Eutrema salsugineum (saltwater cress): EUTSA_v10005187mg
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Entry
EUTSA_v10005187mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03018
RNA degradation
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10005187mg
09123 Folding, sorting and degradation
03018 RNA degradation
EUTSA_v10005187mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10005187mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10005187mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EUTSA_v10005187mg
mRNA degradation factors
5'-3' decay
Lsm complex
EUTSA_v10005187mg
Spliceosome [BR:
eus03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
EUTSA_v10005187mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DUF150_C
Motif
Other DBs
NCBI-GeneID:
18013113
NCBI-ProteinID:
XP_006395667
UniProt:
V4KZQ0
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESVRDHDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFGQPEAV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagaaaggaaacggtgttagatttggccaagtttgtggataagggtgtgcaa
gttaagctgaccggtggtagacaagtcactggaactctcaagggctacgatcaattgctt
aaccttgttcttgatgaagcagtagagtctgttcgagatcacgatgatcctttgaagact
actgaccagacaagacgacttggtctaattgtttgccgtggaacagcggtgatgctcgtc
tcaccaactgatggcactgaagaaatcgctaaccctttcggtcaaccagaagctgtctaa
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