Eutrema salsugineum (saltwater cress): EUTSA_v10004606mg
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Entry
EUTSA_v10004606mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03460
Fanconi anemia pathway
eus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EUTSA_v10004606mg
09124 Replication and repair
03460 Fanconi anemia pathway
EUTSA_v10004606mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10004606mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10004606mg
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
EUTSA_v10004606mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
EUTSA_v10004606mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
EUTSA_v10004606mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_C
FANCL_d2
FANCL_d3
zf-rbx1
zf-RING_2
SLX1_C
zf-RING-like
PHD_NSD
RWD
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
18012871
NCBI-ProteinID:
XP_006393991
UniProt:
V4KMV7
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MKKQAFDEMQKFRSLKMIFDDFRESIGRARCEELAKSSSFYQKVYSEIEEVGWEPLRRLG
GDLTFFSFHISDKKGRAHMLEIQLNRDYPKTPPSVSADVPYMFTLEWSTSSRLKDVMHQF
QKHLDNLQEFWSVLDDIDKSLCVVDAKQPSRSSPVRRIHAGNDCILIVHINFDDPKSLPE
CRFIGPVPSAMHMNNLHMLWRRNSKKWSKEKSFPENLECILGTELPRPQGLQDEDDQQQV
DCGICYAQFLPTDVELGARSGTPTDYTCENTSCNKSFHSLCLTDWLRSITTTRQSFDVLF
GNCPYCSDPVAVKISNVNKID
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcaagcattcgatgagatgcagaagtttcggagcttgaagatgatcttcgat
gattttagagaatctataggacgtgcgagatgtgaggaattagcaaagtcgtcttcgttt
taccagaaggtttactcggagatagaggaagttggatgggaaccgctaagaagattaggt
ggagatttaacgtttttcagctttcacatttcagataagaagggaagagcacacatgtta
gagattcaactgaatagagactatcctaaaaccccaccttctgtttccgcggatgtgccg
tacatgtttactctagaatggtcaacaagctcaagattgaaggatgtgatgcaccaattc
caaaagcatctggacaatcttcaggaattttggtctgtcttggacgatatcgacaaatct
ctctgtgttgttgatgctaagcaaccatctcgttcctctcctgtccgtcgaattcatgct
ggaaacgattgcatcctcatcgttcatatcaacttcgacgaccctaaatcccttccagag
tgccggtttattggtcctgtgccttcagctatgcatatgaacaacttacatatgttatgg
agaagaaatagcaaaaaatggtcaaaggaaaaatcatttcctgagaacctcgaatgtatt
ctaggtacggagcttccaagacctcaaggtctccaagatgaagacgatcaacagcaagtt
gattgcggaatttgctatgctcagtttctacccaccgatgtggagctcggagctagaagt
gggacaccaacagactacacatgcgaaaacaccagttgcaataagtctttccatagcctt
tgcctcacagactggttaaggtctatcacaacaacaagacagtcatttgatgttctgttt
gggaactgcccttactgttcagacccagtcgcagtcaaaatcagtaacgtgaacaaaata
gattag
DBGET
integrated database retrieval system