Eutrema salsugineum (saltwater cress): EUTSA_v10006562mg
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Entry
EUTSA_v10006562mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10006562mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10006562mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10006562mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
18993380
NCBI-ProteinID:
XP_006416964
UniProt:
V4KZ49
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MSQDEEIVMRDVTNAGLCVGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV
GETWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGE
EQAICAVGLAKCRPGVFVEAIQYLLVLATPVELVLVGVCCTEGPDGRDPYAEISVQPLPD
YTISSDGVTMTCVTCTNRGRIFMAGRDGHIYELLYTTGSGWHKRCRKVCLTAGVGSMISR
WVVPNVFKFGAVDPVVEMVVDNERQILYARTEEMKLQAYVFGPNGEGPLKKVAEERNLLN
QKDVSQGNRQSTAAGRSNKPTIVSISPLSMLESKWLHLVAALSDGRRMYLSTSSSGSSFS
GFNNHRQTPSCLKVVSTRPSPPLGAGVGLGFGAASLAGRTPNEDLSMKVETAYYSVGTLV
LSDSSPPAMSSLLVVSRDSSVHSQAGGSSASSSRSSRALREVVSSLPIEGRMLFVADVLP
SSDTAATVQSLYSELEYCGLEVSGESYEKACGKLWARGDLSTQHILPRRKIVIFTTMGMM
ELVFNRPVDILRRLLESNSPRSLLEDFFTRFGAGEAAAMCLMLAARIINFEDLISNIVAD
KAAEAFEDPRMVGMPQFDGSSGLSNTRTATGGFSMGQVVQEAEPIFSGAHEGLCLCTSRL
LFPLWELSVVSKKTSFDSMSEDGVVICRLSTSAMNVLESKIRSLEKFLRSRRNQRRGLYG
YVAGLGDVTGSILYGNGSELGATERNMVRNLFGAYSNGGESANKRQRLPYSPAELAATEV
RAMECIRQLLLRSAEALFLLQLLSQHHVARLVQGLDANLKQALVQLTFHQLVCSEEGDQI
ATRLISAVMEYYTGSDGRGTVDDISGRLREGCPSYFKESDYKFFLAVERLERAALTSDAE
EKENVAREAFSFLSKVPGSADLRTVCKRFEELRFYEAVVCLPLQKAQALDPAGDAFNDQI
DASIREHAIAQRKQCYEIIANALRSLASSMLDEASRRQYICQIVHLGVQSTDRAFREYLY
NAMIELGLENELLEYGGPDLVPFLQNAGSHSASEVAAVSSGSSPLGQSGTQISSNQAKYF
DLLAKYYVSKRQHVLAAHVLLRLAERRAIISGDNPILEQRRQYLSLAVLQAKNASNSDGL
VGSDQGASDSGLLDLLEGKLAVLQFQIKIRDKLEAMASNFESSVAMQESDQNEPVLDCGS
SDGSSLANAANEKAMELSLELKSITQLYNEYAVPFELWEICLEMLYFANYSADADSSIIK
ETWARLIEQALSQGGIAEACSVLKRVGSQIYPGDGAVLPLDVLCLHLEKAALERSERNEI
VGDEDIARALLAACKGAAEPVLNAYDRLLSNAAIVSSPNLRIRLLGSVLVVLLEWAMSVL
SDRMGSSPTRSSLILGGSFAHENKAVLNQGVRDKIASAANRYMTEVRRLTLPPTKTESIF
AGFKKLDESLLSPFSF
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagacgaggagattgtgatgcgggatgtgacgaacgcgggtctctgcgttggt
gaccgcattggccgagaagccgcatctcagctcgatcttgaagaagctctagaagcttcc
agatacgctagtcacccctattcgactcatcccagagagtggccgccgttaatcgaggtt
ggtgagacttgggaattgccttctgtacttatcgagaggtataatacagcaggtggggaa
gggacggccttgtgtggaatttttccagagattcgacgggcgtgggcatccgtcgacaat
tcattgtttctgtggcgtttcgacaaaagggatgggcaatgtcctgagtatagcggggag
gagcaggctatttgtgccgttggactagcgaaatgtagacctggagtttttgttgaagct
attcaatatcttttggtgctggcaactcctgttgagttggttcttgttggagtttgctgc
actgaaggacctgatggtagagatccttatgctgagatttcagtacagcctctgcctgac
tatactatatcatcagatggagtgactatgacatgcgttacgtgtaccaatagagggcgc
attttcatggctggacgtgatggtcatatatatgagctattatatacaactggttcaggc
tggcataaacgttgtcgtaaagtatgccttactgcaggtgttggtagtatgatctccagg
tgggttgtgccaaatgtgttcaagtttggagctgtagatcctgttgtagagatggtcgtt
gataatgaaaggcaaattttatatgcccgcactgaagagatgaaacttcaagcatatgtt
tttgggccaaatggggaaggccctcttaagaaggttgcagaagaaaggaatctgttaaat
cagaaggatgtgagccaaggaaatcgacagtcaacagcggcaggtcgatctaacaagcca
accatagtcagcatttcgccactgtccatgctggaatccaaatggttgcaccttgttgcg
gcgttatcagatggtaggaggatgtatctctccacctcttcaagtggaagtagtttcagt
gggttcaacaaccaccggcagactccaagctgtttgaaagtcgtttcaactaggccatct
cctccattgggggccggtgttgggcttggttttggagctgcatctcttgctggtagaacc
ccaaatgaggatctctccatgaaggttgaaacagcatattattctgttggaactcttgtc
ctttcagattcatcgccacctgctatgtcttctcttcttgttgttagcagagattcaagc
gtgcactctcaggctggcggcagttcagcttcaagttcaaggagttctcgggctttacgg
gaagttgtgtcctctctacccattgaaggccgtatgctttttgtagccgatgtgctcccc
tcttctgatactgctgctactgttcaatcattgtattcagaacttgaatactgtggactc
gaagtctcgggagagtcttatgaaaaggcatgtggaaaactctgggccagaggtgatctt
tcgacccagcatatcttgccaaggcgaaagattgtcatttttaccaccatgggtatgatg
gaactggtttttaatagacctgttgatatcttgagaagacttctagaatccaactctcca
aggtcccttctggaagattttttcacccgctttggagcaggcgaagcagctgccatgtgc
ttgatgttggctgcccggataataaattttgaagatctaattagtaacattgttgccgat
aaagcagctgaggcttttgaggatccgagaatggtaggcatgccacaatttgatggcagt
agtggattgtcaaatactagaacagcaactggaggtttcagcatgggccaagttgttcaa
gaagccgagcctatattttcaggtgcacacgaagggctctgcctttgtacgtcaagatta
ctgtttcccctgtgggaactttctgtggtgtctaaaaaaaccagttttgattccatgtct
gaggacggagtggtgatttgtcgtctttctaccagtgctatgaatgtgctggaaagcaag
attcgatcgttggagaaattcttaagatctagaaggaaccagagaagggggctttatgga
tatgttgctgggttaggagatgttacaggctctattttgtatggtaatggttcagagttg
ggtgctactgagaggaatatggttaggaacttgtttggagcatattccaatggaggcgag
tcagcaaataaaagacagcggttgccatatagtcctgctgaattggctgccacggaggtg
agggcgatggagtgtattaggcagttacttctcagatctgcagaagccctcttcctactt
caacttctctctcaacatcatgttgctagattagttcaggggcttgacgcaaacttaaag
caagctttggttcagttgacattccatcagttagtttgttctgaagagggcgaccaaatt
gcaacaagactcatatctgccgtgatggagtattataccggctcagatggcaggggaaca
gttgacgatattagcgggcggctacgtgaaggttgcccaagttacttcaaggagtcggat
tacaaattcttcttagctgttgaacgccttgaaagagctgctttaacttcagatgctgag
gagaaagagaatgttgctagagaggcgttcagtttcttgagtaaagtccctggatctgca
gatctcagaactgtctgcaaacgttttgaggaattgaggttctatgaagctgttgtctgt
ttgcctttgcagaaggcccaagcccttgatcctgctggcgatgctttcaatgaccaaatt
gatgcttccattagagagcatgctattgcccagcgaaaacaatgctatgaaattatcgct
aatgccttgcgatctctagctagttccatgctagatgaggcttcacgtagacaatatata
tgccaaatcgttcatcttggtgtgcaatcaactgacagagcattccgggagtacctatac
aacgccatgatagaactgggtcttgaaaatgagctcctggagtacggaggtccagatttg
gtaccttttctccagaatgctggcagtcattcggcatcagaggtcgcggctgtatcttct
ggatcatctccgctgggtcagtcaggaacacagatttcatcaaatcaagccaaatatttt
gatcttcttgcgaaatactatgtgtcgaagagacagcatgtgcttgctgctcatgtgctt
ctaaggcttgcggaaaggcgcgcaattatttcaggggacaatcctatccttgaacaaagg
cgacaataccttagcctcgcagttttacaggctaagaatgcaagtaatagcgatggttta
gtaggttctgatcaaggtgcttctgacagtgggttgcttgatctgcttgaaggaaaactc
gcagttcttcagttccaaataaagatcagagacaaacttgaagccatggcttcgaatttc
gagtcctcggttgccatgcaggagtctgaccagaatgagccagtacttgattgtggttct
agtgatggttccagcttagcaaatgcagcaaatgaaaaggccatggagctctccttggag
cttaaaagcataacgcagttgtataatgaatatgctgtcccatttgagctctgggagatc
tgtctggaaatgctctactttgccaactattctgctgatgctgattcaagcataataaag
gaaacatgggctagactcatcgagcaagctctttctcaaggtgggatagctgaagcatgt
tcagtactcaagagagtcggatctcagatatatcctggcgatggagctgttttaccgctc
gatgtcctgtgccttcacctcgagaaagctgcacttgagagatcagagaggaatgaaatt
gttggggatgaagacatagctcgagctctactagccgcctgcaaaggcgcagctgaaccc
gtgctcaacgcttatgaccgtttattatctaatgcagccattgtgtcgtcgccgaatcta
agaatccgcctccttggttcagttctggtggtgctccttgaatgggcaatgtcggtattg
tcagacagaatgggctcgagtccaacgaggtcttctttgatattaggtggctcgtttgca
catgagaacaaagccgttcttaaccaaggggtccgtgataagatcgcaagcgccgcaaac
aggtacatgacagaggttaggagactgactctgccaccgacgaagacggagagtatattc
gctggtttcaaaaaacttgacgagtctctcttaagtccattctccttctga
DBGET
integrated database retrieval system