Eutrema salsugineum (saltwater cress): EUTSA_v10006692mg
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Entry
EUTSA_v10006692mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EUTSA_v10006692mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10006692mg
Membrane trafficking [BR:
eus04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
EUTSA_v10006692mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
Clathrin
CNH
Motif
Other DBs
NCBI-GeneID:
18992665
NCBI-ProteinID:
XP_006416148
UniProt:
V4MRW8
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MAKSRAVVELTARFDLGGDDKIRALSLSPHSDSQTLVYVGTFSGSLLLLSIDTSTNIVAR
LGSVSLSASPVESVFVLGQERGKVLALCNGCLHLVDSLLSQPAKRLGGLLKGINVVARRV
RGRDSSSTDLLPSDVSADSSSSKKFLQMLGAGNRVSDIKGKDSRHERVHQGHYVFAVAIS
ERMLLIELQCDEKDGTSASFVVLKEVMGIGGIKTLVWLDDYVIAGTVKGYSLISCVTGQS
GVIFTLPDVSAPPLLKLLCKEWKVLLLVDNVGVVVDTNGQPIGGSLVFRRRPDSVGELSF
YLVTVGDGKMEIHQKKSGACVQSVSFGPEGCGPSFLAVDEAGDGNLLAVTTLSKLLFYRR
VPYEEQIKDLMRKKRYREAISLVEELDSEGEISKEMLSFLHAQIGYLLLFDLRFEEAVDQ
FLKSEKMEPSEVFPFIMRDPNRWSLLVPRNRYWGLHPPPAPFEDVVDNGLMAIQRAIFLR
KAGMDTPVDEEFLSNPPSRADLLESAIKNITRYLELSREKDLSHPVREGIDTLLMLLYRA
LNRTEDMENLASSDNNCVVEELETALNESGHLRTLAFLYASKGMSAKALAIWRLFTKNYS
SGLWQDSDDLVPYLHDNELIRLSGKEAAAAEAARILEEPCDTELTLQHLSWISDINPLFA
IQVLTSDKRTEELSPEKVIQAIDPKKVEIIQRYLQWLIEERDYNDPQLHTSYALSLAKST
LECVEVQNGIQEADSGGREAHDYNVGSISLFESDVRERLQTFLQSSDLYDPEEILDLIEG
SELWLEKAILYRRIGQETLVLQILALKLEDCAAAEQYCVEIGRPDAFMQKIILGYLICTW
ILKMVKGLCSRLLSVFSTTTGNHLILCKFWKNCLLTCP
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctcgggcagttgtggagcttactgcccgtttcgatctcggcggcgacgat
aagatccgagccctgtctctctcccctcactccgattcccaaaccctagtatacgtcggc
actttctccggatcccttcttctcctctccatcgacacttcaaccaatattgtcgcgcgt
ctcggaagtgtgtcgctgagcgcttctccagtggagtctgtcttcgtgctcggccaggaa
agagggaaagttctagcactctgtaatgggtgcttgcacttggtggattcgcttctatct
caacccgctaagagattgggtggtttattaaaagggatcaatgttgttgctaggagagtg
agaggacgcgactcgtcgagtactgacttattgccttccgatgtttcagctgattccagc
tcgagcaagaagtttcttcagatgcttggcgctgggaatcgggtgagtgacatcaaaggt
aaggattcccgacatgagcgagtccaccaaggtcattatgttttcgctgttgcaattagt
gagagaatgttgctgatcgaacttcaatgtgatgagaaagatgggacaagtgcttccttt
gttgtcttgaaagaggttatgggaattggtgggattaaaactttggtttggcttgatgat
tatgttattgcgggaaccgttaaagggtatagcttgatctcgtgcgttactggtcaaagt
ggggtgattttcacgttgcctgatgtgtctgctccgccactgctcaaattgctatgcaaa
gagtggaaggtgttgttgttggtggacaatgttggagttgttgtggacacaaatggtcag
cctattggagggagccttgtgtttcggaggaggcctgattctgttggagagttgtctttc
tatttggtgacggttggagatggaaagatggaaattcatcagaagaagtcgggtgcttgt
gttcagtcagttagttttggtcctgaagggtgcgggccttcatttttggccgtagatgag
gcaggagatggaaaccttttggctgttactaccttgtctaagcttcttttttaccggaga
gtgccttatgaagaacagattaaagaccttatgagaaaaaagagatatagagaagccatc
tccctggtggaggagcttgattcagagggggaaatttcgaaagaaatgctttcttttctt
catgctcagatagggtatctactactattcgatttgcgctttgaggaagcggtggatcag
tttttaaagtcagaaaaaatggaaccttctgaagttttcccttttatcatgcgggatcct
aatcggtggtctttgctggttccaagaaacaggtactggggactgcatcctccccctgct
ccattcgaagatgttgtagataatgggttgatggccatccagagagccatttttttaaga
aaagcggggatggacactccggttgacgaagagtttctctcaaatcctccaagtagagct
gatttattggagtcagcaattaaaaacatcaccaggtacctcgagctatcacgtgagaag
gacttaagtcacccagtaagagaaggaatagacacgcttctaatgcttctgtacagagct
ttaaaccgtactgaagatatggagaatcttgcatcttctgataataactgcgtcgtggag
gagttggagactgctttaaatgaatctggacatttacggacactggcattcctctatgca
agtaaggggatgagtgcaaaggctcttgctatttggcgtctctttacaaagaattattca
tctggtctatggcaagactcagatgacttggtgccctatttacacgacaacgagctcatt
aggttatcaggtaaagaagctgctgccgcagaagcagccagaattcttgaggaaccctgt
gatacagaactgacattgcagcatcttagttggatttcagatataaacccattgtttgcg
atccaagtcttgacgtctgataaaaggacagaagagctttcgccagagaaagtaattcaa
gctattgatcccaaaaaggtggaaatcatacagaggtacctccaatggttgattgaagaa
agagactacaatgatccgcaactgcatacatcctatgctctctcacttgccaaatcaaca
cttgaatgtgttgaagttcaaaatggtatccaagaagctgattctggaggcagagaggca
cacgattataatgttggaagtatttctttgtttgaaagtgatgtacgggaaagattgcag
acttttttgcaatcttcagacctatatgatcctgaagaaatcttggatttgattgaagga
tcagaactgtggttggaaaaggcaatcctataccgaaggatagggcaggagacattggtc
ctccaaattctagcactgaagcttgaggattgtgcagctgcagagcaatattgtgtagag
attggaagaccagatgcatttatgcaaaaaattatcttaggttacttgatatgtacctgg
atcctcaaaatggtaaagggcctatgttcaaggctgctgtccgtcttctccacaaccacg
gggaatcacttgatcctttgcaagttttggaaaaattgtctcctgacatgcccttaa
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