Eutrema salsugineum (saltwater cress): EUTSA_v10007291mg
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Entry
EUTSA_v10007291mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10007291mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10007291mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10007291mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EUTSA_v10007291mg
Coactivators
SAGA/TFTC/STAGA complex
EUTSA_v10007291mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
EUTSA_v10007291mg
STAGA complex
EUTSA_v10007291mg
TFTC complex
EUTSA_v10007291mg
SAGA complex
EUTSA_v10007291mg
SLIK complex
EUTSA_v10007291mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
18994372
NCBI-ProteinID:
XP_006418077
UniProt:
V4KF85
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSIVPKETIEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD
VDGALNLRNLEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEV
VCHWLAIEGVQPAIPENAPLEVIRAPAENKIHEQKDGPLIDVRLPVKHVLSRELQLYFQK
IAELAMSKSNPALFKEALVSLASDSGLHPLVPYFTNFIADEVSRGLNDFVLLFNLMHIVR
SLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFSDNHWELRDFTANLVALILKRFGNTY
ITLQSRLTKTLVNALLDPKKALTQHYGAIQGLAALGHNVVRLLILSNLEPYLSLLEPELD
AEKQKNQIKSYEAWRVYGALLRAAGLCVHDRLKIFPNLPSPSPSFLHKGKGRIIKTEPLK
RKLNVDSSENRSPQKRLITTDGLQSQHDSGLAPMQEDKPAGNENPPQNSVQPSSSEQTSD
ASESERRNARGKEGGKGRRAITKKAILDQIWKDDLDSGRLLLKLYQLYGERVLPFIPCTE
MSVFI
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgtacctaaggaaacgattgaggttatagcacaaagtattgggattaccaac
ttgttaccggaggctgctcttatgcttgctcccgatgttgagtatcgtgttcgagagatc
atgcaggaagctatcaaatgcatgcgtcactcaaagagaactactttaacagcttcagat
gtagatggtgctctcaatttaaggaaccttgagccgatatatggctttgcctctggagga
ccatttcgttttagaaaagcaattgggcatcgcgatttgttctacactgatgacagagag
gtggatttcaaagatgtaattgaagccccactaccaaaagctccccttgatactgaggtt
gtctgtcactggctagctattgaaggagtgcagccagcgataccagaaaatgctccttta
gaagtcattagagcacctgcagaaaacaaaatccatgaacaaaaggacggacctcttatt
gacgttaggctaccagtgaagcatgtactgtctagagaacttcagttatacttccaaaag
attgctgaacttgcaatgagcaagtcaaatcctgctctgtttaaagaggcattagtgagc
ctggcctcagactcaggacttcatcctctagttccatattttacaaatttcattgctgat
gaggtatcacgtggtttaaatgacttcgtactcctgtttaatctaatgcacattgttagg
agtcttctacagaatcctcatatacacatagaaccttatctgcaccagttgatgccatct
gttgtaacatgccttgtatcgaggaagcttggaaatagattttccgacaaccactgggaa
cttagagattttacggcgaatctggttgcactgatattgaaaaggtttggaaacacttac
attactcttcagtctcgtcttaccaaaaccctagtcaatgcacttttggacccaaagaag
gctttgactcagcactatggtgcaattcaaggactggcagctttggggcataatgtcgta
cgccttcttattctgtcaaatctcgaaccgtatctaagtcttctcgaaccagaattggat
gctgagaagcaaaagaaccagataaagagctacgaagcttggcgtgtttatggagcgttg
ctgcgtgctgcaggcctgtgtgtacatgaccggcttaaaatcttcccaaatttaccatct
ccttcaccaagtttcctccataaagggaagggaagaataatcaaaactgagccacttaag
cggaagctgaatgtagattcttcagaaaaccggtcaccgcagaaaagattgataacaaca
gatggtttacaatcgcaacatgacagcggtctagctccgatgcaagaagataaaccggca
ggaaatgaaaatccgccacaaaactctgttcaaccatcctcatcagaacaaacatctgat
gccagcgaatctgaaagaagaaacgcaagggggaaagaaggcggcaagggtcgtcgggct
attacgaagaaagcaatacttgatcagatatggaaagatgatcttgattccggacgactc
ttgctcaaactgtaccaactttatggtgaaagggttcttccttttatcccttgcactgag
atgtcagtattcatctaa
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