Eutrema salsugineum (saltwater cress): EUTSA_v10005394mg
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Entry
EUTSA_v10005394mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
eus04812
]
EUTSA_v10005394mg
Cytoskeleton proteins [BR:
eus04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
EUTSA_v10005394mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_SCAP
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
18013003
NCBI-ProteinID:
XP_006394609
UniProt:
V4K1V0
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
EFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS
EALVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDL
RKKGPIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKCHEGQIQS
LDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETSGVRCLSFNPDGKTVLCGLQESL
KIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSRTEPCMAGGAS
QSNGHPEKRSGSGRDPAVLNDNNSKTILGKVSTSQNIDPLLKETKSLGRLSVSQNPDLSK
KETKSIGRSSTSQNSDSLMKESKPLGRLPVSQNTDVAKESRTLSSTGSVPGTPHRVSLTS
VSKAPSGVSTSVSNAATSRRNFTKANPKGNPVNKAADFAPVIVLREDPRIEQATESRAEL
DIIARTMPYSLQAADTRRSPNSKINPDLPNAPVPEISESQPVEPSNISDGNTFPGGKGGM
RGAAERSINDFRYKRYGRSNSRSRMGSPPRNHDENYDLVSHKSNRDPSPTESQKGGRFQS
LVINRERRGRFSNFEGPVSNFSAGNVPASNIRPSNMLKQRGNHMPVEQGIDSPSEDNISE
DIMVKHDQFVSSMQSRLAKLQVVRRYWERNDVKNTIGSMEKMADNAVIADVLGIITERNE
ILTLDTCTSLLPILTALLGSDMDQHLSVSLDLLLKLVRMYGSPIYSSLSAPASVGVDIEA
EQRIERYSRCFVELEKVKACLPSLSRRGGLVAKSVLELNLAFQEVSS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
gaatttgtggcacattctgctgctgtcaactgtctcaagatcggaaggaaatcatccagg
gttctagtaacaggtggggaagatcacaaggtcaatctttgggctatcggtaagcccaac
gccattctgagcttgtatgggcactcgagcggaattgattcagtgacgtttgatgcttca
gaggccttagttgcagcaggagctgctagtggtacgatcaaactttgggatttggaggag
gcaaagattgttaggactctcactggtcacaggtcaaattgcatatcggtggattttcac
ccttttggtgagttttttgcgtctggctcactagacacaaacctgaagatatgggattta
agaaaaaaaggtcccatccatacttacaagggtcacactcgaggagtcaatgtactcaga
ttcaccccagatggtcgctgggttgtatctggaggagaggacaacattgtgaaggtgtgg
gatttaacagctggaaaactgttgaccgagttcaagtgtcatgaagggcaaatccaaagc
ctagattttcatcctcatgaatttctgctggcaacaggttcagctgataggactgtaaaa
ttttgggatcttgaaacattcgagctgattggttctggtggacctgagacttctggggtc
cgttgcttgagctttaatccagatggaaagacggtgctttgtggattgcaagaaagcctc
aagatattttcgtgggaaccaattagatgtcatgatggagtggatgttggatggtcaaga
ttgtcagatatgaatgttcacgagggaaagcttcttggttgctcatacaatcagagttgt
gtaggcgtgtgggttgtagatctctcgcgtactgagccatgcatggctggaggcgcttct
cagtcaaatggtcatccagagaaaagatctggctcaggaagagatccagcagttctcaat
gataataactcaaagactattcttgggaaggtatccacttcccagaacatagatccttta
ttgaaggaaacaaagtctctcggacgattatctgtttctcagaatcctgatctttcgaaa
aaagaaacaaagtccattggaaggtcatcaacatcccaaaattcagattctttgatgaag
gaatcaaagcctctcggaaggttgccagtttctcaaaatacagatgttgctaaagagtca
aggacgttgtcatccacgggaagtgtaccaggcactcctcatagggtcagtttaaccagt
gtttcaaaagcaccctcgggtgtttcgaccagtgtctctaatgctgcaacttcaaggagg
aattttacaaaagctaacccaaaggggaatcctgtcaataaggcagcagattttgctccg
gtgattgtcctcagagaagaccctagaatagagcaggcaactgaatccagagcagaactt
gatataattgcaagaaccatgccttattcgttgcaggcggctgatactcgaaggtcgcct
aatagcaaaattaatccagatctgccaaatgctccggttcccgaaatttcagagtctcag
ccagttgaaccaagtaatatctcagatgggaatacatttcctggtggcaagggtggcatg
cggggtgcagctgagcgaagcatcaatgattttagatacaagagatatggcaggagtaat
tcaaggtcacggatgggatcacctccaagaaaccacgatgaaaactatgacttggtaagc
cacaaatcaaatagagatccaagtcccactgaaagtcagaaaggaggaagattccagtca
ctcgtcataaatagggagagaagaggaagattttccaacttcgagggtcctgtttcgaat
ttttcggctggaaatgtccctgcttctaacatccgcccttcaaatatgctcaagcagaga
ggaaaccatatgccagttgaacaagggatcgattctccatctgaagataatatttctgaa
gacataatggtgaagcacgatcaatttgtcagctctatgcagtctcgtttggctaagtta
caggtagttcgtagatattgggaaaggaatgatgtaaaaaacacgataggttcgatggag
aagatggctgataatgctgttattgcggatgtcctgggtataataaccgagagaaatgag
attctgacactggatacttgtacctcccttcttcccatcttaacagctcttttagggagt
gacatggatcagcatttgagcgtttccctggatttactgctcaagttggttagaatgtat
ggttcaccaatttactcatcactgtcagctccagcatctgttggtgtagatatcgaagct
gagcaaaggatcgagcgctacagtcgttgctttgtggaactagagaaagtcaaagcttgc
cttccctctctatcaagaagaggaggtttggtggccaagtctgtgcttgaacttaaccta
gcatttcaggaagtttcatcataa
DBGET
integrated database retrieval system