Eutrema salsugineum (saltwater cress): EUTSA_v10006789mg
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Entry
EUTSA_v10006789mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10006789mg
Spliceosome [BR:
eus03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
EUTSA_v10006789mg
Other components
Complex C specific factors
EUTSA_v10006789mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
18993188
NCBI-ProteinID:
XP_006416746
UniProt:
V4KUW0
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MDEYQEMERFSMENDYEGGRWENGEFLYEKRKEKRKQTKNDATYGIFAESDSDSDGSSGG
GRRKRRKDRDSGRKADLTKPVNFVSTGKVMPTQEIDRDSREHNDERGSVKIDDRNMSDED
CVVRGGLGSGRSGLGSGINASIYNEEDNLLPGALGKKIAEGAKRRGKAKMDKRGEEGGAK
AGKKKTLGGDIGQFEKSTKGIGMKLLEKMGYKGRGLGKNQQGIVAPIEAQLRPKNTGLGY
NDFKEAKLPDLTKVEEKKTVAVSMSENDQNHGDRGRRNLWKKKKVRKEVYVTAEELLEKK
QEEGFGGGQTIIDMRGPQARVVTNLENLNGEEKAREADVPMPELQHNLRLIVDLVEHEIQ
KIDRDLRNEKESALSLQQEKEMLIKEEEKQKTHLENMEYIADEISRIELENTSGSLTLDS
LANRFEDLQTSYPDDYKLCNLSTIACSLALPLFIRMFQGWDPLRDAVHGLKAISSWRKLL
EVEDNQNIWVVSTPYSQLVSEVVLPAVRIAGVNTWEPRDPEPMLRFLETWENLLPSSVLH
TILDTVVLPKLSTAVEYWDPRRELVAIHVWVHPWLPILGQKLEFLYQIIQMKLSNVLDAW
HPSDPSAYTILSPWKTVFDATSWEQLMRRYIVPKLQLALQEFQINPANQNLDRFNWVMKW
ASAVPIHLIADLMERFFFPKWLDVLYHWLRSKPRFDEIQEWYYGWKGLFPQELSANERIR
IQLKRGLDMLMEAVEGVEVSQPRARAQEQRHFEPAQAQAKAHMDSAEVLSLKEVLEVFAQ
ENELLFKPKPNRMHNGLQIYGFGNVSVIIDSLNQKLLAQKDGGWFLVTPDDLLRMHNNAT
VSGKR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatcaagagatggagagattcagcatggaaaacgactatgaaggaggtcga
tgggagaacggcgagttcttatacgaaaagaggaaggagaagcggaaacaaaccaaaaac
gatgctacttatggaatcttcgctgagagcgattcggattccgatggttctagcggcgga
ggtcggaggaagaggcgtaaggatcgggattcgggaaggaaagccgacttaaccaagcct
gtcaattttgtttctacaggtaaggttatgccgactcaagagattgatagggattctaga
gaacataatgatgagagaggtagtgttaaaatcgatgaccgtaacatgagtgatgaggac
tgtgtagttagaggtggattgggtagtggaaggtcaggtttagggtcagggattaatgcg
tctatttataacgaggaggacaacctcttacccggagctttggggaagaagatagctgag
ggggcaaagaggagagggaaggccaagatggataagagaggtgaagagggtggtgcaaag
gcaggtaagaaaaaaactttaggtggtgatattggtcagtttgagaaatctactaaagga
attggtatgaagctgcttgaaaagatggggtacaagggacgtgggcttgggaagaaccag
caaggtattgtagctcccattgaagcacagttgaggccgaagaatacgggtctagggtac
aacgatttcaaggaggcgaagttgcctgatttaacaaaggtagaggagaagaagactgtt
gcggtcagtatgagtgagaatgatcagaatcatggtgatagaggacggagaaatctttgg
aagaagaagaaagtgaggaaagaagtttatgtcactgcggaagaattattggaaaagaag
caggaagagggctttggtggtgggcagaccattattgatatgcgaggaccacaggctcgg
gttgtgacaaatttggaaaatctgaatggagaggaaaaagcaagggaagcagatgttcca
atgccggagttacaacacaacttgcgactgattgttgatctagtcgaacacgaaattcag
aagattgatagagacttgaggaacgagaaagaatcagctttaagcttgcaacaggagaag
gagatgcttataaaggaggaagagaaacaaaaaacacacttggaaaacatggaatatatc
gcagatgaaataagtcgaatcgagctggagaatacgtctgggagtttgacactggattca
cttgctaatcgtttcgaggacctgcaaacaagctatcctgatgattataagctttgtaac
ttgtccaccattgcttgctcactggccttgcctctctttatcaggatgtttcagggttgg
gatcctctcagggatgcagttcatggtctgaaggctatatcttcttggagaaagcttttg
gaagtcgaggataatcaaaatatctgggtagtctcaacgccttatagccaactagtctcg
gaggtagtgttacctgctgtccgtatagcaggcgtcaatacctgggaacctagagaccct
gagccgatgcttagatttttagagacgtgggaaaatttgctgccttcatctgtcttgcat
acgattttagacacagtagtgctgccaaaactttcaactgctgttgaatattgggaccca
cgaagggaacttgttgccatccatgtttgggtgcatccttggttgccaatacttggtcag
aagttggagtttctgtatcagatcattcagatgaagttgagtaatgttcttgatgcttgg
catcctagtgacccgtctgcctacactattctctctccatggaagaccgtttttgatgct
acaagctgggagcaacttatgcgacgttacatagttcccaaacttcagctggccttgcaa
gagtttcagataaacccggcaaaccagaatttagaccggttcaattgggttatgaagtgg
gcatctgcagtaccgatacacctaattgctgatttgatggagaggttcttcttccccaaa
tggctggatgtgttgtaccactggttgcgttcgaaaccgaggttcgacgagatccaggaa
tggtattatggttggaaagggttattcccgcaagagctttcagcaaacgagaggatcaga
atccagttgaagcgtggtttagatatgttgatggaagctgttgaaggagttgaagtgtct
cagccaagagcaagggcacaagaacagagacacttcgaacctgctcaggctcaggccaag
gctcatatggatagcgcagaggtgctgagtttgaaagaagtcttggaagtatttgcgcaa
gagaatgagttgctgttcaaacctaaaccgaatagaatgcacaatggtcttcagatttat
gggtttgggaatgtgagtgtgattatagactcattgaaccagaagctgttggctcagaaa
gatggaggctggttccttgtaactcctgatgacttattgaggatgcacaacaatgcaact
gtttctggaaaacgatag
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