Eutrema salsugineum (saltwater cress): EUTSA_v10006652mg
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Entry
EUTSA_v10006652mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10006652mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10006652mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10006652mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10006652mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EUTSA_v10006652mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
18993840
NCBI-ProteinID:
XP_006417471
UniProt:
V4KWT4
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MFGSSNPFGQSSGSSPFGSQSLFGQTSNSSSNNPFAPATPFGSSAPFAAQTGSSIFGGTS
TGVFGAPQTSSPFASTTTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQ
SNPFGSTAQQSQPAFGNSTFGSSTPFGATSTPAFGASSTPSFGATSTPSFGASSTPAFGA
TSTPAFGASNQPSFGVTSTPAFGASPTPAFGNTGTTFGNTGFGSGGAFGASSSPAFGASG
TPAFGASGAPAFGASSTPAFGASSTPAFGASSTPAFGASSTPTFGASNTSSFSFGSSPAF
GQSTSAFGSSAFGSTPSPFGAQGAQATTPTFGGSGFGQSPFGGQQQGGSRAVPYAPTVEA
DTGSGTQPAGKLESISAMPAYKDKSHEELRWEDYQRGDKGGPNPSGQSPGNAGFGVSTAQ
PNPFSSSPPFGQTSANPTNPFSSATSTNPFAPQTPTIASSGFGAATSNFGSSPFGVTSSS
NLFGSTSSTATSVFGSSSAFGTTTSSPLFGSSSTPGFGSSSSIFGSNPGQGATPAFGNTQ
SSTLFSSNPSTGQTGSAFGQTGSAFGQFGQSSAPAFGQTNIFNKPSTGFGNMFSSSSTLT
TSSSSPFGQTMPAGMTPFQSAQPGQASNGFGFNNFGQTQAANASGNAGGLGFFGQGNFGQ
TPAPLSSVVLQPVAVTNPFGTLPAMPQISINQSGNSPSIQYGISSMPVVDKPAPVRISSL
LTSRHLLQRRVKLPARKYRPGDNGPKVPFFTDDEETSSTPKADALFIPRENPRALVIRPI
QQWSSRDKSTIPKDRPTAPLHDNGKSPDIATDAANHDRNDNGESGSAGERTHPSVDANQK
SNGTTRTDHAKDKERPYRTLGGHRAGEAAIVYEHGADIEALMPKLRQSDYFTEPRIQELA
AKERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLDLESLVQFNNREVIVYMDESKKP
AVGQGLNKPAEVTLLNIKCVDRKTGKQFTEGERVEKYKMMLKRKAEAQGAEFVSFDPVKG
EWKFRVDHFSSYKLGDEDEDEG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcatctaatccttttggacagtcatctggtagcagcccatttgggtcccag
tctttgtttggtcagaccagcaattcaagtagtaataatccctttgctccagcaacaccg
tttggctcgtctgcaccttttgctgcacagacagggagttcaatttttggaggcacttca
accggtgtgtttggtgcacctcaaacctcctctccattcgcctccactacaacttttgga
gcttcttcatctccagcatttgggaattccactccggcctttggagcatctccagcatct
tcaccttttggtgggtcttctggttttgggcagaaacctttgggattttcaacgcctcag
tcgaatccttttggaagcaccgcacagcaatcacaacctgcatttggaaacagcactttt
ggttcatctacaccttttggtgccactagcacgcctgccttcggtgcatcaagcacgcct
tcctttggtgccacaagcacaccctcgtttggtgcatcgagcacgcctgcctttggtgcc
acaagtactcctgcctttggcgcctcaaaccaaccttcctttggcgtcactagcacacct
gcatttggcgcgtccccgactccagcatttggcaacactggcaccacgtttggcaacact
ggctttggttctggaggtgcatttggagcttctagcagccctgcatttggtgcatcaggc
actcctgcttttggtgcatcaggcgctcctgcctttggggcatccagtacccctgccttt
ggggcatccagtacccctgcctttggggcatccagtactcctgcctttggggcatccagt
actcctacttttggtgcatcaaatacctcctccttcagttttggctcctccccagcgttt
ggccagtccacatcagcatttggcagcagcgcatttggctctacaccatctccctttgga
gcccaaggtgcgcaggcaacaaccccaacatttgggggttctggttttggtcaatcacct
ttcggtggtcaacagcaagggggcagtcgagccgtgccttatgcaccgacagttgaggca
gacacaggcagcggtactcagcctgctggaaagttggaatctatatctgccatgccggcc
tacaaagataaaagccatgaggagctgaggtgggaagactaccagcgaggagataaaggt
ggaccaaatccttctggccagtctcccggaaatgccggatttggtgtatcaactgctcag
ccaaatcctttttcttcatcaccgccgtttggtcagacatcagcaaatccaacaaaccct
ttttcgagcgcaacatctaccaacccttttgcccctcaaaccccaacaattgccagttcg
ggttttggagcagctacctcaaattttggttcatcgccctttggtgtaacatcttcatcc
aatctttttgggtcaacttcatcaaccgccacatcagttttcggttcatcctccgctttt
ggaacaacgacctcgtcaccgctatttggttcatcaagcactcctggattcggctcttct
tcatcaatctttggttcaaatcctggtcagggtgcaactccagcattcggcaacactcag
tcatctactctattcagctcaaacccctcgaccgggcagaccggttctgcatttgggcag
actggttctgcttttggacagttcggacagagtagcgctcctgcatttggccaaacaaac
attttcaataaaccttccactggatttggcaacatgttttcaagttcttcaacattaact
acgtcaagcagctctccttttggacaaacaatgcctgctggtatgacaccctttcaatca
gctcagccaggtcaagcatcaaatggttttggtttcaacaactttggtcaaacgcaagca
gctaatgcatctggaaatgctggtggactgggattttttggtcaaggcaacttcgggcaa
acgcctgctccgctgagctctgttgttttgcaaccggttgctgttacaaatccgtttgga
acacttcctgcgatgcctcagatttcaataaaccaaagtggaaactcaccttcgattcaa
tatggaatctccagcatgcctgttgttgacaagcctgctcctgtcagaatatcatctctc
cttacttcccgacaccttttacaaaggcgggtcaagttgccagcaagaaagtaccgtcct
ggcgacaatggtccaaaggttccttttttcactgatgacgaggagacctcaagtacacca
aaggcggatgctcttttcattccaagggagaaccccagagctctagttatacgtccaatt
caacagtggtcctctagggacaaatcaacaattccaaaagaccgcccgactgctccacta
catgacaatggtaagagtccagacatagctactgatgcagcaaaccatgacagaaatgat
aacggagaatctggttctgctggagaaagaactcatccatcagtcgatgcaaatcagaaa
tcaaacggcacaacacgcacagatcacgctaaagacaaagagcgcccctacagaacacta
ggaggacacagagccggagaagccgcaattgtttacgagcacggtgcagatatcgaggca
ctaatgccgaagctacgccaatccgattacttcacagagccacgaatccaggaactagcg
gctaaggaaagagcggatcctggttattgcaggcgggttagagactttgtggtgggaaga
cacggttatgggagcataaagttcatgggagagacagatgttcgtaggctagacttggaa
tcactggttcagttcaataaccgggaagtgattgtatacatggacgagagcaagaaaccg
gcggttgggcaaggtttgaataaaccggcggaggtgacattgctgaatataaaatgtgtg
gataggaagacggggaaacagtttactgaaggagagagagtggagaagtataagatgatg
cttaagaggaaagctgaggcacaaggagctgagtttgtgtcatttgatccagtgaaaggc
gagtggaagttccgggtcgatcattttagttcatataagctcggcgatgaagacgaagat
gaaggttag
DBGET
integrated database retrieval system
