Eutrema salsugineum (saltwater cress): EUTSA_v10007141mg
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Entry
EUTSA_v10007141mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00906
Carotenoid biosynthesis
eus01100
Metabolic pathways
eus01110
Biosynthesis of secondary metabolites
Module
eus_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
EUTSA_v10007141mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
EUTSA_v10007141mg
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Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Pyr_redox_2
GIDA
Thi4
GDI
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
18994192
NCBI-ProteinID:
XP_006417876
UniProt:
V4KY19
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MNLCIQSPVKCDGRSSLFSALKTSNFSEERLTTSRFWGFHGRNRKKNRMFAVRSVSSSAV
GTVDETKRDEISGGESRVYDAIVIGSGIGGLVAATQLAVKEARVLVLEKYLIPGGSSGYY
ERDGYTFDVGSSVMFGFSDKGNLNLITQALKAVGRKMEVIPDPTTVHFHLPNNLSVQIHR
EYDDFIAELTSKFPHEKEGILGFYGDCWKIFNSLNSLELKSLEEPLYLFGQFFQKPLECL
TLAYYLPQNAGDIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGGIN
YPVGGVGGIAKSLAEGLVDQGSEILYKANVKSIILDDGKAVGVRLADGREFFAKTIISNA
TRWDTFGKLLKEEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDNWK
NLEEPYGSIFLSIPTILDPSLAPNGRHILHIFTTSSIEDWEVRLVLGELDQA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtgtattcaaagtcccgtgaagtgtgatggtcgaagttccttgttctccgca
ctgaagacttcgaatttcagtgaggagaggcttactacatcaaggttctgggggtttcat
ggtcgaaatcggaagaagaatcgtatgtttgcagtgagatctgtttcttcaagtgcggta
ggtaccgtagacgagacgaagagagatgaaattagtggaggagagagtcgtgtgtacgac
gccattgtcatcggctccgggattggaggattggtcgctgcgactcagcttgctgttaaa
gaagctagggttttagttctcgagaaatatctgattcctggtgggagctctggttattac
gaaagagatggatatactttcgatgttggctcttctgtgatgtttggtttcagcgataag
gggaatctaaacttgataactcaggctttgaaggcagttggtcgtaagatggaggttata
cctgatcctaccactgtccatttccatcttcccaataacctttctgttcagattcataga
gaatacgatgatttcatcgctgaacttacgagcaagtttccccacgagaaggaagggatc
cttggattctatggcgattgctggaagatcttcaactcattgaactctctggaactaaag
tcactagaagagcctctctacctttttggacagttctttcagaagccgcttgaatgcctg
acactcgcttattacttgccccaaaatgctggggatatagctcggaagtacataaaggat
cctcaattattgtccttcattgatgcagagtgtttcattgtgagcacagtcaatgctttg
cagacgccgatgatcaatgcaagtatggttttatgtgacaggcactatggaggaattaac
taccctgttggtggtgttggtgggattgccaagtctttggcagaaggacttgttgatcaa
ggcagtgaaatactctacaaggctaatgtgaaaagtattatacttgatgatggaaaggct
gtcggtgtaaggctagcagatggaagagaatttttcgctaaaacgataatttcaaatgct
acaagatgggatacgtttgggaagctgttaaaagaagaaaaacttccaaaagaagaagaa
aatttccagaaagtctatgtcaaggctccatcatttctttcaatccacatgggtgttaaa
gcagaggttctccctccagatacagattgccatcattttgtgcttgaggacaattggaag
aatctggaggaaccttatggcagtatcttcctcagcattccaaccattcttgatccatcc
ttagccccaaatggtcgacatatactgcacatatttacaacttcttccatcgaggattgg
gaggtaaggctggtcttaggagagttagaccaagcatga
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