Eutrema salsugineum (saltwater cress): EUTSA_v10005519mg
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Entry
EUTSA_v10005519mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04120
Ubiquitin mediated proteolysis
eus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EUTSA_v10005519mg
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
EUTSA_v10005519mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10005519mg
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
EUTSA_v10005519mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
EUTSA_v10005519mg
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
EUTSA_v10005519mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
18012551
NCBI-ProteinID:
XP_006394637
UniProt:
V4KX13
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MNTLHPQKQEEEEEEEEEDEAAAARYEWDISLSTVVSSSSSASDVIGAIEFDPTDNILAT
AGISRKIRFYGLPSLLRANAGISGGGGGVSFVDHTTACEYYICTPAKLSSLRWRPGSGGR
VIGSGDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGAAAVGASGSDDGTMQVW
DPRCPPEETVGVVRPAGHCRSAVCCVEFDPSGGPAVAVGCADRRGYVYDMRKLVDPALTL
QGHSKTVSYVRFLDGGTVVTAGTDGCLKMWSVEDGCVIRTYEGHVNSRNFVGLSVWRNGA
LFGCGSENNRVFVYDKRWGKPVWVDGYEPVGISSGSDKRFVSSVCWRQSGVDQCTLVAAG
SDGVLQVYVGKRKP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcttcatcctcagaagcaggaagaagaagaagaagaagaagaagaagatgaa
gcagcagcagcgagatacgaatgggatatttctctctccaccgtcgtctcttcttcctcc
tccgcctctgacgtcatcggagctattgagttcgacccgaccgataacatcctcgccacc
gccggaatttctagaaagattcgtttttacggtctcccttctctcttacgggccaacgcc
ggaatctccggaggaggaggaggagtctcattcgtcgatcataccaccgcctgcgagtat
tacatctgtacgccggcgaagctcagtagtctccgatggagacccgggtcgggcggtcgg
gtcatcgggtcgggagattacgacggcgtcgtcacggagtacgacctcgagaaaaggacg
cccgttttcgagagggacgagcacggtggccgacgcgtctggagcgtggattacacgcga
cacggtggcgccgccgctgtgggagcgtcgggatcggacgacgggactatgcaggtttgg
gatccgaggtgtccgccggaggaaactgtcggcgttgtccgaccggccggacattgccgg
agcgccgtttgttgcgttgagttcgatccttccggcggacccgcggtggccgttggatgc
gctgatcggagagggtacgtgtacgacatgaggaaactcgttgacccagcgttgactttg
caaggtcactctaaaacggtgtcgtatgtgaggttcctcgacggtggtacggtggtgacg
gcaggcacggacggatgtctgaagatgtggagcgtggaggacgggtgcgtgattcgcacg
tacgaggggcacgtgaacagtcggaacttcgtggggttgtctgtgtggagaaacggcgcg
ctgtttggttgcggatcggagaataacagggtgttcgtgtacgataagaggtgggggaag
ccggtttgggtagacgggtatgaaccggttggtatttcttctggttcggataagcggttc
gtgagtagcgtttgctggaggcaatcaggtgtggaccagtgcacgctagtggctgcggga
tctgatggagtattgcaggtttacgtgggcaaaagaaagccttag
DBGET
integrated database retrieval system