Eutrema salsugineum (saltwater cress): EUTSA_v10006708mg
Help
Entry
EUTSA_v10006708mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12236
transcriptional repressor NF-X1
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eus03000
]
EUTSA_v10006708mg
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10006708mg
Transcription factors [BR:
eus03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
EUTSA_v10006708mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
EUTSA_v10006708mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
18993858
NCBI-ProteinID:
XP_006417489
UniProt:
V4L0K7
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MICYDKVGRSANIWSCSSCFSIFHMHCIKKWARAPTSIDLLAEKNQGDNWRCPGCQSVQL
TSSNEICYRCFCGKRKDPPSDPYLTPHSCGEPCGKPLEKEFAAAETTKEDLCPHVCVLQC
HPGPCPPCKAFAPPRGCPCGKKMITTRCSERRSVLVCGQPCDKLLNCARHRCERACHVGP
CDPCHVLVNATCFCKKKVETVICGDMNLKGELKAEDGVYSCSFNCGKPLGCGNHFCSEVC
HPGPCGDCDLLPSRVKTCYCGKTRLEEQIRRSCLDPIPSCSNMCRKLLPCGLHTCNEVCH
AGDCPPCLVQVNQKCRCGSTSRTVECYVTTSLKTDEFVCAKPCGRKKNCGRHRCSERCCP
HLNAKKNDLSGDWDPHVCQLPCEKKLRCGQHSCESLCHSGHCPPCLEMIFTDLTCACGRT
SIPPPLPCGTPVPSCQLTCSIPQPCGHSATHGCHFGDCPPCSAPVEKKCVGDHVVLRNIP
CGLKDIRCNKVCGKTRRCGMHACARTCHSEPCDSYNESEAGLRATCGQTCGAPRRDCRHT
CAALCHPSEPCPDSRCEFPVTITCSCGRITSTVPCDAGGKSAYDLRVDSIYEASVLQKLP
TPLQPVEPSENRIPLGQRKLSCDDECAKLERKRVLQDAFDITPPNLDSLHFSENSAMTEI
ISDIYRRDPKWVLAVEERFKFLVLGKARGNTSALKLHVFCPMQKEKRDTVRLLAERWKLA
VSNAGWEPKRFTVVHVTSKSKPPTRIIGARAGAVSVGGPHPPSYDPLVDMDPGLVVSLLD
LPREANISALVLRFGGECELVWLNDKNALAVFHDHARAATAMRRLDHGSVYHGAVVIQNS
TSPSLSNAWGKLPSSSSGNPWKKAVIQESDESWGAEDSPIGGSSTDIKASAWRSATSNTP
IATSVNRWSVLEPEKPNTSALEPLTQIEESSSSKAACKQPVEGSSEEVVDDWEEVCD
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgatttgctatgacaaggttgggcggtctgcgaatatatggtcctgctccagctgtttc
tccattttccatatgcactgtatcaagaaatgggctcgagcaccaacatcgattgatttg
ttggctgagaaaaatcaaggtgataattggagatgtccaggttgccagtctgtacagttg
acgtcgtctaacgagatttgctatcggtgtttctgtgggaagagaaaagatccaccttct
gatccatatctgacaccacactcatgcggggagccatgtgggaagccgttggagaaagag
tttgcagcagctgagacgactaaagaggatctttgtcctcatgtctgtgttttgcagtgt
catcccggtccatgtcctccttgtaaggcgtttgctccacctcgtggttgtccatgtggt
aagaagatgattactactagatgctctgagcggagatctgttcttgtttgtggtcagcct
tgtgataagcttctcaactgtgcgcgtcatcgatgtgaaagggcatgtcacgttggtcct
tgtgatccttgtcatgtactggtaaatgccacatgtttctgcaagaagaaagtggagact
gtcatttgcggagatatgaatttgaagggagagttgaaagcagaagatggtgtgtattcg
tgtagttttaactgtgggaagccgcttggatgtggtaatcatttctgttctgaggtttgc
catcctggaccttgcggggactgtgacttacttcccagtagagttaagacgtgctattgt
gggaaaacgcgattagaagaacagatcaggcggagttgcttggacccaattccttcttgt
tcaaatatgtgcaggaagcttcttccttgtgggttacatacttgcaacgaggtgtgccat
gcgggagattgtcctccttgtttggtccaagtcaaccagaaatgccggtgtgggtcaaca
tcaaggactgtggaatgctacgtaacaacttctctaaagacggacgagtttgtgtgcgca
aagccatgtgggcgtaagaagaactgtggaaggcatagatgcagcgagcgttgctgccct
catttgaacgctaagaagaatgatctgtctggcgattgggacccgcacgtttgccagtta
ccttgcgagaagaagctaaggtgcgggcagcattcctgtgaatctttatgtcacagtggc
cattgccctccttgtctcgagatgattttcactgatcttacatgcgcatgtggaagaacc
tcgattcctccaccactaccatgtggaacacctgtacctagctgccagcttacatgctcg
attcctcagccttgtggccattctgctactcatggatgtcattttggggattgccctcct
tgttctgcacccgtggaaaagaaatgcgtcggtgatcatgtggttctcagaaacatacct
tgtgggttgaaagacattagatgtaacaaggtttgtggaaagacaaggcgttgtggcatg
catgcttgtgccagaacttgtcactcggagccctgtgacagttacaatgaatctgaagca
ggtctgcgtgctacatgtggacagacgtgcggtgctcctagaagagattgcaggcacaca
tgtgcagcactctgccatccttccgagccttgcccagactcaagatgtgaatttccagtc
acaattacatgttcgtgtggtcgcattacctctacagtcccttgtgatgctggaggaaag
agcgcctacgatcttcgtgttgattctatctatgaagcctctgttttgcagaagcttcct
acgcctcttcagcctgttgagccgagtgaaaaccgaatccctctcgggcagagaaagctt
tcgtgtgatgatgagtgtgctaagttggagcgtaagcgggttcttcaggatgcgtttgat
atcactcccccaaatctggactctttacatttcagcgagaattctgctatgacagagatt
atttcagacatctataggcgtgatccgaagtgggtactggctgttgaagagcgcttcaag
ttcctggtacttgggaaagctagaggaaacacaagtgccctcaagctccacgttttctgt
ccgatgcagaaggagaaacgagacacagttcggcttctagctgagaggtggaaacttgcg
gttagcaacgccgggtgggagccaaaacggttcacagtggtccacgtaacatcaaagtcg
aaaccgccaacacggatcattggagctagggctggtgctgtctctgtaggcgggccccat
ccaccgtcctatgatccgctggtggatatggatcctggtcttgtggtttctttactggat
ctcccgagggaggcgaatatcagcgccttggtgctgagatttgggggtgaatgtgagctt
gtttggctgaatgacaagaacgctttagccgtgttccatgaccatgcccgagccgccact
gccatgaggaggctggaccacggttctgtctaccatggagccgtggttatccaaaacagc
acgtctccatcactcagtaatgcatggggaaaattacccagcagctcatcagggaatcca
tggaagaaagcagtgatccaggagagtgatgagtcctggggagctgaagattctcctatt
ggaggatcatctacagatattaaagcctctgcgtggagatcagcaacgagcaacactccg
atcgctacctcggttaaccgctggagtgtgctggaaccggagaagcccaacacgtccgct
ttggagccattgactcagatagaagagagcagcagctcaaaagctgcctgtaaacaaccg
gtggaaggctccagcgaagaagtggtggatgattgggaggaggtatgcgactga
DBGET
integrated database retrieval system
