KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10006524mg
Entry
EUTSA_v10006524mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03030  DNA replication
eus03410  Base excision repair
eus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EUTSA_v10006524mg
   03410 Base excision repair
    EUTSA_v10006524mg
   03420 Nucleotide excision repair
    EUTSA_v10006524mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eus03032]
    EUTSA_v10006524mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10006524mg
Enzymes [BR:eus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EUTSA_v10006524mg
DNA replication proteins [BR:eus03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    EUTSA_v10006524mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      EUTSA_v10006524mg
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 18994048
NCBI-ProteinID: XP_006417712
UniProt: V4KEA4
LinkDB
Position
Unknown
AA seq 2170 aa
MSGDSRRWDRKDSRRSTKQKVVNTAEDELESKLGFGLFSEGETRLGWLLNFASSSWEDPD
TGKTYSCVDLYFVTQDGLSFKTKYKFRPYFYAATKGKMELEVEAYLRRRYERQVADIEIV
EKEDLDLKNHLSGLQKKYLKVSFDTVQQLMEVKRDLLHIVERNQAKFDALEAYESVLAGK
REQRPQDCLDSMVDLREYDVPYHVRFAIDNDVRSGQWYNVSISSTDVTLEKRTDLLQRAE
VRVCAFDIETTKLPLKFPDAEYDQIMMISYMVDGQGFLIINREFVGEDVEDLEYTPKPEF
EGYFKVTNVNNEVELLRKWFSHMQELKPGIYVTYNGDFFDWPFIERRASHHEIKMNEELG
FRCDHNQGECRAKFVCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVLF
AMEKPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMVPDEVLRKGSGTLCEMLLMV
EAYKANVVCPNKNQADPEKFYEGHLLESETYIGGHVECLESGVFRSDIPTNFKLDSSAYQ
QLIDNLGRDLEYAITVEGKMKMDSISNYDEVKDDIKEKLEKLRDDPIREEGPLIYHLDVA
AMYPNIILTNRLQPPSIVTNEVCTACDFNLPGKTCLRKLEWVWRGVTFMAKKSDYYHLKK
QIESEFVDTGANIQSSKSFLDLPKVEQQTKLKERLKKYCQKAYRRVLDKPITEVREAGIC
MRENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNSIKIQEAQDMVVVYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCA
LPGSFPENFTFKTIDMKKFTISYPCVMLNVDVAKNNTNDQYQTLVDPVRKTYESHSECSI
EFEVDGPYKAMIIPASKEEGILIKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAEL
FDKFLLGSTLEECYSAVAAVANRWLDLLDNQGKDIADSELLEYISESSTMSKSLADYGEQ
KSCAVTTAKRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFALSKTDPERM
KFYLRKWCKASSDVGIRLIIDWSYYKQRLSSAIQKVITIPAAMQKVANPVPRVLHPDWLH
KKVREKEDKFRQRKLVDMFSSANKDGVLDTNHSVAHDNVEDIEDFCKENRPAVKGPKPFA
RSYEVNKEKSECEQQESWGPKRDDISFQNIDRKVDYQGWLELKKRKWKETLEMRKKRRLG
DLRSSNQIDAHETNKKVPHGRGGVGSYFRRPEEALTSSHWQIIQLVPGPQSGRFFAWVVV
EGLMLKIPLTIPRVFYINSKAPIAGKFPGKCVNKILPHGRPCYNLIEVEIQEEQFRKESK
KVAALLADPEIEGIYETKVPLEFSAICQIGCVCKIDKTAKHRNSQDGWKVGELDMKTTTE
CHYLERSIPLVYLYNSTSTGRAIYVLYCQASKLMSAVVVNLYGDKELLPSSLERQFRDSC
QELSLESLSLDDILFQVDYVDHPEAAKKILQKAISEYREENCGPAVVVIECLHFNSMKED
IKALDDFPCVRIPFNGDDNSYQPVSWQRPAAKIAMFRCAAAFQWLDRRIAQSRYAHVPLG
NFGLDWLTFTVDIFLSRALRDQQQVLWVSDNGVPDLGGINNEETFFADEVQQTSLVYPGA
YRKVSVELKIHNLAVNALLKSNLVSEMEGGDFLGFEQDLNFGGSSSNVNASFDETTGCAQ
AFRVLKQLIQSCLADVRKSDNVYADSILQRLSWWLCSPCSKLHDPALHLMLHKVMQKVFA
LLLTDLRRLGAIIIYADFSKVVIDTGKFDLSAAKAYCESLLTAVGNSDIFEWILLEPVHH
WHSLLFMDQYNYAGIRATDDEISPDEVTIEPKWSVARLLPEYIQRDFIIIVAKFIFDPWK
FALENKRGSSDSLEAQMVEYLREQIRSNFINMLVKKIGDIMSHMKEINVSDASRVSGQAP
KGDNTLEFIQIITAVLALDQNVQQDVLVMRKNLLKYINVKECAAEAEFLDPGPSFILPNV
ACSNCDAYRDLDICRDPALLTEKEWSCVDSQCGKIYDREQMESSLLQMVRQRERMYHMQD
LVCMRCNQVKAAHLTEQCECAGSFRCKESESEFLKRMEIFLDIAKRQKFLLLEECTSWIL
EPFSYLQNNT
NT seq 6513 nt   +upstreamnt  +downstreamnt
atgagcggagatagtcggagatgggatcgaaaggactcccggaggtcgactaagcagaaa
gtagtgaacactgcagaagatgagctcgaatctaaactcggatttgggcttttctccgaa
ggggagacccgcctcgggtggctactcaatttcgcatcatcatcatgggaagatcccgat
actgggaaaacctatagttgtgtggacctttactttgttactcaggacgggctttctttc
aagacaaagtacaagttccgcccatacttctatgcagccacgaaaggcaaaatggaattg
gaagttgaagcctacttgagacgccgatatgaaagacaagttgctgatattgagattgta
gaaaaagaggaccttgatcttaaaaatcatctatctggcctgcaaaaaaaatacctaaaa
gtatcatttgatactgtgcaacaattgatggaagtcaagagggatctgttgcatattgtc
gaacgaaaccaggcaaaatttgatgcacttgaggcatacgaatccgtattggctggaaaa
cgagaacaacgtcctcaagattgcttagactctatggtggacctccgggagtacgatgtt
ccttatcatgttcgatttgcaattgataatgatgtgcggagtgggcaatggtacaatgtc
agtatttccagcaccgatgtcacactagagaagaggacagatcttctccaacgcgcagaa
gtccgtgtttgtgccttcgatatagagacaacaaagcttccgttgaagtttccggatgct
gaatatgatcagattatgatgatatcctacatggtcgatgggcaaggttttctaattatt
aacagagagtttgttggcgaagacgtagaagatctggagtatacacccaaaccagagttt
gaagggtatttcaaagtcactaacgttaacaacgaggttgaactccttcgaaaatggttt
tcccatatgcaagagttgaaacccggtatttatgtcacatacaacggtgactttttcgac
tggccatttatagaacggagagcatcccatcatgagatcaaaatgaatgaggagttggga
ttccgttgtgatcataatcaaggtgaatgtcgagctaaattcgtatgccatttggattgt
tttgcttgggtgaaacgtgatagctatcttcctcagggaagccatggtctgaaggccgtt
acaaaggctaaactgggttatgatccactggaagtgaacccagaggacatggttctattt
gcaatggaaaagccacagacaatggcctcctattctgtctccgatgctgttgcaacttat
tacctatacatgacttatgttcatccgttcatattttctctcgcaaccattatcccaatg
gttcctgatgaggtcttacgcaaaggaagtggcaccctgtgtgaaatgcttctgatggtt
gaggcttacaaggctaatgtagtatgtcccaacaaaaatcaagctgaccctgagaagttc
tatgaaggtcatcttcttgaaagtgagacatatattggtggccatgtagagtgcctcgaa
agtggtgttttcagatctgacattccaaccaattttaagctcgactcatctgcataccag
caactgatcgataaccttggccgggatctggaatatgcgatcactgtagaaggaaaaatg
aaaatggattcaatttctaattatgatgaagtgaaggacgatatcaaggaaaagctcgag
aagttacgagatgaccctatacgtgaagaggggcctcttatttatcaccttgatgttgca
gcgatgtatcctaatatcatcttaactaatagacttcagccaccatcaatagttacgaat
gaggtttgcacagcatgtgatttcaacctcccgggaaaaacgtgtcttagaaaacttgaa
tgggtttggcgtggggtgacattcatggcaaagaaaagtgattattaccatctgaagaag
cagatcgagtctgaatttgttgatactggtgcaaatattcagtcttcaaaatcttttctt
gatctgccaaaggtggaacaacaaactaaactaaaagaacgattgaaaaaatattgtcaa
aaggcatatagacgtgtacttgacaagccaatcactgaagttcgtgaggctgggatatgc
atgagagaaaacccgttctatgtagacactgttcggagctttcgagataggaggtacgaa
tacaaaacacttaacaaggtctggaagggaaagttgtcagaggccaaggcaagtggcaat
tcaatcaagatccaggaagcacaggacatggtagtggtatacgattccttgcagctagct
cataagtgtatacttaactccttctatggatatgtcatgcgaaagggtgcaagatggtat
tccatggaaatggctggtgtagttacctatactggagctaaaatcatccagaatgcccgt
ttgcttattgagcgaattgggaaaccacttgagctggatacagatggtatatggtgtgct
ctccctggatcttttccggagaactttacttttaaaacgatagacatgaagaaattcact
atctcttatccgtgtgtaatgcttaatgttgacgtggctaaaaataatacaaatgatcaa
tatcagactcttgtggatcctgtacgcaagacatatgagtcgcatagtgaatgctcaatt
gaatttgaagtggatggaccatacaaggcaatgattatccctgcatcgaaagaagaagga
atcttaattaagaagcggtatgctgttttcaatcacgacggaaccttagcagaactcaag
gggtttgagatcaagcgtagaggggagctgaaactcattaaagttttccaggctgagctt
tttgataaatttctccttggatcaactcttgaagagtgttattctgctgttgcagccgtt
gcaaatcgatggcttgacctactcgataatcaaggaaaagatattgccgatagtgaactg
ctagagtacatatcagaatcaagcaccatgagcaaatcgttagcagattatggtgagcag
aagtcatgtgcagtgaccacagcaaaacgcctggctgattttcttggtgatacaatggtc
aaagataaaggactacgttgccaatacattgttgcttgtgaaccaaaggggacacctgta
agtgaacgtgctgttcctgttgccatatttgccttatctaaaacggatcctgagagaatg
aagttttatctgcgaaaatggtgtaaggcatcgtcagacgttggaattcgtttaattatt
gattggtcttattacaagcagcgccttagttcagctatccagaaagttattaccattcct
gctgcaatgcaaaaggtggcaaatcctgtgcctagggtgcttcatcctgattggctccat
aaaaaagtccgtgagaaagaggacaaatttcgccagaggaaactagttgatatgttcagc
tcagcaaacaaagatggtgtgttggacacaaatcattcggtggctcatgataatgtggaa
gatattgaggatttttgcaaagaaaaccggcctgccgtaaaggggccaaagccatttgct
cgttcttatgaagtcaataaagaaaagtctgaatgtgagcagcaagagagctggggtcca
aagcgcgatgatatctcatttcagaacattgataggaaagtagattaccaaggatggctt
gaactgaaaaagagaaaatggaaagaaactctagaaatgaggaaaaaacgaaggttgggt
gatctaagatcttcaaaccagattgatgctcatgagacaaataaaaaagtcccacatgga
agaggaggtgtaggttcatactttaggaggcctgaagaagctttgactagttcacattgg
cagataatacagctggtcccaggtccacagagtgggcgatttttcgcttgggtggttgtg
gaaggattgatgcttaagatcccgttaacaatcccaagggtgttttacattaattccaaa
gctcctatagctggaaaattcccgggaaagtgtgtcaacaagattcttcctcatggaagg
ccttgttataatttgattgaggttgagattcaagaagaacaatttagaaaagaaagcaaa
aaggttgcagctcttcttgcagaccctgaaattgagggcatatatgaaactaaggtgcct
ctggagtttagtgctatatgtcagataggatgtgtatgcaaaattgataagacagccaag
caccgtaatagccaagatggatggaaagttggtgaacttgatatgaaaacgacaactgaa
tgccactacctggagcgttcaattccacttgtttacttgtataacagcacttccacagga
cgtgctatatatgttttatattgtcaagcatcgaagcttatgtctgccgtggttgttaat
ctttatggcgacaaggaattattaccatcttccctagagagacagtttagagatagttgc
caagaattgtcactcgagtcattatctttggatgatattctctttcaggtggactatgtt
gaccatcctgaagctgccaagaagatcttacaaaaagccataagcgaatacagagaggaa
aattgtggaccagctgttgtagtcatcgaatgccttcattttaactccatgaaggaagat
ataaaggccctagatgatttcccgtgtgtgaggattcccttcaatggtgatgacaatagt
tatcagcctgtctcctggcaacgtccagcagcaaaaatagcgatgttccgttgcgctgca
gcatttcagtggttggatcggaggattgcccaatcaagatacgcccatgtgccgttgggg
aactttggacttgattggttaacattcacagtagatatcttcctgtccagggcactccgt
gaccagcagcaggtcctttgggtgtcagataacggtgttccagaccttggaggtataaac
aatgaagagacattctttgctgatgaggtgcaacagacaagtttggtataccctggagcg
tatagaaaagtgtccgtggagttaaagattcacaatttggctgtaaatgcccttttgaaa
agcaacttggtgagtgagatggaaggaggcgactttttgggattcgaacaggatttgaac
tttggaggaagtagttcaaacgttaatgccagttttgatgagaccactggatgtgctcaa
gcatttcgtgtcctcaaacaattgattcagagttgcttggctgatgtgcgtaaatctgac
aatgtatatgctgattccattttgcaacgcttgtcttggtggctctgcagcccttgctca
aagcttcatgatccagctcttcatctcatgcttcacaaggtcatgcaaaaggtgtttgcg
ctgcttttgactgatttgcggagattaggtgctataataatatatgcagacttctcaaag
gtagttatcgacacagggaaattcgatctatctgctgctaaggcttattgcgaaagcttg
ctcacagcggtggggaatagcgatatctttgagtggatcctgctcgagccggttcaccac
tggcactcattacttttcatggaccagtataactacgctggtatccgagctaccgatgat
gaaatttcacctgacgaagtgactattgaaccaaagtggagcgtcgcacggcttttaccc
gagtatattcagagggatttcatcatcatcgttgccaagtttatttttgacccatggaaa
tttgcattagagaataaaaggggcagttcagatagtttggaggcacagatggtagaatat
ttaagggaacagatacgctcaaacttcataaatatgcttgttaaaaaaatcggtgatatc
atgtcacacatgaaggaaataaacgtttcagatgcatctcgggtttctggtcaagctccg
aaaggagataacacgttagaatttatacaaattatcactgctgttctggctcttgaccaa
aacgtccagcaagatgttttggtaatgagaaagaatctgttgaagtacattaacgtaaaa
gaatgtgctgctgaagccgagtttcttgatcctgggccctccttcatcttacctaatgtg
gcttgcagcaactgtgacgcctacagagacctagatatatgcagagacccagctctgtta
acagagaaagaatggtcctgtgtagattcacaatgtgggaagatatatgacagagagcag
atggagagtagtcttctccagatggtgagacagagagaaagaatgtaccacatgcaggat
ctagtttgcatgaggtgcaatcaggtgaaggcggcgcatttgacagagcagtgcgagtgt
gctggatcctttagatgcaaggagagcgagtcagagttcctcaagaggatggagattttc
ttggatattgcaaagcggcagaagtttctattgttagaagaatgcacctcttggatttta
gaacccttcagctacttacaaaacaatacataa

DBGET integrated database retrieval system