KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10006562mg
Entry
EUTSA_v10006562mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14312  nuclear pore complex protein Nup155
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    EUTSA_v10006562mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10006562mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     EUTSA_v10006562mg
SSDB
Motif
Pfam: Nucleoporin_N Nucleoporin_C
Other DBs
NCBI-GeneID: 18993380
NCBI-ProteinID: XP_006416964
UniProt: V4KZ49
LinkDB
Position
Unknown
AA seq 1456 aa
MSQDEEIVMRDVTNAGLCVGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV
GETWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGE
EQAICAVGLAKCRPGVFVEAIQYLLVLATPVELVLVGVCCTEGPDGRDPYAEISVQPLPD
YTISSDGVTMTCVTCTNRGRIFMAGRDGHIYELLYTTGSGWHKRCRKVCLTAGVGSMISR
WVVPNVFKFGAVDPVVEMVVDNERQILYARTEEMKLQAYVFGPNGEGPLKKVAEERNLLN
QKDVSQGNRQSTAAGRSNKPTIVSISPLSMLESKWLHLVAALSDGRRMYLSTSSSGSSFS
GFNNHRQTPSCLKVVSTRPSPPLGAGVGLGFGAASLAGRTPNEDLSMKVETAYYSVGTLV
LSDSSPPAMSSLLVVSRDSSVHSQAGGSSASSSRSSRALREVVSSLPIEGRMLFVADVLP
SSDTAATVQSLYSELEYCGLEVSGESYEKACGKLWARGDLSTQHILPRRKIVIFTTMGMM
ELVFNRPVDILRRLLESNSPRSLLEDFFTRFGAGEAAAMCLMLAARIINFEDLISNIVAD
KAAEAFEDPRMVGMPQFDGSSGLSNTRTATGGFSMGQVVQEAEPIFSGAHEGLCLCTSRL
LFPLWELSVVSKKTSFDSMSEDGVVICRLSTSAMNVLESKIRSLEKFLRSRRNQRRGLYG
YVAGLGDVTGSILYGNGSELGATERNMVRNLFGAYSNGGESANKRQRLPYSPAELAATEV
RAMECIRQLLLRSAEALFLLQLLSQHHVARLVQGLDANLKQALVQLTFHQLVCSEEGDQI
ATRLISAVMEYYTGSDGRGTVDDISGRLREGCPSYFKESDYKFFLAVERLERAALTSDAE
EKENVAREAFSFLSKVPGSADLRTVCKRFEELRFYEAVVCLPLQKAQALDPAGDAFNDQI
DASIREHAIAQRKQCYEIIANALRSLASSMLDEASRRQYICQIVHLGVQSTDRAFREYLY
NAMIELGLENELLEYGGPDLVPFLQNAGSHSASEVAAVSSGSSPLGQSGTQISSNQAKYF
DLLAKYYVSKRQHVLAAHVLLRLAERRAIISGDNPILEQRRQYLSLAVLQAKNASNSDGL
VGSDQGASDSGLLDLLEGKLAVLQFQIKIRDKLEAMASNFESSVAMQESDQNEPVLDCGS
SDGSSLANAANEKAMELSLELKSITQLYNEYAVPFELWEICLEMLYFANYSADADSSIIK
ETWARLIEQALSQGGIAEACSVLKRVGSQIYPGDGAVLPLDVLCLHLEKAALERSERNEI
VGDEDIARALLAACKGAAEPVLNAYDRLLSNAAIVSSPNLRIRLLGSVLVVLLEWAMSVL
SDRMGSSPTRSSLILGGSFAHENKAVLNQGVRDKIASAANRYMTEVRRLTLPPTKTESIF
AGFKKLDESLLSPFSF
NT seq 4371 nt   +upstreamnt  +downstreamnt
atgtcacaagacgaggagattgtgatgcgggatgtgacgaacgcgggtctctgcgttggt
gaccgcattggccgagaagccgcatctcagctcgatcttgaagaagctctagaagcttcc
agatacgctagtcacccctattcgactcatcccagagagtggccgccgttaatcgaggtt
ggtgagacttgggaattgccttctgtacttatcgagaggtataatacagcaggtggggaa
gggacggccttgtgtggaatttttccagagattcgacgggcgtgggcatccgtcgacaat
tcattgtttctgtggcgtttcgacaaaagggatgggcaatgtcctgagtatagcggggag
gagcaggctatttgtgccgttggactagcgaaatgtagacctggagtttttgttgaagct
attcaatatcttttggtgctggcaactcctgttgagttggttcttgttggagtttgctgc
actgaaggacctgatggtagagatccttatgctgagatttcagtacagcctctgcctgac
tatactatatcatcagatggagtgactatgacatgcgttacgtgtaccaatagagggcgc
attttcatggctggacgtgatggtcatatatatgagctattatatacaactggttcaggc
tggcataaacgttgtcgtaaagtatgccttactgcaggtgttggtagtatgatctccagg
tgggttgtgccaaatgtgttcaagtttggagctgtagatcctgttgtagagatggtcgtt
gataatgaaaggcaaattttatatgcccgcactgaagagatgaaacttcaagcatatgtt
tttgggccaaatggggaaggccctcttaagaaggttgcagaagaaaggaatctgttaaat
cagaaggatgtgagccaaggaaatcgacagtcaacagcggcaggtcgatctaacaagcca
accatagtcagcatttcgccactgtccatgctggaatccaaatggttgcaccttgttgcg
gcgttatcagatggtaggaggatgtatctctccacctcttcaagtggaagtagtttcagt
gggttcaacaaccaccggcagactccaagctgtttgaaagtcgtttcaactaggccatct
cctccattgggggccggtgttgggcttggttttggagctgcatctcttgctggtagaacc
ccaaatgaggatctctccatgaaggttgaaacagcatattattctgttggaactcttgtc
ctttcagattcatcgccacctgctatgtcttctcttcttgttgttagcagagattcaagc
gtgcactctcaggctggcggcagttcagcttcaagttcaaggagttctcgggctttacgg
gaagttgtgtcctctctacccattgaaggccgtatgctttttgtagccgatgtgctcccc
tcttctgatactgctgctactgttcaatcattgtattcagaacttgaatactgtggactc
gaagtctcgggagagtcttatgaaaaggcatgtggaaaactctgggccagaggtgatctt
tcgacccagcatatcttgccaaggcgaaagattgtcatttttaccaccatgggtatgatg
gaactggtttttaatagacctgttgatatcttgagaagacttctagaatccaactctcca
aggtcccttctggaagattttttcacccgctttggagcaggcgaagcagctgccatgtgc
ttgatgttggctgcccggataataaattttgaagatctaattagtaacattgttgccgat
aaagcagctgaggcttttgaggatccgagaatggtaggcatgccacaatttgatggcagt
agtggattgtcaaatactagaacagcaactggaggtttcagcatgggccaagttgttcaa
gaagccgagcctatattttcaggtgcacacgaagggctctgcctttgtacgtcaagatta
ctgtttcccctgtgggaactttctgtggtgtctaaaaaaaccagttttgattccatgtct
gaggacggagtggtgatttgtcgtctttctaccagtgctatgaatgtgctggaaagcaag
attcgatcgttggagaaattcttaagatctagaaggaaccagagaagggggctttatgga
tatgttgctgggttaggagatgttacaggctctattttgtatggtaatggttcagagttg
ggtgctactgagaggaatatggttaggaacttgtttggagcatattccaatggaggcgag
tcagcaaataaaagacagcggttgccatatagtcctgctgaattggctgccacggaggtg
agggcgatggagtgtattaggcagttacttctcagatctgcagaagccctcttcctactt
caacttctctctcaacatcatgttgctagattagttcaggggcttgacgcaaacttaaag
caagctttggttcagttgacattccatcagttagtttgttctgaagagggcgaccaaatt
gcaacaagactcatatctgccgtgatggagtattataccggctcagatggcaggggaaca
gttgacgatattagcgggcggctacgtgaaggttgcccaagttacttcaaggagtcggat
tacaaattcttcttagctgttgaacgccttgaaagagctgctttaacttcagatgctgag
gagaaagagaatgttgctagagaggcgttcagtttcttgagtaaagtccctggatctgca
gatctcagaactgtctgcaaacgttttgaggaattgaggttctatgaagctgttgtctgt
ttgcctttgcagaaggcccaagcccttgatcctgctggcgatgctttcaatgaccaaatt
gatgcttccattagagagcatgctattgcccagcgaaaacaatgctatgaaattatcgct
aatgccttgcgatctctagctagttccatgctagatgaggcttcacgtagacaatatata
tgccaaatcgttcatcttggtgtgcaatcaactgacagagcattccgggagtacctatac
aacgccatgatagaactgggtcttgaaaatgagctcctggagtacggaggtccagatttg
gtaccttttctccagaatgctggcagtcattcggcatcagaggtcgcggctgtatcttct
ggatcatctccgctgggtcagtcaggaacacagatttcatcaaatcaagccaaatatttt
gatcttcttgcgaaatactatgtgtcgaagagacagcatgtgcttgctgctcatgtgctt
ctaaggcttgcggaaaggcgcgcaattatttcaggggacaatcctatccttgaacaaagg
cgacaataccttagcctcgcagttttacaggctaagaatgcaagtaatagcgatggttta
gtaggttctgatcaaggtgcttctgacagtgggttgcttgatctgcttgaaggaaaactc
gcagttcttcagttccaaataaagatcagagacaaacttgaagccatggcttcgaatttc
gagtcctcggttgccatgcaggagtctgaccagaatgagccagtacttgattgtggttct
agtgatggttccagcttagcaaatgcagcaaatgaaaaggccatggagctctccttggag
cttaaaagcataacgcagttgtataatgaatatgctgtcccatttgagctctgggagatc
tgtctggaaatgctctactttgccaactattctgctgatgctgattcaagcataataaag
gaaacatgggctagactcatcgagcaagctctttctcaaggtgggatagctgaagcatgt
tcagtactcaagagagtcggatctcagatatatcctggcgatggagctgttttaccgctc
gatgtcctgtgccttcacctcgagaaagctgcacttgagagatcagagaggaatgaaatt
gttggggatgaagacatagctcgagctctactagccgcctgcaaaggcgcagctgaaccc
gtgctcaacgcttatgaccgtttattatctaatgcagccattgtgtcgtcgccgaatcta
agaatccgcctccttggttcagttctggtggtgctccttgaatgggcaatgtcggtattg
tcagacagaatgggctcgagtccaacgaggtcttctttgatattaggtggctcgtttgca
catgagaacaaagccgttcttaaccaaggggtccgtgataagatcgcaagcgccgcaaac
aggtacatgacagaggttaggagactgactctgccaccgacgaagacggagagtatattc
gctggtttcaaaaaacttgacgagtctctcttaagtccattctccttctga

DBGET integrated database retrieval system