Eutrema salsugineum (saltwater cress): EUTSA_v10006600mg
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Entry
EUTSA_v10006600mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EUTSA_v10006600mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10006600mg
Enzymes [BR:
eus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EUTSA_v10006600mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
EUTSA_v10006600mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBCV_P4
Motif
Other DBs
NCBI-GeneID:
18992111
NCBI-ProteinID:
XP_006415533
UniProt:
V4MQB8
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MVDKLKDSVPKLEDFKELHNLVTHHIESFDYMTEKGLAVMFNRIKPVSVYDSGNKLSIWL
DNPVVYPPQKESPSSTSRQEALFPFECRQAKISYTGKLMAEVCLQYNDEPPVIRDKFDFG
ELPIMLMSKLCNLRGADCRKLLKYKEATSEMGGYFILKGIEKVFRCVIAPKRNHPMGMVR
NSFIHRQEGFSDKAVSIRCVRDDQSSVTIKLYYVRNGSARVGFWLGGKEYLLPVGIVLKA
LTETNDEEIYENLNCCYNERFERCDGAIGTQLVRERSKIILDEVRDLGLFTRDQCRKYLG
ERFQPALDGLEKESYPTVADAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTSLPDN
PDSLQNQEILVPGHLITIYLKEKLEVWLRKCKSIIEQEFGNNKSKKYSFESHADVKKLMN
RNPSSSIGTSIGTFLTRGEIHTQYGLDFPESKGFTVQAERLNFIRFLSFFRAVHRGASFA
DLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTCRITSQFDSNGNIRDFQKIRKS
VVDVLVGVGMVCSLPKLVRAGPPKVIPVLLDGQVVGSLSSNLVTEVVAYLRKLKVEAPSV
IPEDLEVGYVPTSMGGSYPGLYLASCPSRFIRPVKNKSVPSDNIELIGPFEQVFMEISCP
DGGNGGRNNSSPATHEEIDPTGMLSVVANLTPWSNHNQSPRNMYQCQMAKQTMAFSTQAL
QFRADQKIYHLQTPQSPVVRTETYTTYSIDENPTGTNAIVAVLSHTGFDMEDAMILNKSS
VERGMCHGQIYQTETVDLSDQRSRSENAHKSFRRSKVDKSAHSCIDADGLPYVGQKIYPN
EPYCSIHDGVTNSIKTIKRKGTDPVVVDFVSVDMKSKTHPQKANIRFRHARNPIIGDKFS
SRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIGAKGGSLRGE
FVDATPFRDAVKKPNGEEKSESSLLVDDLGSMLKEKGFNYYGTETLYSGYLGVELKCEIF
MGPVYYQRLRHMVSDKYQVRSTGLVDQLTRQPIKGRKRGGGIRFGEMERDAMLAHGASYL
LHDRLHTSSDYHIADVCSLCGGLLTCSVVNVQQKKLIQGIGKLPPGRTPKKVTCDSCKTS
KGMETVAMPYVFRYLVAELAAMNIKMTLQLSDREGSNREGV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggttgacaaactgaaagactcggttccaaaactcgaagactttaaggagcttcacaat
ctcgtcacgcatcacatagaatcgttcgattacatgacggagaaaggactcgctgttatg
ttcaatcgaatcaagcccgtttcggtttacgattctgggaacaagctgagcatctggtta
gataaccctgtagtgtaccctcctcagaaagagagtcccagttcaacatcaaggcaagag
gctttgtttcccttcgagtgtaggcaggcgaagatttcttacacgggaaagcttatggct
gaggtttgcttacaatacaatgacgaaccaccagtcattagagataaatttgatttcggg
gaattacctattatgctgatgtcaaagctctgcaacttacggggtgctgattgccggaaa
ctgttaaagtataaagaagcaacttctgaaatgggagggtactttattttgaaagggatt
gagaaggtgttccgatgtgttattgcaccaaagcggaaccatccaatgggtatggtacgg
aattcattcattcatcgccaggaaggattcagtgataaggcagtttctattaggtgtgtt
agggacgaccagtcatctgtcactattaaactgtattatgttcgaaatggaagtgccaga
gttggattttggttaggtggaaaggaatatttgctacctgtcggcattgttctcaaggct
ctcactgaaaccaacgatgaagaaatatatgaaaacctgaattgttgctacaatgagcgt
tttgaaagatgcgatggtgctattggaacgcaactagttcgtgagagatccaaaattatt
ctagatgaagtgagagacttgggtctttttacccgggaccagtgccggaagtacttagga
gagcgttttcaacctgctcttgatgggctagaaaaagaaagctatcctactgttgctgat
gccgtgctgaagaattatatatttgttcaccttgacaacgatgacgacaagttcaatttg
ctcatcttcctaattcagaagctcttttctctggtggatcagacttctttaccggacaat
cctgattctctgcaaaatcaggaaattttagtccccggtcaccttataacaatctacctc
aaggaaaaacttgaagtgtggctgcggaagtgcaaaagtattattgaacaggagtttggt
aacaacaagagcaagaaatattcttttgaaagccatgctgatgtaaagaagcttatgaac
agaaatccttccagcagtattggtacgtcaattgggacatttttgacaagaggagaaatt
catacgcagtatggtttggatttcccggagagcaaaggtttcactgttcaagctgagaga
ttgaactttatccgtttcctatcatttttccgggcggttcatcgaggtgcttcttttgcg
gatcttcgtacaacaactgtgagaaagctgcttcctgaatcttggggttttctgtgccct
gttcacaccccggatggaacaccctgtggattactgaatcatatgactcgtacttgccga
atcacttctcaatttgattcgaatggaaacatcagagattttcagaagataagaaaatcg
gttgttgatgttctggttggggttgggatggtatgttcattgccaaaacttgtacgagct
ggaccaccaaaagtcattcctgttcttttagatggtcaagtagtaggatcactatcttct
aacttagttacggaagttgttgcttatttgcggaaactgaaagttgaggctccttcagtg
attcctgaagacctcgaagtgggatacgtacctacaagcatgggtggatcttatcctgga
ttgtatttggcatcatgcccctcaagattcattaggcctgttaaaaataaatctgttccc
tctgacaatattgagttaattggaccatttgagcaggtttttatggaaataagctgtcct
gatggtggcaatggaggaaggaataactcttctccagcaactcatgaggaaattgatcca
acagggatgctaagtgtggtagctaatcttacgccttggtcaaatcataatcaaagtcca
cgtaacatgtatcagtgtcagatggcgaaacaaaccatggcattctctactcaagcactc
caatttcgtgctgaccagaagatttaccacttgcagactcctcaatcccccgtggtgcgc
acggaaacatacaccacatacagtattgatgagaatccaacagggactaatgcaatagtt
gctgtcctctctcatactggatttgacatggaagatgcgatgattttgaacaaatcatct
gtggagcgggggatgtgccatgggcaaatatatcagacggaaactgttgatctgtcagat
cagagaagccgatcagaaaatgcacataaaagtttcaggagaagtaaagttgacaaatca
gctcattcttgtattgatgctgatgggttgccatatgttggacagaaaatatatccaaat
gagccgtactgtagtatccatgacggggtaactaactcaataaagaccattaagcgcaaa
ggcaccgaccctgtcgtagttgactttgtctctgttgacatgaaaagcaagacgcatcct
caaaaggcgaatattcgatttcgtcatgccagaaatcccataatcggtgacaaattcagc
agtagacacgggcaaaagggtgtttgctcgcaattgtggcctgatattgatatgccattt
aatggagttactggaatgcgtccagatcttatcattaacccgcatgctttcccatcaaga
atgacaatcgctatgcttttggaatctattggtgccaagggaggtagtttgcgtggagag
tttgtagatgcaacgccgtttcgtgatgcagtaaaaaaaccaaacggggaagagaagagc
gaatccagtctacttgttgatgatcttggttccatgttgaaggaaaaagggttcaactac
tatgggactgagacattatacagtgggtatttaggagtagagctcaagtgcgagatattt
atggggcctgtttattaccaaagactacgtcacatggtctcagacaaataccaggttaga
tccacaggactagtggatcagctaactcgccagccaatcaagggaaggaaacgaggtgga
gggattcgatttggtgaaatggaaagagatgcaatgcttgctcatggagcttcctatcta
ttacacgacaggctccatacctcttcagattaccacattgcagatgtgtgttcgctatgt
ggaggcttgctcacatgttcggttgtgaacgttcaacagaagaagctgattcaaggtatt
ggaaagttacctcctggcaggactccaaagaaggtaacttgcgattcgtgcaagacaagc
aaagggatggaaactgttgcaatgccatatgtgttcaggtacttagttgcagaattggcg
gcaatgaatattaagatgactcttcagttaagcgacagagaaggaagcaatagagaagga
gtctag
DBGET
integrated database retrieval system