Eutrema salsugineum (saltwater cress): EUTSA_v10006625mg
Help
Entry
EUTSA_v10006625mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12120
phytochrome A
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
EUTSA_v10006625mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_9
HATPase_c
PAS_4
HisKA
PAS_8
Yop-YscD_ppl_3rd
EH
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
18993921
NCBI-ProteinID:
XP_006417561
UniProt:
V4KDV1
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MSASRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP
PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH
PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSTKPFYAIIHRVTGSIIV
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM
AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV
LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL
CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT
DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD
DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII
HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEA
IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTLLSRADAGPISLVVNACASRD
LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP
AMSKLTGLKREEVMDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQEAEKVSFA
FFTKGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALTRLKAL
AYIKRQIRNPLSGIMFTRKMMEGTELGPEQRRILQTSALCQKQLSKILDDSDLDSIIEGC
LDLEMKEFNLNEVLTASTSQVMMKSNGKSVRITNDTGEEIMSDTLYGDSIRLQQVLADFM
LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIRITHTGAGLPEFLLNQMFGTEEDVS
EEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIISAELAAANK
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttctaggccgagtcagtcctctgaggggtcgaggcgatcaagacacagcgct
cggatcattgcgcagaccactgtagatgccaagctccatgctgattttgaggagtcgggc
agttcctttgattactcaacctcagtgcgtgtcactggcccggttgtggagaaccagcca
ccgaggtctgacaaggtgaccacgacttatcttcatcacatacagaaaggaaagctgatt
cagccctttggttgtttgcttgctttggatgagaagaccttcaaagtcattgcatacagc
gagaatgctcctgagctgttgacaatggccagtcatgcagttcctagtgttggcgaacac
cctgttctaggcattgggacggatattaggagtcttttcactgctcctagtgcctcggcg
ttgcagaaagcccttggatttggagatgtctccctgttgaatcccattcttgtgcactgc
aagacttctacaaagcccttttatgcgataatccacagggttacagggagcatcatcgtc
gactttgaaccagtgaagccttatgaagttcccatgacagctgctggtgccttgcaatca
tacaagctcgctgctaaagccatcactaggctacaatctttgcccagcggaagcatggaa
aggctttgtgacacgatggctcaggaggtttttgaactcactgggtatgacagggtgatg
gcttataagtttcatgacgatgatcacggtgaggttgtctccgaggtgacaaagcctggg
ctggagccttatcttggacttcattatccagctactgacatccctcaagcagcccgcttt
ctgtttatgaagaacaaggttcggatgatcgttgattgcaatgcaaaacatgttagggtg
cttcaagatgaaaagctttcctttgatcttaccttgtgcggctccacccttagggcacca
cacagctgccatttgcagtacatggccaacatggattcaatagcatctctggttatggcg
gttgtagttaacgaggaagatggagaaggggatgcgcctgattctactacacagcctcaa
aagagaaagagactatggggtttggtggtttgtcataacacgactcccaggtttgttccg
tttcctctcaggtatgcctgtgagtttctagctcaagtgtttgctatacacgtcaacaag
gaggtggaactggagaatcagattgtggagaagaacattttgcgcacacagacactcttg
tgcgatatgctgatgcgtgatgctccgctgggtattgtgtcacagagccctaacataatg
gaccttgtgaaatgtgatggagcagctctcttgtataaagacaagatatggaaactggga
acaactccaagcgagttccatctgcaggagatagcttcatggttgtgtgaataccacacg
gattcaacgggtttgagcactgatagcttgcatgatgctgggtttcctagggctctatct
cttggggattcagtatgtggaatggcggctgtgaggatatcatcgaaagacatgattttc
tggttccgttctcataccgctggtgaagtgagatggggaggtgcaaagcatgatccagat
gacagggatgatgcaaggagaatgcacccgagatcatcgttcaaggctttccttgaagtg
gtcaagacaaggagtttaccttggaaggactatgagatggatgccatacactcgttgcag
ctgattctgaggaatgctttcaaggatggcgaaactactgatgtgaatacgaagatcatc
cactcgaagcttaatgatctaaaaatcgatggtatacaagaactagaagctgtgaccagt
gagatggttcgtttaattgaaactgctacggtcccaatattggcggttgattctgatgga
ttgattaatggctggaacacgaaaattgctgagctgactggtcttccggttgatgaagca
atcgggaagcatctcctcacacttgttgaagattcttcagtggaaatcgttaaaaggatg
ctagagaatgctctcgaaggaaccgaggagcagaatgtccaatttgagatcaagacgcta
ctgtcaagagctgatgctgggccaataagtttagttgtaaatgcatgtgcaagtagagat
ctccatgaaaacgtggttggggtgtgttttgtagcccatgatcttactggacagaagact
gtgatggacaagtttactcgaattgaaggtgattacaaggccatcatccagaatccaaac
ccgcttatcccgcccatatttggtaccgacgagttcgggtggtgcactgagtggaatcca
gcaatgtcaaagttaacaggtttaaagcgagaggaagtaatggacaagatgctgctagga
gaagtctttgggacgcagaagtcatgttgtcgtctaaagaatcaagaagcatttgtaaac
cttgggattgtgctaaataatgctgtgaccagtcaggaagcagagaaagtgtcctttgct
ttctttacaaaaggcggaaagtatgtggagtgtctgttgtgtgtgagtaagaaactggac
agggaaggtgtagtgacaggcgtcttctgtttcctgcaacttgccagccatgagttgcag
caagccctccatgttcagcgtctagctgagcgaactgcattgacaagactaaaggctctg
gcttacattaaaagacagatcagaaacccgctctccggaatcatgtttacaaggaaaatg
atggagggcactgagttaggaccagagcagagacggattttgcaaactagcgctttgtgt
cagaagcaactcagcaagatccttgatgattcggaccttgacagcatcattgaagggtgc
ttggatctggaaatgaaagaattcaacttaaacgaagtgttaactgcttccacgagtcaa
gtaatgatgaagagtaacggaaagagcgttcgaataacaaatgataccggagaagaaata
atgtctgatactttgtacggagacagcattagacttcaacaagtcttggcagatttcatg
ctcatgtctgttaactttacaccatccggtggtcagctaactgttacagcttccctgagg
aaagatcagctcgggcgatctgtgcatcttgcttatttagagatcaggataacgcatact
ggagctgggttaccagagtttttgctaaaccaaatgtttgggactgaggaagatgtgtca
gaggaaggattaagcttaatggttagccggaaactggtgaagctgatgaatggagatgtg
cagtacttgagacaagctgggaaatctagtttcattatctctgcggaactcgctgcagcg
aacaagtag
DBGET
integrated database retrieval system
