Eutrema salsugineum (saltwater cress): EUTSA_v10007366mg Help Entry EUTSA_v10007366mg CDS       T02985                                  Name (RefSeq) hypothetical protein   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism eus  Eutrema salsugineum (saltwater cress) Pathway eus03040   Spliceosome eus04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:eus00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     EUTSA_v10007366mg   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     EUTSA_v10007366mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:eus03041]     EUTSA_v10007366mg    04121 Ubiquitin system [BR:eus04121]     EUTSA_v10007366mg    03400 DNA repair and recombination proteins [BR:eus03400]     EUTSA_v10007366mg Enzymes [BR:eus01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      EUTSA_v10007366mg Spliceosome [BR:eus03041]  Complex B   Other components    Prp19 complex     EUTSA_v10007366mg  Complex C    Prp19-CDC5 complex     EUTSA_v10007366mg Ubiquitin system [BR:eus04121]  Ubiquitin ligases (E3)   U-box type E3    EUTSA_v10007366mg DNA repair and recombination proteins [BR:eus03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     EUTSA_v10007366mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_EIPR1 eIF2A Beta-prop_Aladin NBCH_WD40 Beta-prop_DCAF4 zf-Nse U-box WD40_like PROPPIN PAS_11 Beta-prop_Nup120_160 PUMA_CC Motif Other DBs NCBI-GeneID:  18994417 NCBI-ProteinID:  XP_006418122 UniProt:  V4KFE0 LinkDB All DBs Position Unknown AA seq 522 aa AA seqDB search MNCAISGEVPEEPVVSTKSGLLYEKRLIERHISDYGKCPVTGEPHTITDIVPIKTGKIVK PKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARQLLAEAERHLPAAPEVATDNAGLSNGKRAADDGELGPDSKKMRLGISAQVITEL TDCNAALSQQRKKRQIPPTLASIDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDAIATG GIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGSSEDGNYA CRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDDSEKVDYTAAA FHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHTGEITSVSFSENGYFLATAALDGVRL WDLRKLKNFRTFEFPDANSVEFDHSGSYLGIAASDIRVFQTASVKAEWNPIKSLPDLSGT GKATCVKFGPDAKYIAVGSMDRNLRIFGLPGDDNTEDSAQDS NT seq 1569 nt NT seq  +upstreamnt  +downstreamnt atgaactgtgcaatttccggcgaagtcccggaggagcctgtagtttcgacgaagtcgggt ttgctatacgagaagcggctaatcgagaggcatatatcggattatgggaaatgcccggtt actggtgaaccacataccataaccgacattgttcctatcaaaactggaaagattgtaaaa cctaaaccattacacacagctagcatccctggattgctcggaacgttccaaactgaatgg gacagtttgatgctatcaaattttgctctggaacagcaactgcataccgcgaggcaagag ttaagtcatgctttatatcagcatgatgctgcttgtcgtgtgattgcgaggcttaaaaaa gaaagagacgaagcacgacaattgcttgcagaggctgaaaggcacttacccgcagccccc gaagttgccacagacaatgctggtcttagtaatggtaaacgagctgccgatgatggtgaa ctggggcccgattcaaagaaaatgcgacttggaatttcggctcaagttataacagaattg acagattgcaatgctgctctttcccagcagcgtaaaaagagacagatccctccaacattg gcatcaattgatgctctggaaaagttcacccaactctcaagccacccactccacaagacc aacaaacctggtatattttcaatggacatcctacattccaaggatgccattgctaccgga ggaattgatacaactgccgttctctttgatcgtccttcaggacaaatcttgtcaacgctg actggtcattcaaagaaggttactagtattaagtttgtaggtgacactgatcttgttttg actgcttcatcggacaagacagtccgtatctgggggagttccgaggatgggaactatgcc tgtagacatacattgaaagatcactctgcagaggtgcgagctgtaactgtccatgcaacg aataaatactttgtgtcggcatcgcttgacagtacctggtgcttctatgatctgtcctcc ggtttatgccttgcccaggtaacagatgattccgaaaaagtggattacacggctgctgct ttccatcctgatggtctcattctgggaactggtaccgctcaatctattgtcaagatttgg gatgttaagagccaggcaaatgtggcgaagtttggtggacacactggagaaatcacatct gtatcattttctgaaaacggctatttcctcgcgactgctgctctggatggtgttaggttg tgggacctgcgcaagttaaagaacttccgaacatttgaatttccagatgcaaactcagtg gagtttgaccatagcggatcttaccttggcattgctgcttcagatataagagtattccaa acggctagtgttaaagcagagtggaacccaatcaagtctcttcccgatctatccggtaca ggtaaagcaacatgtgttaagttcggtccggatgcaaaatacatagcagtcggctcaatg gaccgtaatctcagaatatttggtttacctggagatgacaataccgaagattctgcacaa gattcatga

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