Eutrema salsugineum (saltwater cress): EUTSA_v10006555mg
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Entry
EUTSA_v10006555mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10779
transcriptional regulator ATRX
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eus03000
]
EUTSA_v10006555mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10006555mg
Transcription factors [BR:
eus03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
EUTSA_v10006555mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
EUTSA_v10006555mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
zf-4CXXC_R1
Motif
Other DBs
NCBI-GeneID:
18994013
NCBI-ProteinID:
XP_006417668
UniProt:
V4MV66
LinkDB
All DBs
Position
Unknown
AA seq
1486 aa
AA seq
DB search
MEAREERSKQKDEKLEENKDTMARKEEEISVNEERMEVEQEEIEAELENVVARVGRGEQK
DESMEEHNNQDEQKDEEMHDTDSRSESSVSFSDEDEQLPAAHDDELDLEKPLSEEEIEEL
ISDLLGVESKAAEAQEALEKESLSRVESEVREELAQTLDGDELDKAVAAEMMTFKDEWEA
TLDELETESANLLEQLDGAGIELPKLYEMIESQAPSGCYTEAWKRRAHWVGTPVTKETVE
SLANAENFLHTHRPVRKRHGKLLEEGASGFLEKKLADDAVKKCLGGTSELDWSSLNKVFS
EKRDEAISFGSKHWASVYLASTPQQAAAMGLEFPGVNEVEELEEIDASLADPFIVDAIEN
ERELALTEEQKKNYIRVKEEDDINIDRELQLRLKRKRRKKRSKQVISHAAERRDNDSAYL
EGNSIASNPDEGQVKSPETSTQLQNNDVNKEENGNLSNSDVDKMVPIIDLHVDTMTDDSQ
NPANNLRCTACNNVVVEVHSHPLLEVIVCVDCKRLIEDRIFKVGDSLERHCEWCGHFADL
INCRSCERLFCASCIKRNIGEEYLSEAQSSGWDCCCCAPIPLQRLTLELEKAMGDKKSIE
SSSDSSSDSSSDSSSENNSVDTDTDVNVAISSKKKSKKKIRRIIDDAELGKDTRRKIAIE
KERQERLRSLQFSARYKTISSLGDVKTIPEGAETEVLGDAHSGYIVNVAREIGEEAVRVP
RSISGKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM
RCVDLGLKTALIVTPVNVLHNWRSEFTKWRPSEVKPLRIFMLEDVSRERRLDLLTKWRNK
GGVFLMGYAAFRNLSLGRGVKDINAAREICNALRDGPDILVCDEAHIIKNTRADTTQALK
QVKSQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAED
VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRKLYKRFLRLYGF
SDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRREDSKYGRRGSIVDIPYDCSSDENIDC
NMVVGEKQRTMNDLQDKVDGYLQKDWWVDLLHQNNYKVSDYSGKMILLLDILSMCADVAD
KALVFSQSIPTLDLIELYLSRVPRHGKRGKFWKKGKDWYRIDGKTESSERQKLVDRFNEP
ENKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRL
MARGTIEEKIYKRQVNKEGLAARVVDRQQVHRTISKEEMLHLFEFDDDDEKSDAVPEITK
ENKATGSQNTGFLMENSQKQKGTLTRVSDKLMENLLQRHSPNWISSFHEHETLLQENEEE
RLTKEEKDMAWEVYRRALEWEEVQRVPFSEAPVLQKPSPSAQTQPQRQPKGFNRSRFVNR
NCTRIAHQLTLISQGRRVGSSTVCGECGRFISWEDVTPASKLSEVN
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaagagaggaaagatcgaagcagaaagatgaaaagctagaagaaaacaaggat
acaatggcgcggaaagaagaagagataagtgtaaatgaagaaagaatggaggtagaacaa
gaggaaatagaggcggagcttgaaaatgtggtagcaagagttggaagaggggagcaaaag
gacgaatcgatggaagaacacaacaatcaagatgagcaaaaagatgaggagatgcacgat
actgatagtagatctgaaagttctgtttctttttcggatgaagatgaacaattgccggcc
gcacatgatgatgagttggatcttgagaaacctctgagtgaggaagaaatagaagagtta
atttcagatcttttgggagtggagagtaaggctgcagaagctcaagaagcacttgaaaag
gaatctctttctagagtagagagtgaagtgagggaggaattagcacaaacactcgatggt
gatgagctggataaagccgtggcagcagaaatgatgacttttaaagacgaatgggaggca
actcttgatgagcttgaaaccgaaagtgcaaacttgttggaacaacttgatggtgctgga
atcgaacttccaaaattgtacgaaatgattgaaagtcaagcccctagtggttgctacact
gaagcttggaaacgaagagctcactgggtcgggactccagtaacaaaagaaactgtggaa
tcattggctaatgcagagaattttcttcacactcaccggccagtccgaaaacgacatgga
aagcttttggaggaaggagctagtgggtttctggagaagaagcttgctgatgatgctgtt
aaaaagtgtctaggtggaacatctgagcttgactggtcgtctctcaacaaagttttttcg
gaaaaaagggacgaggctatttccttcggtagtaagcattgggcttctgtttacttggca
agcactccacaacaagctgcagccatgggattagaatttccaggagtcaatgaggtggag
gaacttgaggagattgatgcaagcctggcagacccttttattgttgatgcaatagaaaac
gaaagagaacttgcccttactgaagaacaaaagaaaaattatataagggtcaaagaagag
gatgatattaatattgatcgtgaacttcaacttcgtttgaaacggaagagacgcaagaaa
agatctaaacaggttatcagtcacgcggcagagcgtagagataacgattctgcatacttg
gaagggaactctattgcctcaaatcctgatgaaggtcaagtaaaaagtccggagactagc
actcaattgcaaaataacgatgtcaacaaagaggaaaacgggaatttatctaattcagat
gtagataagatggtaccgatcatagatttacatgtagataccatgacagatgattcacag
aatccagcaaacaatctgaggtgtactgcctgtaataacgtagttgtggaagtgcatagt
catccccttttagaagtaatagtttgcgtcgattgcaaacgtttaattgaagatagaatt
tttaaggttggtgactctttggaacgtcactgtgaatggtgtggtcactttgctgactta
ataaattgtagatcatgcgaaagacttttctgtgcatcatgtataaagaggaatattggc
gaagaatacttgtctgaagctcaatcctctggttgggattgttgttgttgcgctccaatt
cctttgcaacgattgacactggaactggagaaagctatgggtgataagaagtcaatagag
tccagctctgattccagctcagattctagctctgattccagctctgaaaacaattccgtt
gatacagatactgatgtcaatgtagcaataagctcaaagaaaaaatcgaaaaagaaaatt
cggcggataatcgatgatgctgaactagggaaagatacgagaaggaaaattgcaattgag
aaggaacgacaggagcgccttaggtcgttgcagttttcggccagatacaaaacaattagc
tcgttgggagacgtgaaaactattccagaaggtgcggaaactgaggttcttggtgatgct
cacagtggttacatagtgaatgtggctagggagattggtgaagaagctgtgagagttcct
cgtagcatatctggcaaactaaaagtccatcaggttacagggattagatttatgtgggaa
aatattattcagtctatcagcagagtgaagtctggtgataaaggtcttgggtgcattcta
gcacatacaatgggcctgggtaaaacttttcaggttatagcattcctgtacaccgcaatg
agatgtgttgatttggggttgaaaactgctcttatcgtgacccctgttaatgtgttacac
aattggcgaagtgagtttacgaagtggaggccttcagaagtgaaaccacttcgcattttc
atgcttgaagacgtttcaagggagaggaggttggacttgctaacgaagtggcgaaataag
ggtggagtcttcttgatgggatatgccgcttttagaaacctctctcttgggaggggtgtg
aaggatataaatgcggccagagaaatctgtaatgccttgagggatggacctgatatactt
gtttgcgacgaggcgcacattatcaagaataccagggctgacacaacgcaagcattgaag
caagttaaaagccagagaagaattgccttaactgggtcaccccttcaaaacaatctcatg
gaatattattgtatggttgattttgtaagagaaggattcttgggaagcagccctgagttc
agaaatcgcttccaaaatccaatagaaaacggacagcatatgaattcaactgccgaggac
gtgaaaattatgaaccagagatcacacatcctgtatgagcaattgaaaggatttgtccaa
agaatggatatgaatgttgtgaaaaaggatctgccacccaaaactgtcttcgtaatatct
gtcaagctatcgcccttgcaacggaaattgtataagagatttcttaggctgtatgggttc
agcgatggaagaacagatgaaaggatgaggaaaaacttttttgctgcttaccaggtcttg
gctcagattctgaatcatccagggattccgcaattaagaagggaagatagcaaatacggt
cgccgtggtagcattgttgatattccatatgactgttcaagtgatgaaaatattgactgc
aacatggttgtgggagagaaacagagaactatgaatgatttgcaagataaagttgatggc
tacctccagaaggattggtgggtcgacctacttcaccaaaataattataaggtgtcggac
tatagtggcaaaatgattttgctgttggatattttatccatgtgtgctgatgtggctgat
aaggcgctcgtgtttagccagagtattccgacattggatctcattgaactttatctttca
agagtacctcggcatggcaaacgaggaaagttctggaagaagggaaaagactggtataga
attgatggaaaaaccgaaagctcagaacgccagaagttggttgataggttcaatgagcct
gaaaacaaaagggtgaaatgcactctaatctcaaccagagcgggatcccttggaattaat
ctttatgctgctaaccgtgtgatcattgttgatggttcatggaatccaacctatgatctt
caagctatatttcgagcttggaggtatggccaaaaaaagccagtatttgcgtacaggttg
atggcacgtgggactatcgaagaaaaaatatataaacggcaggtgaacaaggaggggcta
gctgcgagagtggtggatagacaacaagtgcacaggactatctccaaagaagagatgtta
catctgtttgaatttgacgatgatgatgagaaatctgacgccgtacctgagataaccaag
gaaaacaaagcaacaggtagtcaaaacacaggatttttaatggagaattcacagaaacag
aagggcactttaactcgtgtctctgacaaactgatggagaacttactgcagagacacagc
cccaactggatttccagttttcatgagcacgagacattgctacaagagaatgaagaagaa
agactgacgaaggaagaaaaagatatggcctgggaagtttacaggagagcgcttgagtgg
gaagaagttcagcgggttccattcagcgaagctccagtgctccaaaaaccttcgccttcc
gcacaaacacaaccccaacgccagccaaaggggttcaacagaagtcgttttgttaaccgc
aactgcactagaatcgcgcatcagcttacactcataagccaaggaagaagagtcggtagc
agcactgtctgtggggagtgcgggcgcttcatatcgtgggaagacgttactcccgcatcc
aaactttcagaggtaaactaa
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