Eutrema salsugineum (saltwater cress): EUTSA_v10006819mg
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Entry
EUTSA_v10006819mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EUTSA_v10006819mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10006819mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10006819mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
EUTSA_v10006819mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
EUTSA_v10006819mg
PBAF complex
EUTSA_v10006819mg
GBAF(ncBAF) complex
EUTSA_v10006819mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DUF7685
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
18992774
NCBI-ProteinID:
XP_006416273
UniProt:
V4MS54
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MPASEDRRGKWKRRKRGGLLARKPKQEEEDMEEDEEENNNNNNDEMEDVDNADELQQNGG
ATPDPGPGNGEVVEDSGARISDFPSVVRRVVIRPHASVTALVAAERAGLIGETRGQGSLP
ALENISFGQLQALSTVPADHPSLDIETSDGSSSAYVISPPPIMEGEGVVKRFGDLVHVLP
MHSDWFAPNTVDRLERQVVPRFFSGKSPNRTPESYMEFRNAIVSKYLDNPEKTLAISDCQ
GLVYGVDFEDFARVFRFLDHWGIINYCATVEGHPGPSRDVLDVREDTNGEIHVPSAALTS
IDSLIKFDKPNCRHKAAEVYSSLSCSDGDLPDLDIRIREHLCESHCNHCSRPLPTVYFQS
QKKGDILLCSDCFHHARFVVGHSCVDFVRVDKTKDYGDQDGDSWTDQETLLLLEAVELYN
ENWVQIAEHVGSKSKAQCILHFLRLPVEDGLLDSFEVTDVTNSANPTNGYDHKGRDSNGT
IPDSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCALESLAVLSEDDRMKSDGLQGK
EPSLVDGENQQLDENSGVHKTACQNGAEPQTPLPQDKVMAAFRAGLSAAATKAKLFADHE
EREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFAAERARMLSARFG
SAGGISPQTNNNNNNLQGMSLSTGGNNINSLLQQQQQQQQVSACTSQPSIIPGFSNNPQV
HAQMQFMARQQQQQQQQQQQQAFSFGPRLPLNAIQTNAGSTASPNVMFGNSQLNNPAGAA
ASMNQPSFSHPMVRSTTGSGSGSGLGLN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctgaagataggagggggaaatggaaacggcggaagcgaggtggtttattg
gcgaggaagccgaagcaagaggaggaagatatggaggaagacgaggaggagaacaacaac
aacaacaacgacgaaatggaggacgttgataatgccgatgagcttcagcaaaacggcggc
gcaactccggatccgggacccggtaatggcgaggtagtggaagattccggtgcgcgcatc
tctgacttcccctccgtggtcagacgcgtggtgatccggccacacgcgtctgtaacggcg
cttgtggcggctgagagagctggtttgataggggagactagagggcaaggctcgcttcca
gctctggagaatatttcgtttgggcaattgcaggcgttatctactgtaccggctgatcat
ccgtcccttgatattgagacaagtgatggatcgtcttcggcttatgttatctctccacca
cctattatggaaggagaaggagttgttaaacggtttggggatctcgttcatgtcttgcct
atgcattcagattggtttgcaccaaacacagtggatcggcttgaaaggcaagtggtgccc
cgattcttctctggaaaatcgccaaatcgtacacctgaaagttatatggaattcaggaac
gccatcgtttcaaaatacttggataaccctgaaaagacactggcgatttctgattgccaa
ggattggtatatggtgttgactttgaagatttcgcacgagttttccgttttcttgatcac
tggggaataattaattactgtgccactgtcgaaggtcatcctgggccttctagggatgta
ttagatgttagggaggatacaaatggtgagatccatgtaccatctgctgctttaacatct
attgatagtttgatcaaatttgacaagcccaactgtagacacaaggcagccgaagtctat
tcatccttgtcatgttcggatggtgacctccctgacttggacatcaggattcgtgaacac
ctatgcgaaagccattgcaaccattgttctcgaccgcttccaactgtgtacttccaatcg
caaaagaagggggatatactcttatgctctgattgttttcaccatgcaagatttgttgtt
ggacattcttgtgttgactttgtaagagtggataaaaccaaagattatggcgatcaagat
ggtgacagttggactgatcaggaaactctcttgcttcttgaagctgtggaactctacaat
gaaaactgggttcagattgcggagcatgttggttccaaatcaaaagctcaatgcattctt
cattttcttcgattacctgtggaggatggtcttttggatagttttgaggttacagatgta
actaattcggcaaaccctacaaatggatatgaccacaaaggaagagattcaaatgggact
ataccagattctgacactgaaatcaagcttccttttgtgaagtctccgaatccggttatg
gcattggttgcatttttggcatcagctgttggacctcgagttgctgcgtcctgtgccctt
gagtccctcgcggtattatctgaggatgataggatgaaatctgacggcttgcaaggaaaa
gaacctagcttggttgatggagaaaatcagcagctagatgaaaactcgggagtacataaa
acggcatgccaaaacggagcagaacctcagactccattgccacaggataaggttatggca
gcatttagggctggtctatcagctgcagctacaaaagcaaaactgtttgcggatcatgag
gaacgcgagatccaaaggctttctgcaaatatcgtaaatcaccagctgaaaaggatggag
ctgaagctaaagcagtttgcagagatagaaacattgttgatgaaagaatgcgaacaagta
gagaaaacccgtcagagatttgctgcagaaagagcacgaatgctctcagcaagattcgga
tcagctggaggaatctctccacagactaataataataataataatctccaaggcatgtct
ctatccacgggtggtaacaacatcaattctcttctgcagcagcagcagcagcaacagcaa
gtctcagcttgcacttctcaaccaagcatcatcccgggattcagcaacaacccacaagtt
catgcgcagatgcagttcatggcacgccaacagcaacagcaacaacaacaacaacaacaa
caagcgttctcatttggcccgagattgcctctcaatgcgatacagacgaatgcaggatca
acggcttcaccaaatgtcatgtttggcaacagccaacttaataaccctgcaggtgcagca
gcatccatgaaccagccttcgtttagtcacccgatggttaggtctaccacgggttctggc
tccgggtctggcttaggcttaaactaa
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integrated database retrieval system
