Eutrema salsugineum (saltwater cress): EUTSA_v100070381m
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Entry
EUTSA_v100070381m CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EUTSA_v100070381m
Enzymes [BR:
eus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EUTSA_v100070381m
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Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
18993884
NCBI-ProteinID:
XP_006417522
UniProt:
V4KDR2
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MFLSLFEIAISQNQSPDPESTQVLQLHYEDRHVVLDNGIFQLTLSSPEGFVTGIRYNNIE
NVLAYNGGEHDRGYWDLVWNFPGKKTKKTKGTLDRIEATKMEVITQSDEKIEISFSRTWN
ASSTLAVPVNIDKRFVMLRNSSGFYTYAIFERLKGWPAVELDNIRLAFKLNKDKFHYMAI
SDERQRYMPQADDRIPPRGKPLAYPEAVQLLDPTNPEFKGEVDDKYAYSMESKDIKVHGW
ISTNDSVGFWQITPSNEFRSSGPLKQFLGSHVGPTNLAIFHSTHYVGADLIMKFEEGEAW
KKVFGPVFIYLNSFPQGVDPLLLWHQAKNQTKIEEQKWPYNFTTSSDFPASDQRGCVSGR
FLVRDRYISSEDIPANGSYVGLAAPGDAGSWQKEYKGYQFWSKADEKGYFSINNVRSGRY
NLYAFALGFIGDYHNDTVFDISPGSNISLGDLVYEPPRDGVTLWEIGVP
NT seq
1409 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgtctttatttgaaattgcaatctctcaaaaccaaagtcctgatccagaatca
acacaagtcttgcaattacattacgaagatcgacatgtggttttggacaatggaattttt
caattaactttgtccagtccggagggatttgtcactggaatccggtacaataatattgaa
aatgtgcttgcctacaacggaggtgaacatgatagaggttactgggacttagtgtggaac
ttcccagggaaaaaaactaaaaagaccaaaggcacactagacaggattgaagcaacaaag
atggaagtgataacgcagagtgatgaaaagatagagatatcgttttcaaggacatggaat
gcttcttcaacactggctgttcctgtgaatatagacaagaggtttgtaatgctgcgaaac
tcgtccgggttctacacttacgccatcttcgagcggttaaaagggtggcctgctgttgaa
cttgataatattcgattagcatttaagctaaacaaggacaagtttcattatatggcgatt
tcagatgagaggcaaaggtacatgcctcaagcagatgatcggattcctcctcgaggtaaa
cctcttgcttatcccgaggccgttcaacttctcgaccctaccaatcctgagttcaaagga
gaggtggatgacaagtatgcgtattcaatggagagtaaagacataaaagttcatggatgg
ataagcacaaatgactcagttggtttctggcaaatcactccaagcaacgagttccgttct
tctggtcctctcaagcaattcctaggctcccatgtcggtccaaccaacctcgcgatattt
cacagcactcactatgttggagcagatctgatcatgaaatttgaagaaggtgaagcatgg
aagaaggtgtttggacctgtcttcatttatctcaactcttttcctcaaggagttgatcct
ttgttgctctggcatcaagccaagaaccagacaaagattgaggaacagaagtggccttat
aacttcaccacttcaagtgattttcctgcatctgaccaaagaggatgtgttagcggcaga
ttcctcgttagagaccgatacataagtagtgaggatatacctgcaaatggttcctacgtg
ggcttggctgcgccaggagatgctggctcatggcaaaaagaatacaaaggttatcagttc
tggtcaaaagcagacgaaaagggatatttttctatcaataatgtgagaagtggtcgttac
aatctctatgcatttgctctgggattcatcggtgattaccacaacgacaccgttttcgac
atttctccaggttcaaatatcagcctaggcgacttggtgtatgaacctccaagagacggt
gtaactctatgggaaatcggtgtaccgga
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