Eutrema salsugineum (saltwater cress): EUTSA_v10005821mg
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Entry
EUTSA_v10005821mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K23720
UV-stimulated scaffold protein A
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EUTSA_v10005821mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10005821mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
EUTSA_v10005821mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
18020317
NCBI-ProteinID:
XP_006402440
UniProt:
V4LVG0
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MDGRDDGGGKVIGLIEKATKSTAQEVDPRLLKAIKFTLRYSDSEVRLGARTLMELMKHKD
SQVRYLTLLIIDELFMRSKLFRALIVENLDQLLSLSVGFRSNLPLPAPQAIATILRTKAI
EFLEKWNLSFGLHYKELRLGFDYLKNTLKLKFPDLQANAARIQRERQEREMRTKEILRNK
FDSLRDTFGLLKYEIDETIKEINECLQIVRWRGDDGVPLAILDEEDYEEIRCSHLRQIRL
DSLKQSDKVEETSENRVVFDVLREKCKLLVKKHLISAKEGISLLIRVEVTDNRTRDSMLK
EFLDIRNNILATEKKCEEAGFTISRMIGTREKEEANEEEEDIWEEDDGNVGTDSVENVAP
LARSQNVEGSSLQASTEANKSTSESKSTSESRSSKASSTKEVGRSGGSLRDKLISEAPVM
NWGSQLSNWDSTTEVRANHRGLELESHWGRVDQDAVIPADKIAELNLQATVYREERSEIS
PCHAPLKKGGLCQRRDLRACPFHGPIVPRDDEGNPIIQESPLDESENQTSSSTGIDQDVP
MDETTSDSDPNQLARRIAKQALKNIREKDREEIRKTAKRKKVAKVKEHNFSVLRDVALAS
TSRSAVIDEEFDRVFAARKNKKQTFSSMRRKKTTAKDRISERLLSNRVKGTKPKQLPQGD
DENYRETAANQW
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacgggagagatgacggcggcgggaaagttattgggttaatagagaaagcgacgaaa
tcgactgcgcaagaggttgacccgaggctgctcaaggcgatcaaatttactcttcggtat
tccgattcggaggtccgactcggtgcgagaaccctaatggagctcatgaaacataaagac
tctcaggttcgatatctgacgcttctcataatcgacgagcttttcatgagatcaaagctc
tttagagctctaatagttgagaatcttgatcagctgctgagtttaagtgttgggtttaga
agcaatctacctcttcctgcaccacaggctattgccaccattttgcgtacaaaggctatt
gagttcctggagaagtggaatctgtcttttgggttacattacaaggagcttaggctgggt
tttgattaccttaagaataccctgaagctcaagttccctgatttgcaggccaacgctgca
cggattcaacgagagagacaggagagggagatgaggacaaaagagattttgcgaaacaag
tttgattccttgagggacacttttggactcttaaaatatgagattgacgaaacaataaag
gaaatcaacgagtgtctgcaaattgttcgatggagaggggatgatggtgttccacttgcg
atcttagatgaggaagattacgaggagatccgttgttctcatctgaggcaaattcgtctt
gattcactgaagcaatcagataaggttgaagaaaccagtgaaaacagagtggtattcgat
gtattgagagaaaagtgcaagcttctagtgaaaaagcatcttatctcggctaaagaaggg
atctctcttctcatcagggttgaggtaactgataacaggacgagagattccatgttgaaa
gagttcttggatattaggaataacatattggcaactgaaaagaaatgtgaagaagctggt
tttacaatttcaagaatgattggcactcgggagaaagaagaagcaaacgaggaagaagaa
gatatttgggaggaagatgatggcaatgttggaactgattcagtcgaaaacgtggctcct
ttggcgagaagtcagaacgttgagggttcgtccttgcaagcttcaactgaagcaaataag
tctacatcagaatctaagtctacatcagaatctaggtccagtaaagcgtcgagcactaaa
gaagttggaagaagtggtggctctcttagggataagctaatttctgaagcgcccgtgatg
aattggggatcacagttgagtaattgggactcaactacggaagttcgagctaatcatcga
ggcctagagctcgagagccactggggcagagtggaccaagatgctgtaattccagcagat
aaaatagcagaactaaatctccaggcaactgtttacagagaagagagaagtgagatttct
ccatgccatgctcctctaaagaaaggtggtctttgccagagaagagatctacgagcatgt
ccgtttcatggacccattgtacctcgggatgatgaaggaaaccctataatccaggaatct
ccattagacgagagtgaaaaccaaacttcttcaagtacaggtatcgaccaggacgtgcct
atggatgaaacaacttcagattctgatcctaatcagttggctaggcgaatagcaaaacaa
gctctaaagaatatccgggagaaagacagagaagagataaggaaaacagcaaagcgaaaa
aaggttgctaaggttaaggaacataatttttcagttctgcgtgatgttgctttagcctca
acttccaggtcagctgttatcgacgaagagtttgatagagtctttgctgcaagaaaaaac
aagaaacaaaccttttcctcaatgcggcgtaagaaaacaacggctaaagatagaatatcc
gagagactgttaagtaaccgggtaaaaggtactaaaccgaagcagttgcctcagggtgat
gatgagaactaccgggaaacagcggcgaaccagtggtaa
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