Eutrema salsugineum (saltwater cress): EUTSA_v10006290mg
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Entry
EUTSA_v10006290mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03010
Ribosome
eus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
EUTSA_v10006290mg
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EUTSA_v10006290mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
eus03011
]
EUTSA_v10006290mg
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10006290mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eus04147
]
EUTSA_v10006290mg
Ribosome [BR:
eus03011
]
Ribosomal proteins
Eukaryotes
Small subunit
EUTSA_v10006290mg
Archaea
EUTSA_v10006290mg
Ubiquitin system [BR:
eus04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
EUTSA_v10006290mg
Exosome [BR:
eus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EUTSA_v10006290mg
Exosomal proteins of colorectal cancer cells
EUTSA_v10006290mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Plexin_RBD
TBK1_ULD
Ubiquitin_5
UBL_UBAC1
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
18020074
NCBI-ProteinID:
XP_006402395
UniProt:
V4LVC5
LinkDB
All DBs
Position
Unknown
AA seq
157 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDGSGKVQRLRKE
CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGAEE
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctaacggggaagacaataacccttgaggtcgaatcgtca
gacaccatcgacaatgtgaaagcgaagatccaagacaaggaaggaatcccaccggaccag
cagcgattgatattcgccggaaaacagctggaagacgggcgcacactcgccgactacaac
atacagaaggagtcgacgcttcatctcgtgctccgtcttcgtggtggtgcgaagaagagg
aagaagaagacgtacacgaaaccgaagaaaatcaagcataagcataggaaggtgaagctc
gctgttctccaattctacaaagtcgatggatctggtaaggttcagcgtctcaggaaagaa
tgcccaaacgcaacttgcggtgctggaacgttcatggctagtcacttcgatcgccattac
tgtggcaagtgtggtctcacttacgtctaccaaaaagagggagctgaggaatga
DBGET
integrated database retrieval system