KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10006800mg
Entry
EUTSA_v10006800mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10006800mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10006800mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10006800mg
Spliceosome [BR:eus03041]
 Complex B
  Other components
   Prp19 complex
    EUTSA_v10006800mg
 Complex C
   Prp19-CDC5 complex
    EUTSA_v10006800mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    EUTSA_v10006800mg
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 18993902
NCBI-ProteinID: XP_006417538
UniProt: V4MUY6
LinkDB
Position
Unknown
AA seq 833 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLLPTQWRTIAPIVGRTPSQCLERYEKLLDAACTKDENYEAADDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDGRHRKRKRKGIDYNAEIPFEKRAPAGFYDTADEDRPADQVKFPT
TIEELEGKRRADVEAQLRKQDVARNKIAQRQDAPAAILQANKLNDPEVVRKRSKLMLPPP
QISDHELEEIVKMGYASDLLAENEELTEGSAATRALLANYSQTPRQGMTPMRTPQRTPAG
KGDAIMMEAENLARLRDSQTPLLGGENPELHPSDFTGVTPRKKEIQTPNPMLTPSMTPGG
AGLTPRIGLTPSRDGSSFAMTPKGTPFRDELHINEDMDMHENAKLERQRREEARRSLRSG
LTGLPQAKNEYQIVAQPPPEDSEEPEEKIEEDMSDRIAREKAEEEARHQALLRKRSKVLQ
RDLPRPPAASLELIRNSLLSASGDKSSVVPPTPIEVADEMVRREFLQLLEHDNAKYPLDE
KAEKKKGAKNRANSSGSHVIAIEDFDENELQEADKMVKEEGQFLCVSMGHENESLDDFVE
AHNTCVNDLMYFPTRNAYGLSSVAVNAEKVAALQVEMENARKKMEEDEKKAEHMKAKYKT
YTKGHERRAETVWSQIEASLKQIEIGGTEVECFKALKRQEEMAASFRKKNLEEEVVKQKE
TERKLQARYGNLLSTLEKAEEIMVGFRAEALKQGAKLATAEEEDASIAMEASA
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgaggattatgattaagggaggtgtgtggaagaacaccgaagatgagatcctcaaggcc
gccgtgatgaagtatggtaagaaccagtgggctcggatctcgtctcttctcgttcgaaag
tcggccaaacagtgcaaagctcgctggtacgagtggctcgatccttctatcaaaaagact
gaatggaccagagaagaagatgagaagcttctacatcttgcaaaacttctgcctactcag
tggagaactattgctcctattgtgggtcgtactccatcacaatgccttgagaggtatgaa
aagcttcttgatgcagcatgcactaaggacgagaattatgaagcagcggatgatccacgg
aaattacgtcctggtgagattgatcccaacccggaatcaaagcctgctcgtcctgatcca
gtggacatggacgaagatgagaaagagatgctttctgaagcgagagctagattggctaat
actaggggaaagaaggctaaaagaaaagctagagaaaaacaacttgaggaagctagaagg
cttgcttctctgcaaaagagaagagaattaaaagcggctggaattgatggaaggcatagg
aaaaggaagcgaaagggaatcgactataatgcagaaattccttttgaaaagagggcacct
gcgggattttatgacactgcagatgaagatcgtcctgctgaccaagtaaaatttccaact
accattgaagaacttgaaggaaaaagaagggctgatgtggaagcacagttacgcaaacaa
gatgttgcaaggaacaaaattgctcagagacaggatgctccagcagctatattgcaagcg
aacaagctgaatgatcctgaagttgttaggaagaggtcaaagctaatgttaccaccacct
cagatatcagaccacgagctagaggaaattgtgaagatgggttacgccagtgaccttctt
gcggagaatgaggagctaacagaaggcagtgctgctactcgtgcgcttttggcaaattac
tcacaaacaccaaggcaaggaatgacccccatgaggacaccacaaagaactcctgctggt
aaaggtgatgctattatgatggaagcagaaaacctggctcgattaagagactctcagaca
cctttgctaggaggagaaaatcctgagttgcacccttctgacttcactggtgtcactccg
aggaagaaggagattcaaacgcctaatccgatgttgaccccttcgatgactcctggtggt
gctggccttactcccagaattggcttgacgccgtcaagggatgggtcttcttttgctatg
acacccaaaggcactcccttcagggatgaacttcacataaatgaagacatggacatgcac
gaaaatgcaaaacttgagaggcagagacgagaggaagctagaaggagcttacgctctggt
ctgactgggcttcctcaggcaaagaacgaataccaaatagttgcacaacctcctccagag
gacagtgaagagccagaagagaaaattgaggaagacatgtcagacaggatagctagggaa
aaggctgaggaggaagcaagacaccaggcgctgcttaggaaaaggtccaaggttttgcag
agagatcttcctagacctccagcagcttcgttggaactaattaggaattccttgctctca
gccagcggagacaaaagttctgttgttcctcctactccaattgaggttgcagatgaaatg
gtaagaagggagtttctacagttgctggagcatgataatgcaaagtatcctcttgatgag
aaagctgagaaaaagaaaggagccaagaaccgtgccaacagctctggttctcatgttatt
gcaatcgaagactttgacgaaaatgaactccaagaggctgacaaaatggtaaaggaagaa
gggcagtttctttgcgtgtcaatgggacacgagaacgagtcacttgatgattttgtagaa
gctcacaacacatgcgtgaacgatctcatgtacttccccactcgaaacgcttatgggctc
tcaagtgttgctgtgaacgcagagaaagttgcagctttgcaagtggagatggagaatgcg
aggaaaaagatggaggaggatgagaagaaggcagaacacatgaaggctaagtataaaact
tatacgaagggtcatgagagaagggcagagactgtgtggagccaaatagaggcgagtttg
aagcagattgagattggtggaacagaagtagagtgctttaaagcattgaagaggcaagaa
gagatggctgcatctttccggaagaagaatttggaggaagaagtggtgaagcaaaaggag
acggagagaaaactgcaagcgcgctatgggaatctgttgtcgacgcttgagaaagcagag
gagataatggttgggttcagagccgaagcattgaaacaaggggccaagctagccactgca
gaagaagaggacgcttccatagccatggaagcttctgcttaa

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