg
COMPASS/SET1 complex (yeast)
EUTSA_v10004561mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_SCAP
WDR90_beta-prop_4th
KNTC1_N
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
18012836
NCBI-ProteinID:
XP_006393814
UniProt:
V4JZV8
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MEPGAVFRDYNCRISSIDFHKTSSYMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVC
FTSQPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDR
TVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLVFAIAFGGYIRMFDARMYEKGPFEIFSVG
GDLSEANVVKFSNDGRLMLLTTMDGHIHVLDSFRGTLLSTYSVKPVAEESTLDATFSPEG
IFVVSGSGDGSTHAWGVRSGKQVHSWMSHGSEAPPVIKWAPGSPMFVTGSSELAFVIPDL
SKLPAYAIRK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaacctggcgccgttttcagagactataattgcaggatcagctcgattgactttcac
aaaacttcgagttatatggtgactgctagcgacgatgactcaattcgtctctatgatgtt
gcaagcgctacgtgtctgaagacaattaatagcaaaaagtatggggttgatcttgtttgc
ttcacttcgcaacctactactgtcatctactcttccagaaacggatgggacgactctctg
cggcttctctctttgcacgataacaagtacctgcgctacttcaaaggacatcatgacaga
gttgtttcgcttagcttgtgttctggtggggagtgcttcatctccggttctcttgatcga
actgttttgctttgggatcaaagggtggagaaatgccagggtctcttacgagtccaagga
aggcccgctgcagcatatgatgatcaagggttagtttttgcaattgcctttggtggctac
attagaatgtttgatgcccgtatgtacgaaaagggtccttttgaaatattttctgttggt
ggtgatctttctgaggcaaacgttgtgaaatttagtaatgatggaaggctaatgctgctt
acaaccatggatggccatattcatgtgcttgactcgtttcgtggaacacttctatccaca
tatagtgtgaaaccagtagctgaagaatccacattggatgcaaccttcagccctgaaggg
atatttgttgtttcaggttcaggagacggtagtacccatgcatggggtgtaaggagcgga
aaacaggttcatagttggatgagtcatggcagtgaagcacccccagtcataaaatgggct
ccaggaagtcccatgtttgtcacaggctcttctgaacttgcttttgttattcctgactta
tctaaattgccagcttatgccatccggaaatag
DBGET
integrated database retrieval system
