Eutrema salsugineum (saltwater cress): EUTSA_v10007215mg
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Entry
EUTSA_v10007215mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10007215mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10007215mg
Spliceosome [BR:
eus03041
]
Complex C
Other components
Step II factors
EUTSA_v10007215mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD_LRWD1
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_SCAP
PQQ_2
Motif
Other DBs
NCBI-GeneID:
18993821
NCBI-ProteinID:
XP_006417451
UniProt:
V4KWR8
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MDLIQSYDEEAVSSSPESSPPRILKAKSSAPEVDDTALALTVANVNQSKSNPINPTQHVV
AFNPTYEQLWAPICGPAHPYAKDGIAQGMRNHKLGFVEDASIGSFVFDEQYNTFHKYGYA
ADPSGMNYVGDVEALKQNDGVSVYNIPQSEQKRRKLEKNKEEREGEEKKEELEPEADNPA
TEAWLLKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQQGEAKGEHYADKSTFH
GKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLLLSAG
MDSKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGTKFLTAGYDKNIKYWDTETGQVIS
TFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEITQEYDQHLGAVNTITFVD
NNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIY
STRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC
HNGVCIGAEWHPLEQSKVATCGWDGLIKYWD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggatctgattcagtcctacgacgaggaagccgtatcttcctcgccggaatcttcgccg
cctcgtattttgaaggcgaagtcatcggcgccggaggtagacgatacggcactggctctc
acagtggctaacgtgaatcagtcgaagtcgaatccaatcaatccaacccagcacgtcgtc
gcgtttaaccctacttatgagcagctttgggctccgatttgcggccccgcgcatccgtac
gccaaagacgggatcgcacaggggatgcggaaccacaagctagggtttgtggaggacgcc
tcgattggctccttcgtgttcgacgagcagtacaacacttttcacaagtacggttacgcg
gcggatccgtccgggatgaattacgtcggcgacgtggaggccttgaagcagaacgacggc
gtttctgtttataatataccgcagagcgagcagaagcggaggaagcttgagaagaacaaa
gaggagagagaaggggaagagaaaaaggaagagcttgagccggaggctgataatcctgcg
acggaggcgtggcttttgaagaataggaaaagcccctggtcgaggaagaaggaggtggtt
cagggagagttgacggaggagcagaagaaatatgcagaggaccacgcgaagaagaaggaa
gagaagggacaacaaggcgaagccaaaggagagcattacgcggacaagagcactttccat
ggcaaggaggagaaagattatcaaggcaggtcatggattgaggctcctaaagatgcaaag
gcaaacaacgatcactgctacattccaaaacgtctggttcatacatggagtggtcacacg
aaaggtgtttctgctattcggttcttccccaagcacgggcatttgcttctctctgcaggt
atggattctaaggttaagatttgggatgtgtacaactctggtaaatgtatgaggacttac
atgggtcacgccaaagctgtgagggatatttgcttctctaatgatgggactaagttctta
actgctggatatgataagaacattaagtattgggacacggaaactgggcaagttatatcg
actttctcgactgggaagattccgtatgtggttaagctgaatccagatgatgataagcag
aacattttgttggctggtatgagtgataagaagattgtgcagtgggatattaatacaggg
gagattacgcaagagtatgaccagcacttgggtgctgttaatacaatcacatttgtggac
aacaacagaagatttgtcacatccagcgatgacaagtctctccgtgtgtgggagtttggg
ataccagtggtaatcaagtatatcagtgaacctcatatgcactctatgccatccatttca
gttcatccgaatggaaattggcttgcggcacagagtttggataaccagattctgatctac
agtaccagagaaaggtttcagctaaataagaagaagaggttcgcaggccacattgttgcc
ggttatgcatgccaagtgaatttctcgccagatggacggtttgtaatgtcaggagatggt
gagggtaagtgctggttttgggactggaagagttgcaaagtctttaggactcttaaatgt
cacaatggagtatgcatcggagcggaatggcatcctttggaacagagcaaagtggcaaca
tgcggttgggacggcttgattaagtactgggactaa
DBGET
integrated database retrieval system