KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10004606mg
Entry
EUTSA_v10004606mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K10606  E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03460  Fanconi anemia pathway
eus04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    EUTSA_v10004606mg
  09124 Replication and repair
   03460 Fanconi anemia pathway
    EUTSA_v10004606mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10004606mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10004606mg
Enzymes [BR:eus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     EUTSA_v10004606mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    EUTSA_v10004606mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     EUTSA_v10004606mg
SSDB
Motif
Pfam: FANCL_C FANCL_d2 FANCL_d3 zf-rbx1 zf-RING_2 SLX1_C zf-RING-like PHD_NSD RWD zf-HC5HC2H
Other DBs
NCBI-GeneID: 18012871
NCBI-ProteinID: XP_006393991
UniProt: V4KMV7
LinkDB
Position
Unknown
AA seq 321 aa
MKKQAFDEMQKFRSLKMIFDDFRESIGRARCEELAKSSSFYQKVYSEIEEVGWEPLRRLG
GDLTFFSFHISDKKGRAHMLEIQLNRDYPKTPPSVSADVPYMFTLEWSTSSRLKDVMHQF
QKHLDNLQEFWSVLDDIDKSLCVVDAKQPSRSSPVRRIHAGNDCILIVHINFDDPKSLPE
CRFIGPVPSAMHMNNLHMLWRRNSKKWSKEKSFPENLECILGTELPRPQGLQDEDDQQQV
DCGICYAQFLPTDVELGARSGTPTDYTCENTSCNKSFHSLCLTDWLRSITTTRQSFDVLF
GNCPYCSDPVAVKISNVNKID
NT seq 966 nt   +upstreamnt  +downstreamnt
atgaagaagcaagcattcgatgagatgcagaagtttcggagcttgaagatgatcttcgat
gattttagagaatctataggacgtgcgagatgtgaggaattagcaaagtcgtcttcgttt
taccagaaggtttactcggagatagaggaagttggatgggaaccgctaagaagattaggt
ggagatttaacgtttttcagctttcacatttcagataagaagggaagagcacacatgtta
gagattcaactgaatagagactatcctaaaaccccaccttctgtttccgcggatgtgccg
tacatgtttactctagaatggtcaacaagctcaagattgaaggatgtgatgcaccaattc
caaaagcatctggacaatcttcaggaattttggtctgtcttggacgatatcgacaaatct
ctctgtgttgttgatgctaagcaaccatctcgttcctctcctgtccgtcgaattcatgct
ggaaacgattgcatcctcatcgttcatatcaacttcgacgaccctaaatcccttccagag
tgccggtttattggtcctgtgccttcagctatgcatatgaacaacttacatatgttatgg
agaagaaatagcaaaaaatggtcaaaggaaaaatcatttcctgagaacctcgaatgtatt
ctaggtacggagcttccaagacctcaaggtctccaagatgaagacgatcaacagcaagtt
gattgcggaatttgctatgctcagtttctacccaccgatgtggagctcggagctagaagt
gggacaccaacagactacacatgcgaaaacaccagttgcaataagtctttccatagcctt
tgcctcacagactggttaaggtctatcacaacaacaagacagtcatttgatgttctgttt
gggaactgcccttactgttcagacccagtcgcagtcaaaatcagtaacgtgaacaaaata
gattag

DBGET integrated database retrieval system