KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10005394mg
Entry
EUTSA_v10005394mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:eus04812]
    EUTSA_v10005394mg
Cytoskeleton proteins [BR:eus04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     EUTSA_v10005394mg
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_SCAP ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_IFT122_1st eIF2A WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_VPS8
Other DBs
NCBI-GeneID: 18013003
NCBI-ProteinID: XP_006394609
UniProt: V4K1V0
LinkDB
Position
Unknown
AA seq 827 aa
EFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS
EALVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDL
RKKGPIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKCHEGQIQS
LDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETSGVRCLSFNPDGKTVLCGLQESL
KIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSRTEPCMAGGAS
QSNGHPEKRSGSGRDPAVLNDNNSKTILGKVSTSQNIDPLLKETKSLGRLSVSQNPDLSK
KETKSIGRSSTSQNSDSLMKESKPLGRLPVSQNTDVAKESRTLSSTGSVPGTPHRVSLTS
VSKAPSGVSTSVSNAATSRRNFTKANPKGNPVNKAADFAPVIVLREDPRIEQATESRAEL
DIIARTMPYSLQAADTRRSPNSKINPDLPNAPVPEISESQPVEPSNISDGNTFPGGKGGM
RGAAERSINDFRYKRYGRSNSRSRMGSPPRNHDENYDLVSHKSNRDPSPTESQKGGRFQS
LVINRERRGRFSNFEGPVSNFSAGNVPASNIRPSNMLKQRGNHMPVEQGIDSPSEDNISE
DIMVKHDQFVSSMQSRLAKLQVVRRYWERNDVKNTIGSMEKMADNAVIADVLGIITERNE
ILTLDTCTSLLPILTALLGSDMDQHLSVSLDLLLKLVRMYGSPIYSSLSAPASVGVDIEA
EQRIERYSRCFVELEKVKACLPSLSRRGGLVAKSVLELNLAFQEVSS
NT seq 2484 nt   +upstreamnt  +downstreamnt
gaatttgtggcacattctgctgctgtcaactgtctcaagatcggaaggaaatcatccagg
gttctagtaacaggtggggaagatcacaaggtcaatctttgggctatcggtaagcccaac
gccattctgagcttgtatgggcactcgagcggaattgattcagtgacgtttgatgcttca
gaggccttagttgcagcaggagctgctagtggtacgatcaaactttgggatttggaggag
gcaaagattgttaggactctcactggtcacaggtcaaattgcatatcggtggattttcac
ccttttggtgagttttttgcgtctggctcactagacacaaacctgaagatatgggattta
agaaaaaaaggtcccatccatacttacaagggtcacactcgaggagtcaatgtactcaga
ttcaccccagatggtcgctgggttgtatctggaggagaggacaacattgtgaaggtgtgg
gatttaacagctggaaaactgttgaccgagttcaagtgtcatgaagggcaaatccaaagc
ctagattttcatcctcatgaatttctgctggcaacaggttcagctgataggactgtaaaa
ttttgggatcttgaaacattcgagctgattggttctggtggacctgagacttctggggtc
cgttgcttgagctttaatccagatggaaagacggtgctttgtggattgcaagaaagcctc
aagatattttcgtgggaaccaattagatgtcatgatggagtggatgttggatggtcaaga
ttgtcagatatgaatgttcacgagggaaagcttcttggttgctcatacaatcagagttgt
gtaggcgtgtgggttgtagatctctcgcgtactgagccatgcatggctggaggcgcttct
cagtcaaatggtcatccagagaaaagatctggctcaggaagagatccagcagttctcaat
gataataactcaaagactattcttgggaaggtatccacttcccagaacatagatccttta
ttgaaggaaacaaagtctctcggacgattatctgtttctcagaatcctgatctttcgaaa
aaagaaacaaagtccattggaaggtcatcaacatcccaaaattcagattctttgatgaag
gaatcaaagcctctcggaaggttgccagtttctcaaaatacagatgttgctaaagagtca
aggacgttgtcatccacgggaagtgtaccaggcactcctcatagggtcagtttaaccagt
gtttcaaaagcaccctcgggtgtttcgaccagtgtctctaatgctgcaacttcaaggagg
aattttacaaaagctaacccaaaggggaatcctgtcaataaggcagcagattttgctccg
gtgattgtcctcagagaagaccctagaatagagcaggcaactgaatccagagcagaactt
gatataattgcaagaaccatgccttattcgttgcaggcggctgatactcgaaggtcgcct
aatagcaaaattaatccagatctgccaaatgctccggttcccgaaatttcagagtctcag
ccagttgaaccaagtaatatctcagatgggaatacatttcctggtggcaagggtggcatg
cggggtgcagctgagcgaagcatcaatgattttagatacaagagatatggcaggagtaat
tcaaggtcacggatgggatcacctccaagaaaccacgatgaaaactatgacttggtaagc
cacaaatcaaatagagatccaagtcccactgaaagtcagaaaggaggaagattccagtca
ctcgtcataaatagggagagaagaggaagattttccaacttcgagggtcctgtttcgaat
ttttcggctggaaatgtccctgcttctaacatccgcccttcaaatatgctcaagcagaga
ggaaaccatatgccagttgaacaagggatcgattctccatctgaagataatatttctgaa
gacataatggtgaagcacgatcaatttgtcagctctatgcagtctcgtttggctaagtta
caggtagttcgtagatattgggaaaggaatgatgtaaaaaacacgataggttcgatggag
aagatggctgataatgctgttattgcggatgtcctgggtataataaccgagagaaatgag
attctgacactggatacttgtacctcccttcttcccatcttaacagctcttttagggagt
gacatggatcagcatttgagcgtttccctggatttactgctcaagttggttagaatgtat
ggttcaccaatttactcatcactgtcagctccagcatctgttggtgtagatatcgaagct
gagcaaaggatcgagcgctacagtcgttgctttgtggaactagagaaagtcaaagcttgc
cttccctctctatcaagaagaggaggtttggtggccaagtctgtgcttgaacttaaccta
gcatttcaggaagtttcatcataa

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