Eutrema salsugineum (saltwater cress): EUTSA_v10005852mg
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Entry
EUTSA_v10005852mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14485
transport inhibitor response 1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
EUTSA_v10005852mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10005852mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
EUTSA_v10005852mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
18020340
NCBI-ProteinID:
XP_006402320
UniProt:
V4LV51
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MHKRLALSFPEEVLEHVFSFIQQDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPAT
VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYAWLEEIRLKRMVVSDE
CLELIAKSFKNFKVLVLSSCDGFSTDGLAAIASTCRNLKELDLRESDVDDVSGHWLSHFP
DTYTSLVSLNISCLTSEVSFSALERLVSRCPSLKSLKLNRAVPLEKLATLLQRAPQLEEL
GTGGYTAEVRPDVFSGLSLALSGCKKLNCLSGFWDAVPAYLPAVYSLCSRLTTLNLSYAT
VQSYDLVKLLSQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT
EQGLVSVSVGCPKLESVLYFCRQMTNAALVTIARNRPNMTRFRLCIIEPKAPDYLTLEPL
DVGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC
DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE
RGPPDSRPESCPVERVFIYRSVAGPRFDMPGFVWNMDQHSTMRFSRQIITTNGL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcataagcgattggccttgtcgtttccagaagaagtactggagcacgtattctcgttt
atacagcaggacaaggataggaactcggtgtctctggtgtgcaagtcatggtacgagatc
gagcggtggtgcaggaggaaagtgttcatcgggaactgttacgcggtgagcccggcgacg
gtgatcaggaggttcccgaaagtgagatccgtggagctcaagggcaaacctcacttcgcc
gacttcaatttggtgcctgatggatggggaggctacgtgtatccttggattgaggccatg
tcttcgtcgtacgcgtggctggaggagataaggctgaagcggatggtggtgagcgacgag
tgcttggagctcatagctaagtcctttaagaatttcaaggttctcgtgctttcttcctgc
gatggcttctccactgatggcctcgctgctatcgcttccacttgcagaaatctgaaagag
cttgatctgcgtgagagtgatgttgatgatgttagcggacactggcttagtcatttccca
gatacatacacatctttggtatcactcaatatctcttgcttaacctctgaggtcagtttc
tctgcgctggaaaggttggtgagtaggtgtcccagtctcaagtctctcaagcttaaccga
gctgttcctcttgaaaagttggctactttacttcaaagagcacctcaattggaagaattg
ggcaccggtggttacactgctgaagtccgtccagatgtcttctctggtttatcactagct
ctctctggctgcaagaagctcaattgcttatctggcttttgggatgccgttcctgcctat
ctaccagccgtttattcgctttgcagccgcctcacaactctgaacctgagttatgcgact
gtccagagctatgatcttgtcaagcttcttagtcaatgccctaaattgcagcgcctctgg
gtgctggactacattgaggatgctggtcttgaggtgcttgcttcaacctgcaaggacctt
cgcgagttgagagtgtttccgtctgagccttttgtcatggagccaaacgttgcattgaca
gaacaagggcttgtctccgtctccgtaggctgtccaaaacttgagtcggttctctacttc
tgccgtcaaatgaccaatgctgcgttggtgaccattgctaggaaccgtccgaacatgact
cggttccgtttgtgcatcattgagccaaaagcccccgattatctgactctagagccactg
gatgtgggatttggagccatagtagagcactgcaaagatctccggcgcctctccctatcg
gggctgttgacggacaaggttttcgaatacattgggacatatgccaagaagatggaaatg
ctctcggtggcgtttgcaggagacagtgacttaggcatgcatcatgttttgtcggggtgc
gatagcttgaggaaactagagataagggactgcccatttggagacaaggcgcttttggcc
aatgcttcaaagctggagacaatgcgatccctttggatgtcttcttgttccgtgagtttt
ggagcctgcaagttgctaggacagaagatgccaaagctcaatgtggaagtcattgatgaa
cggggtccacctgactcgagacccgagagctgccctgttgagagagtgttcatataccga
tccgtggctggtcctcggtttgacatgcctggcttcgtctggaacatggaccaacactca
accatgaggttttccaggcaaatcatcactactaacggattataa
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