KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10005519mg
Entry
EUTSA_v10005519mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus04120  Ubiquitin mediated proteolysis
eus04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    EUTSA_v10005519mg
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    EUTSA_v10005519mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10005519mg
Enzymes [BR:eus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     EUTSA_v10005519mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    EUTSA_v10005519mg
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     EUTSA_v10005519mg
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WDR55 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C EIF3I Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_NOL10_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 18012551
NCBI-ProteinID: XP_006394637
UniProt: V4KX13
LinkDB
Position
Unknown
AA seq 374 aa
MNTLHPQKQEEEEEEEEEDEAAAARYEWDISLSTVVSSSSSASDVIGAIEFDPTDNILAT
AGISRKIRFYGLPSLLRANAGISGGGGGVSFVDHTTACEYYICTPAKLSSLRWRPGSGGR
VIGSGDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGAAAVGASGSDDGTMQVW
DPRCPPEETVGVVRPAGHCRSAVCCVEFDPSGGPAVAVGCADRRGYVYDMRKLVDPALTL
QGHSKTVSYVRFLDGGTVVTAGTDGCLKMWSVEDGCVIRTYEGHVNSRNFVGLSVWRNGA
LFGCGSENNRVFVYDKRWGKPVWVDGYEPVGISSGSDKRFVSSVCWRQSGVDQCTLVAAG
SDGVLQVYVGKRKP
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaacactcttcatcctcagaagcaggaagaagaagaagaagaagaagaagaagatgaa
gcagcagcagcgagatacgaatgggatatttctctctccaccgtcgtctcttcttcctcc
tccgcctctgacgtcatcggagctattgagttcgacccgaccgataacatcctcgccacc
gccggaatttctagaaagattcgtttttacggtctcccttctctcttacgggccaacgcc
ggaatctccggaggaggaggaggagtctcattcgtcgatcataccaccgcctgcgagtat
tacatctgtacgccggcgaagctcagtagtctccgatggagacccgggtcgggcggtcgg
gtcatcgggtcgggagattacgacggcgtcgtcacggagtacgacctcgagaaaaggacg
cccgttttcgagagggacgagcacggtggccgacgcgtctggagcgtggattacacgcga
cacggtggcgccgccgctgtgggagcgtcgggatcggacgacgggactatgcaggtttgg
gatccgaggtgtccgccggaggaaactgtcggcgttgtccgaccggccggacattgccgg
agcgccgtttgttgcgttgagttcgatccttccggcggacccgcggtggccgttggatgc
gctgatcggagagggtacgtgtacgacatgaggaaactcgttgacccagcgttgactttg
caaggtcactctaaaacggtgtcgtatgtgaggttcctcgacggtggtacggtggtgacg
gcaggcacggacggatgtctgaagatgtggagcgtggaggacgggtgcgtgattcgcacg
tacgaggggcacgtgaacagtcggaacttcgtggggttgtctgtgtggagaaacggcgcg
ctgtttggttgcggatcggagaataacagggtgttcgtgtacgataagaggtgggggaag
ccggtttgggtagacgggtatgaaccggttggtatttcttctggttcggataagcggttc
gtgagtagcgtttgctggaggcaatcaggtgtggaccagtgcacgctagtggctgcggga
tctgatggagtattgcaggtttacgtgggcaaaagaaagccttag

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