Eutrema salsugineum (saltwater cress): EUTSA_v10007079mg
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Entry
EUTSA_v10007079mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
eus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10007079mg
03015 mRNA surveillance pathway
EUTSA_v10007079mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10007079mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10007079mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
18993555
NCBI-ProteinID:
XP_006417152
UniProt:
V4KCT2
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MEFHFQVLEPRCPRSVDGISIDPEPNWNFESLVSEIESVEKKLNSFSSFPQQFTNTTLRM
GRSGGGRGFVMRVLEDEMESDEDEESDEEEEEEDHSQICTKGKRFACDELYLSDESDDEF
DCEPESFLMSKMGLAENALYEVINDHQTEVKEDIRNQVSVVETKILNEIETSRSALARVE
KYSETRKEVERKLDLQYERKVAEALDNHMTAVQREHQIKSQIEERKLRSEEAQEEARRRE
RALKEEKIRQEKARAEAEMLAKTRAEEAKKEAERKASKEAAEKEVADRKAAEQKLAEEKA
VTERASVAGSPATSNAQAGGISIQAAESALTLEKHRLKKLEELEAMNQSLKSRSNEDFSS
FEKHIVRVIKQIRGTKENVSTKSIEIVKILKDARCPVSISIATFAKKMVSAKDPFAGGYV
IVYVTSQFPQAMDILLAEFHKACIYTVPKHIVNSQSAWDSDAYQHLDSVMRLYGALVQTD
IRGGNATNIHGIEQGWAWLARFLNKISANNRVTATALNAFLQTAGFGLHQRYKSQFLKVL
NVVREHFLPKLRAKKDTSDLQAIILDITTYIDDRMYLKEPEGRALKTNILSAEITAEVDQ
QSHNQHYQSHNQHYQRNYYRDY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcattttcaagttttggaacctcgttgtcccagaagcgtcgatgggattagc
attgaccctgagcctaattggaatttcgaaagcttagtctctgaaatcgagtctgttgaa
aagaagctcaattccttttcaagctttccccagcaattcaccaacacaaccttacggatg
ggaaggagtggtggtggaagaggatttgtaatgcgtgtattagaagatgagatggagagt
gatgaagatgaagagagtgatgaagaagaagaagaagaagatcatagtcaaatctgtaca
aaggggaaacgtttcgcttgtgatgagctatacttgagtgatgaatctgatgatgagttt
gactgtgaacctgagtcctttttgatgagtaagatgggtctggctgagaatgctctatat
gaggtgatcaacgaccaccaaaccgaagttaaggaagatattaggaatcaagtgtcagtt
gttgaaacgaaaatactgaacgagattgaaacatctcgctctgcgttagcccgggttgaa
aagtacagcgaaactagaaaagaagttgaacggaaacttgatctccaatatgagcgaaaa
gttgctgaagcacttgataaccatatgactgcagtccagcgtgaacatcaaattaaatcg
caaatagaagaaagaaaattaaggagcgaggaagctcaggaggaggccaggaggagagaa
agggcacttaaagaagagaaaatacgtcaagaaaaagctcgtgcagaggctgaaatgcta
gcaaaaaccagagctgaagaagcaaagaaagaagctgagagaaaggcatccaaagaagca
gctgaaaaagaagtagcagatcgcaaagctgctgaacaaaaacttgcggaagagaaggct
gtgacagagagagctagtgttgctggtagtccagctacatcgaatgctcaagctgggggt
atatcaatccaagctgcagaaagtgctttgacattggagaagcatagattgaagaagctc
gaagaattagaagcaatgaaccagtcgctaaagtcgcgttcaaatgaggactttagcagc
tttgaaaagcatattgtgagggtgataaagcaaataagggggacaaaggagaatgtaagt
acgaaaagcattgaaattgtcaaaatattaaaggacgctcgctgtccagtgtccatcagt
attgcaacttttgcgaagaagatggtctccgctaaagacccttttgcaggcggctacgtc
attgtttacgtcacctcgcagtttccacaagctatggatattcttcttgctgaattccac
aaagcttgcatttacacagtcccgaaacacattgttaactcacagtcagcttgggactca
gacgcatatcaacacctagattccgtaatgagactttacggtgcacttgtccagaccgat
attcgcggcggaaatgctactaacattcatgggattgaacaaggatgggcttggcttgcc
cggttccttaacaaaatctcagccaacaacagagttaccgcaacagctttaaatgcattt
ctccagacggcagggtttggtcttcatcagaggtacaaatcacagttcttgaaagtattg
aacgttgtaagagagcatttcttgccgaaattgagagcgaaaaaggatacgtcggatcta
caagcgatcatactcgatatcacgacgtacatagatgatcggatgtatcttaaggaacct
gaaggaagggctctgaagactaatattttgtcggcggagattactgctgaagtagatcag
cagagccacaatcaacattaccagagccacaatcaacattaccagaggaattattacaga
gactattag
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