Eutrema salsugineum (saltwater cress): EUTSA_v10007981mg
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Entry
EUTSA_v10007981mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eus03016
]
EUTSA_v10007981mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EUTSA_v10007981mg
Transfer RNA biogenesis [BR:
eus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EUTSA_v10007981mg
Prokaryotic type
EUTSA_v10007981mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
18993896
NCBI-ProteinID:
XP_006417534
UniProt:
V4L0P9
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MSGNLKHPLDSSASQESLERLSKVARFDGFSDEEEGEEAEERQGLVVSEPELSMNPRVQR
YLVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHALSNVCH
VDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMVIDVRCVPSNYHARYKARERT
YFYRLLSGSDPLSILEKDRAWHVPEELDLRSMQEACRVLVGTHDFSSFRAAGCQAKSPIR
SLDELNVTEVPSTPYFPSITERTPSYLNNGDPLACSSQAKTETAGVSTDGGDTFGVRRRH
RCYVVTARGRAFLYHQVRLLVAALKCVGTGELTVSDVERILKAKTVTAAKPMAPACGLYL
ARVKYEFP
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtaatctgaagcatcctcttgattcttcagcttctcaagaatcactcgagaga
ctttcaaaggttgcgagattcgacggattcagtgacgaagaagagggagaagaagcagag
gaacgacaaggattggtcgtctcggagccggagctatctatgaacccaagagtgcagcgt
tacttggtagctattgagtatatcggaactcgcttctcggggtcacaacagcaagctacg
gaccgcacggtcgtcggcgtattgcaggaggcttttcataagtttattggccagccagtt
aagatcttctgctcaagtcgaacggatgcaggagtgcatgcactgtctaatgtttgccat
gtggatgttgaacgcatcagtaaaagaaagcccggtgaagtgttaccacctcatgaacct
ggtgtggtccagagagctgtgaaccactttttacagagaaatgacggtgatgttatggtg
attgatgttcggtgtgtcccaagtaattatcatgccagatataaggcccgggagcgcaca
tacttctaccgcttgctatcggggtcggatcctttatccatcctcgaaaaagaccgtgcc
tggcatgttcctgaggagttagatcttcgctcgatgcaggaagcatgcagagttcttgtt
ggaactcatgattttagctccttcagggcagctggttgccaggcaaagtcacctatcaga
tctttagatgaactaaacgtcactgaggtaccatcaactccatattttccatctatcacg
gaaaggacgccgagttacctaaacaatggagatcctctcgcatgttccagtcaagccaag
actgagactgctggtgtttctacagatggtggtgatacttttggtgtaaggagacgacac
cgctgctatgtagtaacagctcgtggccgcgcttttctttaccatcaggttcgactgctt
gtagcagcacttaaatgtgtaggcacgggagagttgacggtctcagacgttgaacgaatc
ctgaaggcgaagacagtgactgcagccaaacccatggctcctgcatgtggtctgtatctc
gcgcgtgtcaagtatgaatttccatga
DBGET
integrated database retrieval system
