Eutrema salsugineum (saltwater cress): EUTSA_v10006548mg
Help
Entry
EUTSA_v10006548mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10006548mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
EUTSA_v10006548mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
18992629
NCBI-ProteinID:
XP_006416109
UniProt:
V4KWP5
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MDQSQRTVAAPSSSRSYQFHPARAAIIDLFNLYLGRGNRQKPDESIRDPPNKSQKRVHAP
NRDLPPRNEQFILDFEQLQSQFGDPDQLRTITESVLISMVLQCSNHAPRAEFLLFALRTL
CRISYINWDTFLPSLLSSVSAAEASLSQVAQAATAGSSATSSQSLAPVASNTIPSTLLPS
AHGIGSSSPSGNEPGNVQQVARAGQRVRAAAINSLRQLSCKIILIGIEFNLKPVTHAEIF
QYMMNWLVNWDRRDLGTEDSAGKSWRSAKTLAEWLRSCLDVIWLLVEEGKSRIPFYELLR
SGLQFIENIPDDEALFTLIMEIHRRRDAMAMHMLMLDQHLHCPTFGTHRISSQSTANVSV
EAVAHLRYSPITYPSVLGEPLCGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRV
LVVAPCYRPSAQAGPIPGAVFTSDMICEAIIDRIVELLNLTNSGNIKFENANCWQEWLVF
SDIFFFLIKSGCTDFVDFIDKLVLRLNGVDKHILRTNHVTWLLAQIIRVELVMTALNADA
KKVETTRKILSFHREDRTDPNNPQSVLLDFVSSCQNLRIWSLSATTRAFLNNEQLLKGKQ
IDEWWKSKGERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEMPGLQPND
RVMMMQEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQVVPSIAMVETYTRLLLISPHS
MFRSHFSQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKG
KRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTETLNRVTIMTLAITIKTRGIA
DADHLVYLQTMLEQILATSQHTWSERTLRHFPTLLRETLIRRVDKRSLSIQAWQQAETTV
INQCTQLLSPSAEPAYVMTYLSHSFPQHRQYLCAGACLLMQGHPDNINSANLARVLREVS
PEEVTANIYTLVDVLLHHVRKDLQQGHNLKEVLAKQDANLAFFFWTHEMLPLDIFLLALI
DRDDDPHALIIAKSLLVNEALLQRIKGYCSNRGPPEHWLNTQLFNRNELQKALGNHLSWK
DRYPTFFDDIAARLLPVIPLVVYRLIENSAFELADIILSAYAKFLAYHPLRFTFVRDILA
YFYGHLPGNLVVGVLKVLDLSKIPLSESFPQYITSSSAPTCPPLDYFATLLLNLVNNVIP
PLSSNCSSRSGSMADFLNSSVRPPHGKTPGASQPGPANASEGHKAFYQIQDPGTYTQLVL
ETAVIEILSLPVSASDIVSSLVKIIVNIQSTLIQSGNNGFHGAANGVGQGSVLPTSPSGG
STDSMSASRSTCGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHTQLYIEASRV
AIDTWWLNDGKRSEGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLE
GTHIIIRNLRPVTSVAMLRVAFRIMGPLLPRLANTRTLFNKTLALLLSTMVDVFGKNSQT
PVPVEASQIADLIDFLHHIVHYEGQGGAVQSSSKPRPDILALIGRAADSLRPDVQHLFSH
LKTDPNSSIYAAAHQNTAKTSTS
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcgcagcgcacagtcgctgctccttcatcttctcgatcgtatcagttccat
cctgcgcgtgccgcaattatcgatcttttcaatctctacttagggagagggaaccgccaa
aagcccgatgaatccatccgagatcccccgaacaaatcccagaagcgtgttcacgctcct
aacagagacttaccccctagaaacgagcaattcattttggatttcgagcagcttcagagc
caattcggtgacccagatcagttgagaacaatcacggaatcagttttgatatctatggtg
ttgcagtgtagcaatcatgcacctcgtgctgagtttctcctctttgccttgcgtacatta
tgtagaattagttacattaattgggatacctttttaccatccctcctctcgtcggtttct
gctgctgaggcgtctctaagccaagttgctcaagcagcaacggctggttcttcagcaact
tcttcacagtctttagctcccgtagcttccaatactatccctagcacactgttgccttca
gctcatggtattggttcctcatcaccttcaggaaatgaaccaggtaatgtgcaacaggtt
gctagggcgggccaacgcgttagagctgcagcgataaacagtctgcgccagctcagttgc
aagattatcctgattggcattgaatttaacctcaaacccgtcactcatgccgagatcttc
cagtacatgatgaattggcttgtgaactgggacaggagagatctgggaactgaggactct
gcgggaaagtcgtggaggtctgcgaagactttagctgaatggttacggagctgtttggat
gtgatctggctgttggtagaagagggtaaatctcggataccgttttatgagttattgcgc
agtggtctacagtttatagagaacatacctgatgatgaagccttgttcactcttatcatg
gagatacaccggaggagagatgcaatggccatgcacatgctcatgttggaccaacacctt
cactgtccaacgtttggtacacatcgtatttcgtcccagtcaactgccaatgtttcagtt
gaagctgtggcacaccttcgctattcaccaattacatatcccagtgtgcttggggaacct
ttatgtggagaggatctggcaatgtctattccaaaaggaagcctggattgggagagagca
gtgcgttgcattagacatgctattcgcactacaccgtcgccggactggtggaagcgtgtt
cttgttgtggccccctgttatagaccttctgcacaagcggggcctatccctggtgccgtt
ttcacttctgacatgatttgtgaggcaatcattgacaggattgttgagcttcttaatctg
accaactcaggcaatattaagtttgaaaatgcgaattgctggcaagagtggctggttttc
tcagatatattcttctttctaatcaaaagtgggtgtactgactttgttgatttcattgat
aagttggttttacgccttaacggtgttgataagcatattcttcgaacgaatcatgtgacg
tggttacttgcccaaataatacgcgtggagcttgtgatgactgctttgaatgctgatgct
aaaaaggtggagactactaggaagatcttatcatttcacagggaagatagaactgatccc
aataatcctcaaagtgttttgcttgacttcgtaagcagttgtcagaatctacggatttgg
tcactaagcgcaacaactagggcattcctaaacaatgaacaactgttgaagggaaaacag
attgatgagtggtggaaaagcaaaggagagcgcatgatggattatatgaatatggatgat
aggtcgattggcatgttttgggttgtttcctatacaatggcacaaccggcgtgtgaaaca
gttataaactggttatcttcagctggcatggctgagatgcctggattacaaccaaacgac
agagtaatgatgatgcaggaagtgaccccattaccgatgtcattgttatctggcttttca
atgaacttgtgcttgaaattggcccttcaaatggaagaagctttgtttgttagccaggtt
gttcctagcattgcaatggttgaaacatacacaagattgctgctcatttccccgcactcg
atgttccgttcgcatttcagtcaattggcccagagaaatgcttctctgctaagcaagcct
ggggtgactttgcttgttcttgagattctgaactaccgtttgcttccgctatacagatac
caaggaaaaagcaaaaccttgatgtatgatgttactaaaataatctctgcattgaaagga
aaacgtggcgaccaccgtatattcagactagccgaaaatttatgcatgaatctcatttta
tcactcagagacttcttttctgtgaaacgggaggggaaagggccaactgaattcactgaa
acattaaaccgcgtaaccatcatgactcttgctatcacaatcaaaacacgtggtatagca
gatgctgatcacctggtttatctgcaaaccatgttggaacaaatactcgctacgagtcag
catacgtggtcagagaggacgctgcgccatttcccaactcttctccgtgaaactttgatt
agacgggtagacaagaggagcctatcaattcaagcttggcaacaggctgaaacaactgta
ataaatcagtgcactcagcttctctcaccatctgctgaacccgcttacgttatgacatac
ctcagtcacagttttcctcaacaccgtcagtatctatgtgctggtgcttgtcttctgatg
caaggccaccctgataacatcaacagcgcaaatctggcaagggtgctgagagaagtttct
cctgaagaagtcactgcgaacatatacactttggtagatgttttgcttcaccacgttcgt
aaagaccttcagcaaggacacaatttaaaggaagttctagccaagcaagacgcaaatctt
gcatttttcttctggacacacgaaatgcttcctctagacatttttcttctggcgctcatt
gaccgcgatgatgatccgcacgccttgataattgcgaaaagccttcttgtaaacgaagcc
cttctgcagaggatcaaagggtactgctcaaatcgtggccctcctgagcactggcttaat
acgcagttgttcaatcgcaatgaactccagaaggcccttggtaaccatctttcttggaag
gacaggtatccaacgttctttgatgatatcgcggcgcgtttgcttccagttatccctctg
gtggtgtacaggctcatcgagaacagtgcgtttgagctagctgatattattttgtctgca
tacgcgaaatttctagcttatcatcctctcagattcacgtttgtccgtgatatacttgcc
tatttctatggtcatcttcccgggaatcttgttgtgggcgttctcaaagtacttgatctc
agcaagattccattgtctgaatcattcccgcagtacatcacctcttccagtgcccctaca
tgcccacctctcgattacttcgccactcttctgcttaatctcgtaaacaatgttatacct
ccacttagcagcaactgcagctcgaggtctggctcaatggcagacttcttaaacagctca
gtgagacctcctcatggaaaaactccaggagcatctcagcccggaccagcaaacgcctct
gagggacataaagcattctatcagatccaggacccgggaacttacactcagttggttctt
gaaacggcagtgatcgagatcctctcgcttcccgtctcagcttcagatattgtctcttcg
cttgtcaagataattgtcaacatacaatccacacttattcaatctggcaacaacgggttc
cacggcgctgcaaacggggtggggcaagggtcggtgctccctacgtctccctcaggaggg
agcacggattccatgagcgcaagccggtccacttgtggtattaacacggcgagctttgtc
tctagaagcggttacacatgccagcaactgtcgtgtctgttgattcaagcttgcgggctt
ttgctggctcagctccctccagattttcacacgcagctttacatagaggcgtcacgtgtt
gcaattgacacatggtggcttaatgacgggaagagatcagaaggtgaactagactcggct
gttggatatgctttgatggatcctacatgggctgctcaggacaacacctcaaccgccata
ggaaatatagtcgccttgcttcatgctttcttcagcaatctcccacaagaatggcttgaa
ggcacgcatatcatcatcaggaacctccggcctgtgacatctgttgcaatgctcagagtg
gcattccgtattatggggccactgctcccaaggcttgcaaacacacgtacgctctttaac
aagacgttagcccttctcttgagcacaatggtcgatgttttcggaaagaactcgcagaca
ccggtccctgttgaagcatcccagattgcagatcttatcgatttcctacaccatattgtt
cactacgagggacaaggaggagctgttcaaagtagcagcaagccgagaccagacatactg
gcgttaatcggaagagcagcggactctctccgaccagatgtacaacaccttttctctcac
ctcaaaaccgatcccaattcttcgatatatgcagctgctcatcagaatacagcaaagacc
agcacctcttga
DBGET
integrated database retrieval system