Eutrema salsugineum (saltwater cress): EUTSA_v10006834mg
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Entry
EUTSA_v10006834mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10006834mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10006834mg
Spliceosome [BR:
eus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
EUTSA_v10006834mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
18992263
NCBI-ProteinID:
XP_006415703
UniProt:
V4MQT1
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MDKERYSRSNRDDRDRDSSVDHSPEREGGRRHHGRDRDGDSKRRDSDHHRSSRRDDREDE
RDRTKDRARDRGRSVERSEREGSRDREKHHERSHEVSKEKEARSKRKEREEENGSREGKK
KSRFSDGNGERRSRFEDSAMEHENKNAEVTEGSGAMNGTSGVPIGAASYASETSLAPSQT
LLTKVSSISTTDENKGVSIVRSHEVPGKSSTDGRTSSTAGKSSAKLSLDALAKAKKTLQM
QKGLVQLQKGLAERMKNSPLPKQGTNSTSEGSTHTRGPSSTTTPAVSAGTSSASALPHAV
FPGLDSIATIEAVKRAQERAVNMGGRLDPGFGPLINLFPGQTHAQTPVPQKPAKPPVLRV
DALGREIDEHGNVISVTKPSNLSTLKVNINKQKKDAFQILKPQLEVDPEENPHFDPRMGI
DKNKILRPKRMSFQFVEEGKWTRDAENLKLKSQFGEAKARELKVKQAHLAKAKDDINPNL
IEVSERAPRKEKPKEPIPDVEWWDANVLIKGEYGDIADGAITDSDLKIEKLTHYIEHPRP
IEPPAEAAPPPPQPLKLTKREQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMK
VLGAEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETI
VSVYKINKLSHPKARFKVEMNARQNKLTGCSVMTDGMSVVVVEGKSKAIKRYGKLMLSRI
NWEEAVKKEGEEGEEEDEDGEENGGNNKCWLVWQGSVAKPSFHRFHVQECLTESAAKKVF
TDAGVAHYWDLALNYTED
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggataaggagagatactccaggagcaaccgggacgatcgtgatcgggattcgagtgtg
gatcattctccggaacgtgaaggcggacgccggcatcatggtcgtgatcgcgatggcgat
tcgaagcgtcgtgattcagatcaccaccggtcatcgaggcgcgacgatagggaggatgag
agagataggactaaggatagagctcgggacagggggagatctgttgagcgaagcgagagg
gaagggagtagagatagggaaaagcatcatgagaggtctcacgaggtaagtaaggagaag
gaagcgaggagcaagaggaaagagagagaggaagagaatgggagtagagaggggaagaag
aaatctaggttttctgacgggaatggtgagaggaggagcaggtttgaggattcggctatg
gaacatgagaacaaaaatgctgaagtaactgagggttctggggccatgaacggaaccagt
ggcgtcccgattggcgctgcttcatatgcatcggaaacttctttggcccctagtcaaacc
ctgctcactaaggtatcttcgatatctacaacggatgaaaataagggagttagtattgtc
aggtctcatgaggttcctggaaaatctagtacagatggaagaacatcctcaacggctggg
aaaagtagtgcaaagttgtcccttgatgcactagcgaaagctaaaaaaacattacagatg
caaaagggtttggtacagctgcaaaagggactggcggagagaatgaagaattctcctttg
ccgaagcagggtactaactcaacttcagaaggtagcacgcataccagagggccatcatcg
actaccactcctgctgtctctgcaggaacatcttctgcttcggcactgccacatgctgtc
tttcctggccttgatagtattgccaccattgaagctgttaagcgagctcaggagcgggca
gttaacatgggtggccgcctggatccagggtttggtccccttatcaatttatttccagga
cagacacacgcacagacgcctgttccacagaaaccggcgaagccccctgttctgcgtgtg
gatgcacttggaagggagattgatgaacatggaaatgtgattagtgtgactaaaccaagc
aatcttagtacattgaaggttaacatcaacaaacagaagaaggatgcttttcagattctt
aaacctcagctggaagtagatcctgaagaaaacccccattttgatccaaggatgggtatt
gataagaacaagattttgagacctaagcgtatgagtttccagtttgtggaggaaggtaaa
tggacaagggatgctgagaatttgaagttaaagagccaatttggtgaagcaaaagcaaga
gagctgaaggtgaagcaagcgcatctggcaaaggcaaaggatgatataaatccaaatttg
atagaggtatccgaacgtgccccaagaaaagagaagcccaaggagccaatcccggatgtt
gagtggtgggatgcgaatgtcctcatcaaaggcgaatatggcgacatagctgatggggca
attaccgatagcgatctgaagatagaaaaactcactcattacattgagcatccccgtccg
atagagccacctgcagaggcagcgcctccaccaccccaacctctgaaactgacaaagagg
gaacagaagaaactgcgaacccagaggcgtctagcaaaagaaaaggagaaacaggagatg
atcagacaagggttgcttgaaccaccaaaagcgaaggtgaaaatgagcaacctaatgaag
gttctcggggctgaagcaacccaggacccaacgaagctagaaaaagagatccgcacagca
gcagccgagcgtgaacaggctcacacggacaggaacgcagcaaggaagcttactcctgca
gagaaacgtgagaagaaagagaggaagctgttcgacgatccaacaacggttgagacgatt
gtatcagtgtacaagatcaacaagctatcgcatcctaaggcaagattcaaagtggagatg
aatgcaagacagaacaaactaacagggtgcagtgtgatgacggatgggatgagtgtggtt
gtggttgaaggtaagagcaaagcgataaagagatacgggaagctgatgctgagtcgaata
aactgggaagaggcggtgaagaaggaaggtgaggaaggagaagaagaagatgaagacgga
gaggagaatggtgggaacaacaagtgttggttggtttggcaaggaagtgtcgcgaaaccg
agtttccataggtttcatgtacaagagtgcttgaccgaatctgctgccaagaaagttttc
acggatgctggtgttgctcactactgggatctcgctctcaattacacagaagactaa
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