Eutrema salsugineum (saltwater cress): EUTSA_v10006599mg
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Entry
EUTSA_v10006599mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EUTSA_v10006599mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10006599mg
Enzymes [BR:
eus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EUTSA_v10006599mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
EUTSA_v10006599mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
18992110
NCBI-ProteinID:
XP_006415532
UniProt:
V4K8B8
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MDVKEKKKDTVPKIEDFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPSTERKL
SIWLEDPRVYSPQKESLRSTSRKEALFPFECRQAKISYTGSLMAEICFRYDEDEYVVRDR
YEFGEFPIMLMSKLCHLRGADCRQLLKYKESTSEMGGYFILNGIERVFRCVIAPKRNHPT
GMVRNSFCGRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGAREYLLPVGV
VLKALTETNDEEIYENLTCCYNERYGRGDGAIGTQLIRERSKIILDEVRDLGLFTRDQCR
KYLGERFQPALDGLEKESYPTVAEAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTS
LPDNPDSLQNQEILVPGHLITIYLKEKLEEWLRKCKSLIEDEFNRSKKFSFETIADVKKI
INKNPPRSIGMSIETLLKSGRLNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGAS
FAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSQFDSNGNIRDFLKIR
KSVVDVLVGVGMVPSLPKLVRAGPPKVITVLLDGQVVGSLSSNLVTEVVAYLRRLKVEAP
SVIPEDLEVGYVPTSMGGSYPGLYLASCPSRFIRPVKNNSVPSDNIELVGPFEQVFMEIS
CPDGGNGGRNNSSTATHEEIHPTGIISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQ
ALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNK
SSVERGMCHGQIYQTETVDLSDQRSRSDNGNQSFRRSKVDKSAHSCIDADGLPYIGQKIY
PNEPYCSIYDGVTNSIKTMKRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGDK
FSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLR
GEFVDATPFRDAVKKPNGEEESKSSLLVDDLGSMLKEKGFNYYGTETLYSGYLGVELKCE
IFMGPVYYQRLRHMVSDKFQVRSTGLVDQLTRQPIKGRKRGGGIRFGEMERDAMLAHGAS
YLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQDIGKLPPGRTPKKVTCDSCK
TSKGMETVAMPYVFRYLAAELAAMNIKVTLQLSGREGSDRKVV
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaagagaagaagaaagacacggttccaaagatcgaagactttacggagctt
cacaatctggtcacgcatcacatagaatcgttcgattacatgacagagaaaggactcgct
gttatgttcagtcgaatcaaacccgttacagtttacgaaccatccactgagaggaagctg
agcatctggttagaggaccctagagtttactctcctcagaaggagagtttgaggtcaaca
tcaaggaaagaggctttgtttccctttgagtgtaggcaggcgaagatttcttacacggga
tcgcttatggctgaaatttgctttagatatgatgaggatgaatacgtcgtgagagataga
tatgagtttggggaatttcctattatgctgatgtcaaagctctgccatttacggggtgct
gattgccggcaactgttaaagtataaagagtcaacttctgaaatgggagggtactttatt
ttgaatgggatcgagagggtgttccgatgtgttattgcaccaaagcggaaccatccaacg
ggtatggtgcggaactcattctgtggtcgccgggaaggatacagtgataaggcagttgcc
attaggtgtgttagggacgaccagtcatctgtcactgttaaactgtattatcttcgaaat
ggaagtgctagagttggattttggataggggcaagggaatatttgcttcctgttggcgtt
gttctcaaggctctcactgaaaccaacgatgaggaaatatacgaaaacttgacctgttgc
tacaatgagcgttacggaagaggcgacggagctattggaacccaactcattcgtgagaga
tccaaaattattcttgatgaagtgagagacttgggtctttttacccgagatcagtgccgg
aaatacttaggagagcgttttcaacctgctcttgatgggctagaaaaagaaagctatcct
actgttgctgaagccgtgctcaagaattatatatttgttcaccttgacaacgatgacgac
aagttcaatttgctcatcttcctaattcagaagctcttttctctggtggatcagacttct
ttaccggacaatccggattctctgcaaaatcaggaaattttagtccccggtcaccttata
acaatttacctcaaggaaaaactcgaagagtggctgcggaagtgcaaaagtcttattgaa
gatgagttcaacagaagcaagaaattttcctttgagacaattgctgatgtcaagaagatt
attaacaaaaatcctcccaggagtattggtatgtcaattgaaacattgttgaaatcagga
aggcttaatacgcagtctggtttggatttacagcagagagcaggttacactgtgcaggct
gagagactgaactttctccgtttcctctcatttttccgggctgttcatcgtggtgcttct
tttgctggacttcgtacaacaactgtgaggaagctgcttcctgaatcttggggttttctt
tgccctgttcacactcctgatggggaaccctgtggattactgaaccatatgactcgtact
tgccgaatcacttctcaattcgattccaacggaaacatcagagattttctgaaaataaga
aagtcagttgttgatgttcttgttggggttggaatggtaccttcattgccaaaacttgta
cgagctggaccaccaaaagtaattactgttcttttagatggtcaagttgtgggatcacta
tcgtctaacttagttacggaggttgtcgcttatttgcggagactgaaagtggaggctcct
tcagtgattcccgaagacctcgaagtgggatatgtacctacaagcatgggtggatcttat
cctggattgtatttggcatcatgtccttcaagattcattaggcctgttaaaaataattct
gttccctctgacaatattgagctagttggaccatttgagcaggtttttatggaaataagc
tgtcctgatggtggcaatggaggaaggaataactcttctacagcaactcatgaggaaatt
catccaacaggaataataagtgtagtagctaatcttacaccttggtcagatcataatcaa
agtccacgtaacatgtatcagtgtcagatggcgaaacaaaccatggcgtactctactcaa
gcactccaatttcgtgctgaccagaagatttaccacttgcagactcctcaatcccccgtg
gtgcgcacgaaaacatacaccacgtacagcattgatgagaatccaacagggactaatgca
atagttgctgtcctggctcatactggatttgatatggaagatgctatgattttgaacaaa
tcatctgtggagcgggggatgtgccatgggcaaatatatcagacagaaactgttgatctg
tcagatcagagaagccgatcggataatggtaatcaaagtttcaggagaagtaaagttgac
aaatcagctcattcttgtattgatgctgatgggttgccatatattggacagaaaatatat
ccaaatgagccgtactgtagtatctatgatggggtaactaactcgataaagaccatgaag
cgaaaaggcaccgaccctgtcatagttgactttgtctctgttgacatgaaaagcaagaag
catcctcaaaaggcgaatatccgatttcggcatgccagaaatcccataatcggtgacaaa
ttcagcagtagacacgggcaaaagggtgtttgctcgcaattgtggcctgatattgatatg
ccatttaacggagttactggaatgcgtccagatctcatcattaacccgcatgctttccca
tcaagaatgacaatcgctatgcttttggaatctattgctgccaagggaggtagtttgcgt
ggagagtttgtagatgcaacgccgtttcgtgatgcagtaaaaaaaccaaacggagaagag
gagagcaaatccagtctgcttgttgatgatcttggttccatgttgaaggaaaaaggattc
aactactatgggacagagacattatacagtgggtatttaggagtagagctgaagtgtgag
atatttatggggcctgtttactaccaaagactacgtcacatggtctcagacaaattccag
gttagatccacaggactagtggatcagctaactcgtcagccaatcaagggaaggaaacga
gggggagggattcgatttggtgaaatggaaagagacgcaatgcttgctcatggagcttcg
tatctattacacgacaggctccacacctcatcagatcaccacattgcagatgtgtgttcg
ctatgtggaagcttgctcacatcttcggttgtgaacgttcaacagaagaagctgattcaa
gatattggaaagttacctcctggcaggactccaaagaaggtaacttgcgattcgtgcaag
acaagcaaagggatggaaactgttgcaatgccatatgtgttcaggtacttagctgcagaa
ttggcggcaatgaatattaaggtgactcttcagttaagcggcagagaaggaagcgataga
aaagtagtctaa
DBGET
integrated database retrieval system