Eutrema salsugineum (saltwater cress): EUTSA_v10006758mg
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Entry
EUTSA_v10006758mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10006758mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
EUTSA_v10006758mg
TFIIIC, fungi type
EUTSA_v10006758mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_14
TPR_20
TPR_2
TPR_10
TPR_CcmH_CycH
TPR_1
ARM_TT21_5th
TPR_16
ARM_TT21_2nd
DUF7017
RIG-I_C
TPR_12
SNAP
TPR_11
Motif
Other DBs
NCBI-GeneID:
18993130
NCBI-ProteinID:
XP_006416677
UniProt:
V4KBH3
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MEDKGKGVVGEDEENLVSELERGQINMEEDAGDGSDDNYDDEDVNSDEEDQGGDDDDEGD
ELEEGEAASEIPNIFQRVDYEALAEKRRKEHADSQRDGSEKRATYTNNTSGLEGIMEFLS
SGRRRKSRKQKKRGRRQGSKKEVSPEILKRFREALYLHANGRDIEALPILVEVIKQAPTF
DTAYYYLSRVSEHLGKTESSSTEALKIAANIKGPKSPFWKLLYERFKEQEDLLSARSYAS
KAIQADPDDIPLKYEYADLCLNAEKYKDAAETYEQIFRRYPERIEALKWGIEYFLKSGEG
ERAASILEDHIKSHSSEVGPDVLDLLASVFMQINAYDRALKYIHDVRQIYNPGKELSSSL
KIRQAICHVRLKEMEQAEIVLSILPREAVSEHPELITNLADELTNIGNFHSALKYYLLAI
SEPVNNGYLFVKVARSYMSLAKREQAIVFYYKALNELSDPVDARITLASLLLEDGKRDEA
VLVLSPPEDPDLDTAKQKAWWKNRKIRMNLCQIYYSEGMHEDFANTALQLVLKWVWRRTV
KGKRKRSVLSELQSNKRRRRPRDAEASELRGGPKKLRKIRQTLNETRRIRERAAIKAHNE
DICSESEEEIIKDEEYHRLFVDLCKALASLQRYWEALEIVNLARRLDAKMLPVEKKKELQ
SLGAKISCDTMDPKQWFDCVRSVIQQHPYRLNAWNCYYKVISRLGKRASTEAKFMHHLRS
KYRDCVPPILIAGHHFTVTSRHQDAAREYLEAYKLMPDSPLINLCVGAALINLALGFRLK
NRHECLAQGFAFLYNNLRICSNSQEALYNVARAYQHVGLVTLAASYYEKVLAVYEKEYQM
PKLPNEDPNVAEERKPVNCDLRKEAAHNLHLIYKHSGAFDLARQVLKDHCTF
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggaagataagggaaagggtgtggtgggagaagatgaggaaaacttggtttctgagcta
gaaaggggtcaaatcaatatggaagaagatgctggtgatggtagtgatgacaactatgac
gatgaggacgtaaacagtgatgaagaagaccagggaggtgatgatgatgatgagggagat
gagttagaagaaggagaagctgcaagtgaaattccaaacatattccaacgcgttgattat
gaagctctggctgagaagagacgcaaagaacatgctgattctcaacgtgatggatcagag
aagagagccacgtatacgaataacacctcgggcctggaaggaatcatggaattcttgtct
tctggtcgccgacgaaagtctcggaagcagaaaaaaaggggtagaagacagggctcaaag
aaagaagtctcacctgagattcttaagaggtttagggaggctctttatcttcacgcaaat
ggccgtgacattgaggctttacctattttagtagaagttattaagcaagcaccaaccttc
gatacagcatattattacctttcacgtgtatctgagcatcttggtaagaccgaatcatcg
tcgactgaagcattgaagattgctgcaaatatcaaaggtccaaaatcacctttttggaag
ttgctttatgagagattcaaggaacaagaagacttattgtcagcgaggagttatgcgtcc
aaagcaatacaagctgatccagatgatatccctttgaaatatgaatatgcagacctctgc
ctaaatgctgaaaaatataaagacgctgctgaaacctatgagcaaatatttcgtcggtat
cctgagagaattgaagcgctcaaatgggggatcgagtatttcctaaaatccggtgagggt
gaacgagcagcaagcatcttagaggatcatatcaaatcccattcatcagaagtggggcca
gatgtcttggatttactggcttctgttttcatgcaaattaatgcgtatgatagagctctt
aagtatattcatgacgtgcgccagatttacaatccaggaaaagaactgtcttctagcttg
aagatcagacaagccatctgtcatgttcgccttaaagaaatggagcaggcagagattgtg
ttaagtattctaccacgggaggctgtatctgaacatccagagctcattaccaatttggct
gatgagctaacaaacattgggaattttcactctgctctcaaatactatttattagcaatc
agtgaacctgtgaataatggctatttgtttgtgaaagttgctcgctcttatatgtcattg
gcaaaacgagaacaggccattgttttctattataaagctttgaatgaactcagtgatccg
gttgatgcgcgcataactctggcttcacttctcctggaagatggcaaacgagatgaagct
gtattagtgctttctcctccggaagatccagatctggatactgctaaacagaaggcatgg
tggaagaacagaaagatcaggatgaatctttgtcagatctattattcagaggggatgcat
gaggactttgccaacacagcactgcagttggttcttaagtgggtttggcggcggacggta
aaggggaaaagaaaacgatcggttctttcggagcttcaaagcaataaaagacgccgacgt
cctagagatgctgaagcttccgagttgagaggtggaccaaaaaagctgcgcaaaatcagg
caaacattaaatgaaacaagaagaatcagagaacgggctgctattaaagctcataacgaa
gatatctgcagtgaatctgaggaagaaattatcaaggatgaagagtatcaccgcctcttt
gtggatttgtgcaaggcattggcatccctgcaaagatattgggaagctctggagatagtt
aatctggcacgtagattggacgccaaaatgctgcctgttgagaaaaaaaaggagcttcag
tcacttggagctaaaatatcgtgcgatactatggatccaaagcagtggtttgactgtgta
agatctgtcattcagcaacatccatatcgtttgaatgcctggaactgctattacaaagta
atttcaagactagggaaaagagcatcgactgaagctaagttcatgcatcacttacgaagc
aagtacagagattgcgtaccgcctattctgattgctggtcatcatttcaccgtgacaagc
cgacatcaagatgctgcaagagaatacctcgaagcatataaactaatgcccgatagccct
ttaattaacctctgcgtaggagctgctttaatcaacttagccctcggttttcgacttaag
aaccggcatgagtgtcttgctcaaggctttgcatttctatacaacaatctcagaatctgc
agtaacagtcaagaagcgttgtataacgttgcgcgggcgtatcagcacgtaggacttgtg
actcttgcggcttcatactacgagaaggttttagcggtttacgagaaggaatatcagatg
ccgaaactccctaacgaagatccaaatgttgcggaagagcgtaaacctgttaactgtgac
ctacgcaaagaagctgcacacaatctgcatttgatctataagcacagtggagcgtttgat
ctcgcaaggcaggtcttaaaggaccactgcactttctga
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