KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10006600mg
Entry
EUTSA_v10006600mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EUTSA_v10006600mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eus03021]
    EUTSA_v10006600mg
Enzymes [BR:eus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EUTSA_v10006600mg
Transcription machinery [BR:eus03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     EUTSA_v10006600mg
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 PBCV_P4
Other DBs
NCBI-GeneID: 18992111
NCBI-ProteinID: XP_006415533
UniProt: V4MQB8
LinkDB
Position
Unknown
AA seq 1181 aa
MVDKLKDSVPKLEDFKELHNLVTHHIESFDYMTEKGLAVMFNRIKPVSVYDSGNKLSIWL
DNPVVYPPQKESPSSTSRQEALFPFECRQAKISYTGKLMAEVCLQYNDEPPVIRDKFDFG
ELPIMLMSKLCNLRGADCRKLLKYKEATSEMGGYFILKGIEKVFRCVIAPKRNHPMGMVR
NSFIHRQEGFSDKAVSIRCVRDDQSSVTIKLYYVRNGSARVGFWLGGKEYLLPVGIVLKA
LTETNDEEIYENLNCCYNERFERCDGAIGTQLVRERSKIILDEVRDLGLFTRDQCRKYLG
ERFQPALDGLEKESYPTVADAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTSLPDN
PDSLQNQEILVPGHLITIYLKEKLEVWLRKCKSIIEQEFGNNKSKKYSFESHADVKKLMN
RNPSSSIGTSIGTFLTRGEIHTQYGLDFPESKGFTVQAERLNFIRFLSFFRAVHRGASFA
DLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTCRITSQFDSNGNIRDFQKIRKS
VVDVLVGVGMVCSLPKLVRAGPPKVIPVLLDGQVVGSLSSNLVTEVVAYLRKLKVEAPSV
IPEDLEVGYVPTSMGGSYPGLYLASCPSRFIRPVKNKSVPSDNIELIGPFEQVFMEISCP
DGGNGGRNNSSPATHEEIDPTGMLSVVANLTPWSNHNQSPRNMYQCQMAKQTMAFSTQAL
QFRADQKIYHLQTPQSPVVRTETYTTYSIDENPTGTNAIVAVLSHTGFDMEDAMILNKSS
VERGMCHGQIYQTETVDLSDQRSRSENAHKSFRRSKVDKSAHSCIDADGLPYVGQKIYPN
EPYCSIHDGVTNSIKTIKRKGTDPVVVDFVSVDMKSKTHPQKANIRFRHARNPIIGDKFS
SRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIGAKGGSLRGE
FVDATPFRDAVKKPNGEEKSESSLLVDDLGSMLKEKGFNYYGTETLYSGYLGVELKCEIF
MGPVYYQRLRHMVSDKYQVRSTGLVDQLTRQPIKGRKRGGGIRFGEMERDAMLAHGASYL
LHDRLHTSSDYHIADVCSLCGGLLTCSVVNVQQKKLIQGIGKLPPGRTPKKVTCDSCKTS
KGMETVAMPYVFRYLVAELAAMNIKMTLQLSDREGSNREGV
NT seq 3546 nt   +upstreamnt  +downstreamnt
atggttgacaaactgaaagactcggttccaaaactcgaagactttaaggagcttcacaat
ctcgtcacgcatcacatagaatcgttcgattacatgacggagaaaggactcgctgttatg
ttcaatcgaatcaagcccgtttcggtttacgattctgggaacaagctgagcatctggtta
gataaccctgtagtgtaccctcctcagaaagagagtcccagttcaacatcaaggcaagag
gctttgtttcccttcgagtgtaggcaggcgaagatttcttacacgggaaagcttatggct
gaggtttgcttacaatacaatgacgaaccaccagtcattagagataaatttgatttcggg
gaattacctattatgctgatgtcaaagctctgcaacttacggggtgctgattgccggaaa
ctgttaaagtataaagaagcaacttctgaaatgggagggtactttattttgaaagggatt
gagaaggtgttccgatgtgttattgcaccaaagcggaaccatccaatgggtatggtacgg
aattcattcattcatcgccaggaaggattcagtgataaggcagtttctattaggtgtgtt
agggacgaccagtcatctgtcactattaaactgtattatgttcgaaatggaagtgccaga
gttggattttggttaggtggaaaggaatatttgctacctgtcggcattgttctcaaggct
ctcactgaaaccaacgatgaagaaatatatgaaaacctgaattgttgctacaatgagcgt
tttgaaagatgcgatggtgctattggaacgcaactagttcgtgagagatccaaaattatt
ctagatgaagtgagagacttgggtctttttacccgggaccagtgccggaagtacttagga
gagcgttttcaacctgctcttgatgggctagaaaaagaaagctatcctactgttgctgat
gccgtgctgaagaattatatatttgttcaccttgacaacgatgacgacaagttcaatttg
ctcatcttcctaattcagaagctcttttctctggtggatcagacttctttaccggacaat
cctgattctctgcaaaatcaggaaattttagtccccggtcaccttataacaatctacctc
aaggaaaaacttgaagtgtggctgcggaagtgcaaaagtattattgaacaggagtttggt
aacaacaagagcaagaaatattcttttgaaagccatgctgatgtaaagaagcttatgaac
agaaatccttccagcagtattggtacgtcaattgggacatttttgacaagaggagaaatt
catacgcagtatggtttggatttcccggagagcaaaggtttcactgttcaagctgagaga
ttgaactttatccgtttcctatcatttttccgggcggttcatcgaggtgcttcttttgcg
gatcttcgtacaacaactgtgagaaagctgcttcctgaatcttggggttttctgtgccct
gttcacaccccggatggaacaccctgtggattactgaatcatatgactcgtacttgccga
atcacttctcaatttgattcgaatggaaacatcagagattttcagaagataagaaaatcg
gttgttgatgttctggttggggttgggatggtatgttcattgccaaaacttgtacgagct
ggaccaccaaaagtcattcctgttcttttagatggtcaagtagtaggatcactatcttct
aacttagttacggaagttgttgcttatttgcggaaactgaaagttgaggctccttcagtg
attcctgaagacctcgaagtgggatacgtacctacaagcatgggtggatcttatcctgga
ttgtatttggcatcatgcccctcaagattcattaggcctgttaaaaataaatctgttccc
tctgacaatattgagttaattggaccatttgagcaggtttttatggaaataagctgtcct
gatggtggcaatggaggaaggaataactcttctccagcaactcatgaggaaattgatcca
acagggatgctaagtgtggtagctaatcttacgccttggtcaaatcataatcaaagtcca
cgtaacatgtatcagtgtcagatggcgaaacaaaccatggcattctctactcaagcactc
caatttcgtgctgaccagaagatttaccacttgcagactcctcaatcccccgtggtgcgc
acggaaacatacaccacatacagtattgatgagaatccaacagggactaatgcaatagtt
gctgtcctctctcatactggatttgacatggaagatgcgatgattttgaacaaatcatct
gtggagcgggggatgtgccatgggcaaatatatcagacggaaactgttgatctgtcagat
cagagaagccgatcagaaaatgcacataaaagtttcaggagaagtaaagttgacaaatca
gctcattcttgtattgatgctgatgggttgccatatgttggacagaaaatatatccaaat
gagccgtactgtagtatccatgacggggtaactaactcaataaagaccattaagcgcaaa
ggcaccgaccctgtcgtagttgactttgtctctgttgacatgaaaagcaagacgcatcct
caaaaggcgaatattcgatttcgtcatgccagaaatcccataatcggtgacaaattcagc
agtagacacgggcaaaagggtgtttgctcgcaattgtggcctgatattgatatgccattt
aatggagttactggaatgcgtccagatcttatcattaacccgcatgctttcccatcaaga
atgacaatcgctatgcttttggaatctattggtgccaagggaggtagtttgcgtggagag
tttgtagatgcaacgccgtttcgtgatgcagtaaaaaaaccaaacggggaagagaagagc
gaatccagtctacttgttgatgatcttggttccatgttgaaggaaaaagggttcaactac
tatgggactgagacattatacagtgggtatttaggagtagagctcaagtgcgagatattt
atggggcctgtttattaccaaagactacgtcacatggtctcagacaaataccaggttaga
tccacaggactagtggatcagctaactcgccagccaatcaagggaaggaaacgaggtgga
gggattcgatttggtgaaatggaaagagatgcaatgcttgctcatggagcttcctatcta
ttacacgacaggctccatacctcttcagattaccacattgcagatgtgtgttcgctatgt
ggaggcttgctcacatgttcggttgtgaacgttcaacagaagaagctgattcaaggtatt
ggaaagttacctcctggcaggactccaaagaaggtaacttgcgattcgtgcaagacaagc
aaagggatggaaactgttgcaatgccatatgtgttcaggtacttagttgcagaattggcg
gcaatgaatattaagatgactcttcagttaagcgacagagaaggaagcaatagagaagga
gtctag

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