Eutrema salsugineum (saltwater cress): EUTSA_v10007982mg
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Entry
EUTSA_v10007982mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10839
UV excision repair protein RAD23
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03420
Nucleotide excision repair
eus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EUTSA_v10007982mg
09124 Replication and repair
03420 Nucleotide excision repair
EUTSA_v10007982mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
eus03051
]
EUTSA_v10007982mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10007982mg
Proteasome [BR:
eus03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
EUTSA_v10007982mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
EUTSA_v10007982mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
CUE
Rad60-SLD
UBA_Ucp12
TECR_N
UBA_3
Dsc3_N
Rad60-SLD_2
UBA_RAD5A
Ubiquitin_4
DUF515
Motif
Other DBs
NCBI-GeneID:
18993270
NCBI-ProteinID:
XP_006416841
UniProt:
V4KV39
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MKLNVKTLKGSQFEIRVQPTDTIMAVKKNIEDTQSKDNYPCGQQMLIHNGKVLKDETTLV
ENKVTEEGFLVVMLSKSKTASSAGPSSAHATSTTTSTISSTTPAASATQSIAVPASNSSL
VQEQPPAQSDTYGQTASTLVSGSSIEQTVQQIMEMGGGSWDKDTVTRALRAAYNNPERAV
DYLYSGIPETVAVPETNISGVGSGADLAAPPASGGPNSSPLDLFPQEAVSDAAAGDLGTL
EFLRSNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSD
GDMDIFDQPEQEMPHAVNVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLE
NSADFED
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgttaagactctcaagggtagccaatttgaaattagggttcagcccacc
gacacgataatggcggtgaaaaagaatattgaagatacacaaagcaaggacaactatcca
tgtgggcagcaaatgttgattcacaatggaaaggttttgaaagatgaaactaccttggtg
gagaacaaggttaccgaggagggttttctcgttgtcatgcttagcaagagcaaaactgca
agttcagctggtccatcttctgctcatgctacttccaccacgacatctactatatcttca
actacgcctgcagcttcggcgacccagtctatagctgtgccagcttcaaattcctctctt
gttcaagaacaaccgccggcacaaagtgacacctatggtcaaacggcttcaactttagtt
agtggcagtagtattgagcaaacggtacaacaaataatggaaatgggaggaggcagctgg
gacaaagacacagttactcgtgcacttcgtgcagcttataacaaccctgagagagcagtg
gattatctatattctggaattcctgaaaccgtagctgttccagaaactaacatatcaggg
gtaggatctggcgcagaccttgccgctcctcctgcctctggaggacctaattcatctcct
ttggatttgtttccccaggaagcagtgtctgatgctgctgctggagatcttggaacgctt
gaattcctcagaagcaatgatcagttccaacaattacgatccatggtcaattccaacccc
cagattctgcagcctatgcttcaagagctcggaaagcagaacccccaacttctgaggcta
attcaagagaaccaagccgaatttcttcagttgctcaacgagccctatgaaggatctgac
ggggatatggatatattcgaccaacctgagcaagaaatgccccatgcagtcaacgttacc
cctgcagagcaggaggcgattcagcggcttgaggcaatgggatttgacagagcattagtt
atagaagccttccttgcatgtgaccgtaacgaggaattggctgcaaactatctgctagag
aactcagcagattttgaagactaa
DBGET
integrated database retrieval system
