Eutrema salsugineum (saltwater cress): EUTSA_v10006997mg
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Entry
EUTSA_v10006997mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10006997mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10006997mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10006997mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EUTSA_v10006997mg
Coactivators
SAGA/TFTC/STAGA complex
EUTSA_v10006997mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
EUTSA_v10006997mg
STAGA complex
EUTSA_v10006997mg
TFTC complex
EUTSA_v10006997mg
SAGA complex
EUTSA_v10006997mg
SLIK complex
EUTSA_v10006997mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
18993150
NCBI-ProteinID:
XP_006416703
UniProt:
V4MTD6
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MAEAIPPSSLSPKPLQSPNPMEPSPPSSAPPPSSSQQHMTPPIPNSVNSAASPAMAVTTT
EGVIQNTSTNSQPNINPSPIPPVGAQIPSSSSLDQQTQSQQLGQTQQLQQQQQQNQQLPQ
QQQQQQQIMQQQISSSSIPQLSQQQQQILQQQQQQHMSPQQIPISNYQIAQSLQRSPSVS
RLNQIQQQQQQHQGQYGNVLRQQAGLYGTMNFGGSGSVQQSQQMGNPNMSRAALVGQSGH
LPMLNGAAGAAQMNIQPQLLAASPRQKTGLVQGSQFHQGSSGQQLQGMQAMGMMNLTSQM
RGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQSGMM
QNSLTHQQWLKQMSGIASPNSASFRLQQSQRQALLLQQQQLPSAQLHQNSMSLTQQQLSQ
MIHQQQQQSQLGQTQMNNSHQQQQMQQQPQQQMQQQQQQQMAINQQQPSPRMSSHAGQKS
VSLTGSQPDATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLL
EVADDFIDSVTSFACSLAKHRKSSILEPKDILLHLEKNLHLTIPGFSSEDKLQTKNVPTD
LHKKRLALLRALLESSKPETNATNSKETIRQGMVNPNGPTHLLRPSPSSEQLVSQTSGSH
ILQHMTRY
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctattcctccatcgtctttgtcaccgaaacctctacaatctcctaatccc
atggaaccttcccctccatcgtctgcacctccaccgtcgtcatcgcaacaacacatgaca
cctccgattcccaattccgtcaattcggcggcgtctccggcgatggcggtgacgacaacc
gaaggtgtaattcagaacactagtaccaattcgcaacctaacatcaacccgagtccgatt
ccacccgtcggagctcagatcccgtcgtcttcttcgttggatcagcaaacacagagtcag
caactcggccagactcagcaattgcagcaacagcaacagcaaaatcagcaattgcctcaa
caacaacaacagcaacaacagattatgcagcagcaaatctcttcgtcttcgattccgcaa
ttatcccagcaacagcagcagattcttcagcagcagcagcaacagcatatgagtccgcag
caaatcccaatttcgaattaccagatagctcaatctctccagcgatccccttctgtttct
cgccttaaccaaattcagcagcagcagcagcaacatcaggggcaatacggcaacgttttg
aggcagcaagctgggctgtacgggacgatgaactttggtggctcaggttctgttcaacag
agtcagcagatgggtaaccctaatatgtcgagggcagctttggttggccaaagtggtcac
ttgccaatgcttaacggtgctgctggagctgcacagatgaacattcaacctcaattattg
gcagcttcgccgaggcagaaaacggggctggttcaaggttcgcaatttcatcaaggaagt
tctggacaacagttacaggggatgcaagcaatgggaatgatgaacctgacctcgcaaatg
agaggtaatcctgctctctatgctcagcagcgaatcaacccagggcagatgagacagcaa
ttgtcacagcaaaacgctcttacttcgcctcaggtccagaacctccagagaacatcttct
ctcgcattcatgaatcctcagctatcgggtctggcccaaaatggacaatctggtatgatg
caaaactcgttgacgcatcagcaatggctgaagcaaatgtcgggaatagccagccccaat
tcagcatcattccgactccaacagagtcaaaggcaggctctactcttacagcagcagcaa
ttgccctctgctcagttacaccaaaactccatgtccttaactcagcagcaactatcacag
atgatacatcaacagcagcaacaatcacaattaggccagactcagatgaacaattcccat
caacagcaacagatgcagcaacaaccacaacagcaaatgcagcagcagcaacaacaacaa
atggcaataaaccaacagcagccatctccaaggatgtcgagtcatgcaggacagaaatct
gttagcttaaccggttcacaaccagatgctacacaatcgggtacaacaacaccaggtggt
agttcaagccaaggaacagaagcaacaaaccaattgctcggcaaaagaaagatacaggat
ctggtttcgcaggtggatgtacatgctaaattggatcctgatgttgaagacctccttttg
gaggtagcagatgacttcattgattcggtgacttcttttgcatgtagcttggctaagcat
cgtaaatcgtccatattggagcctaaggatatattactccacctagagaaaaacttgcac
ttgacaattcctggattctctagtgaggataaactccaaacaaaaaacgtaccaactgat
ctccacaagaagcgacttgcattgttgcgtgctttactggaatcctcaaaaccggagacg
aatgcaaccaattccaaggaaactattagacaagggatggtaaacccaaacggtccaacc
catctcttaaggccatcaccaagttcagagcaattggtttcgcagacatccggttctcac
atattacagcatatgacacgctattaa
DBGET
integrated database retrieval system
