KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10005608mg
Entry
EUTSA_v10005608mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03082  ATP-dependent chromatin remodeling
eus03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    EUTSA_v10005608mg
   03083 Polycomb repressive complex
    EUTSA_v10005608mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:eus03036]
    EUTSA_v10005608mg
Enzymes [BR:eus01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     EUTSA_v10005608mg
Chromosome and associated proteins [BR:eus03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     EUTSA_v10005608mg
   HDAC complexes
    Sin3A-HDAC complex
     EUTSA_v10005608mg
    BRAF-HDAC complex
     EUTSA_v10005608mg
    REST complex
     EUTSA_v10005608mg
    SHIP complex
     EUTSA_v10005608mg
    MiDAC complex
     EUTSA_v10005608mg
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     EUTSA_v10005608mg
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    EUTSA_v10005608mg
  Chromatin remodeling factors
   NuRD complex
    EUTSA_v10005608mg
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 18011794
NCBI-ProteinID: XP_006394313
UniProt: V4KK82
LinkDB
Position
Unknown
AA seq 470 aa
METDESGVSLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIVHYHLHRR
LEISRPNLADAADIGRFHSPEYVDFLASVSPESVGDPSSARNLRRFNVGEDCPVFDGLFD
FCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGVNARFPAYLTTRIILGFKR
VLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLN
DGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLR
SYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVEPSP
MENLNTPKDMEKIRNTLLEQLSGLIHAPSVPFQHTPPVNRVLEEPEDDLEKRPKPRIWSG
TATYESDSDDDEKPLHGFSGIGGATMDRDSTGEDEMEDDNPEPEVDPPSS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggagacagacgaaagcggcgtgtctttgccgtcgggacccgatggtcggaagcggcga
gtcagttacttctacgagccgacgatcggagactactactacggtcaaggacatccgatg
aaacctcaccggatccgtatggctcatagtctaatcgtccattatcacctccaccgtcgc
ctcgaaatcagccgtcctaacctcgccgacgccgccgatattggtcggtttcattcgccg
gagtacgttgattttctcgcttccgtttcaccggaatccgtgggcgatccttcgtcagca
cgaaacctaaggagattcaatgtcggcgaggattgtcctgtcttcgacggacttttcgac
ttttgccgtgcgtccgccggaggttccattggcgctgccgtcaaattaaaccggcaggac
gcggatatcgctatcaattggggcggtgggcttcaccatgccaagaaaagcgaagcctct
ggggtaaatgctcgattccctgcttatctcacaactcgtatcattttagggtttaagcgg
gttctctacatagacatcgatgtccaccatggagatggagtggaagaggcgttttacacc
actgatagagttatgacagtttctttccacaaatttggggactttttcccaggaactggt
cacataagagacgttggggcggaaaaaggaaaatactatgctctaaatgttccattgaac
gatggcatggacgatgaaagtttccgcagcttgttcagacctcttattcagaaggttatg
gaggtgtatcagccagaagcagttgttcttcagtgtggggctgactccttaagcggtgat
cggttgggttgcttcaacttatcagtcaagggtcatgctgattgcctccggttcttaaga
tcttacaacgttcctctcatggtcttgggtggtggagggtatactattcgaaatgttgcc
cgttgctggtgttatgagactgctgttgcggttggagtagagccggacaacaaacttccg
tacaatgagtattttgagtattttggcccagattatacgcttcatgtcgaaccaagccca
atggagaatttgaacacaccaaaagatatggagaagataaggaacacgttgctagaacaa
ctttcggggctaatacacgcgcctagcgtgccatttcagcacacacctccagtcaatcga
gttttggaggagccggaagatgacttggagaaaagaccaaagcctcgcatttggagtgga
acagcgacttatgaatcggacagtgatgatgatgagaaacctcttcatggtttctcaggt
attggtggcgcaactatggacagggactctacaggtgaagatgaaatggaagatgataac
ccagagccggaggtggatcccccatcttcttaa

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